BLASTX nr result
ID: Coptis25_contig00011118
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00011118 (814 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ... 326 4e-87 ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ... 325 1e-86 ref|XP_003534113.1| PREDICTED: probable cyclic nucleotide-gated ... 319 4e-85 ref|XP_003548318.1| PREDICTED: probable cyclic nucleotide-gated ... 317 3e-84 dbj|BAF95185.1| cyclic nucleotide gated channel [Malus x domestica] 313 3e-83 >ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic-like [Glycine max] Length = 766 Score = 326 bits (835), Expect = 4e-87 Identities = 156/208 (75%), Positives = 181/208 (87%) Frame = -2 Query: 813 RFHWAATRGVNEEVLLENFPEDLQREIRRHLFNFIKKIRILALMDEPILDAICERLRQKL 634 R++WAATRGVNEE+L+EN PEDLQR+IRRHLF F+KKIR+ ALMDEPILDAICERLRQK Sbjct: 559 RYNWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRLFALMDEPILDAICERLRQKT 618 Query: 633 YIKESKILYYGGVVDKMIFIVRGKLVSVDVDGNNAPLSEGDICGEELLTWCLDHSSTSKD 454 YIK SKIL GG+V+KM+F+VRGKL S+ DG PLSEGD CGEELLTW L+HSS S D Sbjct: 619 YIKGSKILSQGGLVEKMVFVVRGKLESIGEDGTRIPLSEGDSCGEELLTWYLEHSSVSTD 678 Query: 453 GKKIRVPGQRFLSNRTVTCLTNVEAFSLRASDLEQVTALFPRFLRSPRIQGAIRYESPYW 274 G+K+R+PGQR +SNRTV CLTNVE+FSL ASD+E+VT LF RFLRSP +QGA+RYESPYW Sbjct: 679 GRKVRLPGQRLVSNRTVRCLTNVESFSLSASDIEEVTILFTRFLRSPCVQGALRYESPYW 738 Query: 273 RGLAATRIQVAWRYRKKCLNRVETSKSE 190 R LAATRIQVAWRYRKK L+RV +S S+ Sbjct: 739 RSLAATRIQVAWRYRKKRLSRVNSSPSD 766 >ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic-like [Glycine max] Length = 766 Score = 325 bits (832), Expect = 1e-86 Identities = 155/208 (74%), Positives = 181/208 (87%) Frame = -2 Query: 813 RFHWAATRGVNEEVLLENFPEDLQREIRRHLFNFIKKIRILALMDEPILDAICERLRQKL 634 R++WAATRGVNEE+L+EN PEDLQR+IRRHLF F+KKIR+ ALMDEPILDAIC+RLRQK Sbjct: 559 RYNWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRLFALMDEPILDAICDRLRQKT 618 Query: 633 YIKESKILYYGGVVDKMIFIVRGKLVSVDVDGNNAPLSEGDICGEELLTWCLDHSSTSKD 454 YIK SKIL GG+V+KM+F+VRGKL S+ DG PLSEGD CGEELLTW L+HSS S D Sbjct: 619 YIKGSKILSQGGLVEKMVFVVRGKLESIGEDGTRIPLSEGDSCGEELLTWYLEHSSVSTD 678 Query: 453 GKKIRVPGQRFLSNRTVTCLTNVEAFSLRASDLEQVTALFPRFLRSPRIQGAIRYESPYW 274 G+K+R+PGQR +SNRTV CLTNVE+FSL ASD+E+VT LF RFLRSP +QGA+RYESPYW Sbjct: 679 GRKVRLPGQRLVSNRTVRCLTNVESFSLSASDIEEVTILFTRFLRSPCVQGALRYESPYW 738 Query: 273 RGLAATRIQVAWRYRKKCLNRVETSKSE 190 R LAATRIQVAWRYRKK L+RV +S S+ Sbjct: 739 RSLAATRIQVAWRYRKKRLSRVNSSPSD 766 >ref|XP_003534113.