BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011118
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ...   326   4e-87
ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ...   325   1e-86
ref|XP_003534113.1| PREDICTED: probable cyclic nucleotide-gated ...   319   4e-85
ref|XP_003548318.1| PREDICTED: probable cyclic nucleotide-gated ...   317   3e-84
dbj|BAF95185.1| cyclic nucleotide gated channel [Malus x domestica]   313   3e-83

>ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 766

 Score =  326 bits (835), Expect = 4e-87
 Identities = 156/208 (75%), Positives = 181/208 (87%)
 Frame = -2

Query: 813  RFHWAATRGVNEEVLLENFPEDLQREIRRHLFNFIKKIRILALMDEPILDAICERLRQKL 634
            R++WAATRGVNEE+L+EN PEDLQR+IRRHLF F+KKIR+ ALMDEPILDAICERLRQK 
Sbjct: 559  RYNWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRLFALMDEPILDAICERLRQKT 618

Query: 633  YIKESKILYYGGVVDKMIFIVRGKLVSVDVDGNNAPLSEGDICGEELLTWCLDHSSTSKD 454
            YIK SKIL  GG+V+KM+F+VRGKL S+  DG   PLSEGD CGEELLTW L+HSS S D
Sbjct: 619  YIKGSKILSQGGLVEKMVFVVRGKLESIGEDGTRIPLSEGDSCGEELLTWYLEHSSVSTD 678

Query: 453  GKKIRVPGQRFLSNRTVTCLTNVEAFSLRASDLEQVTALFPRFLRSPRIQGAIRYESPYW 274
            G+K+R+PGQR +SNRTV CLTNVE+FSL ASD+E+VT LF RFLRSP +QGA+RYESPYW
Sbjct: 679  GRKVRLPGQRLVSNRTVRCLTNVESFSLSASDIEEVTILFTRFLRSPCVQGALRYESPYW 738

Query: 273  RGLAATRIQVAWRYRKKCLNRVETSKSE 190
            R LAATRIQVAWRYRKK L+RV +S S+
Sbjct: 739  RSLAATRIQVAWRYRKKRLSRVNSSPSD 766


>ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 766

 Score =  325 bits (832), Expect = 1e-86
 Identities = 155/208 (74%), Positives = 181/208 (87%)
 Frame = -2

Query: 813  RFHWAATRGVNEEVLLENFPEDLQREIRRHLFNFIKKIRILALMDEPILDAICERLRQKL 634
            R++WAATRGVNEE+L+EN PEDLQR+IRRHLF F+KKIR+ ALMDEPILDAIC+RLRQK 
Sbjct: 559  RYNWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRLFALMDEPILDAICDRLRQKT 618

Query: 633  YIKESKILYYGGVVDKMIFIVRGKLVSVDVDGNNAPLSEGDICGEELLTWCLDHSSTSKD 454
            YIK SKIL  GG+V+KM+F+VRGKL S+  DG   PLSEGD CGEELLTW L+HSS S D
Sbjct