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic-like [Glycine max] Length = 781 Score = 319 bits (818), Expect = 4e-85 Identities = 154/207 (74%), Positives = 177/207 (85%) Frame = -2 Query: 813 RFHWAATRGVNEEVLLENFPEDLQREIRRHLFNFIKKIRILALMDEPILDAICERLRQKL 634 R++WAATRGVNEE+LLEN PEDLQR+IRRHLF FIKK+RI AL+DEPILDAICERLRQK Sbjct: 565 RYNWAATRGVNEEMLLENLPEDLQRDIRRHLFTFIKKVRIFALLDEPILDAICERLRQKT 624 Query: 633 YIKESKILYYGGVVDKMIFIVRGKLVSVDVDGNNAPLSEGDICGEELLTWCLDHSSTSKD 454 YIK SKI Y GG+V+KM+FIVRGKL SV DG +APL EG +CGEELLTWCL+H SK Sbjct: 625 YIKGSKIFYDGGLVEKMVFIVRGKLESVGEDGISAPLYEGSVCGEELLTWCLEHPLASKG 684 Query: 453 GKKIRVPGQRFLSNRTVTCLTNVEAFSLRASDLEQVTALFPRFLRSPRIQGAIRYESPYW 274 K R+P Q+ +SNRTV CLTNVEAFSLRA+DLE+VT+LF RF RSPR+QGAIRYESPYW Sbjct: 685 CGKARIPRQKLVSNRTVGCLTNVEAFSLRAADLEEVTSLFARFFRSPRVQGAIRYESPYW 744 Query: 273 RGLAATRIQVAWRYRKKCLNRVETSKS 193 R AAT IQVAWRYR KCL+R +T++S Sbjct: 745 RCFAATSIQVAWRYRMKCLSRADTTRS 771 >ref|XP_003548318.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic-like [Glycine max] Length = 778 Score = 317 bits (811), Expect = 3e-84 Identities = 152/207 (73%), Positives = 177/207 (85%) Frame = -2 Query: 813 RFHWAATRGVNEEVLLENFPEDLQREIRRHLFNFIKKIRILALMDEPILDAICERLRQKL 634 R++WAATRGVNEE+LLEN PEDLQR+IRRHLF FIKK+RI AL+DEPILDAICERLRQK Sbjct: 562 RYNWAATRGVNEEMLLENLPEDLQRDIRRHLFTFIKKVRIFALLDEPILDAICERLRQKT 621 Query: 633 YIKESKILYYGGVVDKMIFIVRGKLVSVDVDGNNAPLSEGDICGEELLTWCLDHSSTSKD 454 YIK SKILY GG+V+KM+FIVRGKL SV DG +APL EG +CGEELLTWCL+H SK Sbjct: 622 YIKGSKILYDGGLVEKMVFIVRGKLESVGEDGISAPLYEGSVCGEELLTWCLEHPLASKG 681 Query: 453 GKKIRVPGQRFLSNRTVTCLTNVEAFSLRASDLEQVTALFPRFLRSPRIQGAIRYESPYW 274 K R+P Q+ +SNRTV CLTNVEAF+LRA+DLE+VT++F RF RSPR+QGAIRY SPYW Sbjct: 682 CGKARIPKQKLVSNRTVCCLTNVEAFALRAADLEEVTSIFARFFRSPRVQGAIRYGSPYW 741 Query: 273 RGLAATRIQVAWRYRKKCLNRVETSKS 193 R AAT IQVAWRYR KCL+R +T++S Sbjct: 742 RCFAATTIQVAWRYRMKCLSRADTTRS 768 >dbj|BAF95185.1| cyclic nucleotide gated channel [Malus x domestica] Length = 632 Score = 313 bits (802), Expect = 3e-83 Identities = 149/201 (74%), Positives = 172/201 (85%) Frame = -2 Query: 813 RFHWAATRGVNEEVLLENFPEDLQREIRRHLFNFIKKIRILALMDEPILDAICERLRQKL 634 R++WAATRGVNEE+LLE PEDLQ +IRRHLF FIKK+RI ALMDEPILD+IC RLRQK Sbjct: 409 RYNWAATRGVNEEMLLEVLPEDLQTDIRRHLFTFIKKVRIFALMDEPILDSICGRLRQKT 468 Query: 633 YIKESKILYYGGVVDKMIFIVRGKLVSVDVDGNNAPLSEGDICGEELLTWCLDHSSTSKD 454 YI S +L GG+++KM+FIVRGK+ S+ DGN LSEGD+CGEELL WCL+HSS +KD Sbjct: 469 YINRSIVLSRGGLIEKMVFIVRGKMESIGEDGNRISLSEGDVCGEELLAWCLEHSSVNKD 528 Query: 453 GKKIRVPGQRFLSNRTVTCLTNVEAFSLRASDLEQVTALFPRFLRSPRIQGAIRYESPYW 274 GKKIR+PGQR LSNR V CLTNVEAFSLRA+D+E+VT++F RFLR PR+QGAIRYESPYW Sbjct: 529 GKKIRIPGQRLLSNRMVRCLTNVEAFSLRAADIEEVTSVFSRFLRKPRVQGAIRYESPYW 588 Query: 273 RGLAATRIQVAWRYRKKCLNR 211 RGLAA IQVAWRYRKK L R Sbjct: 589 RGLAARCIQVAWRYRKKRLQR 609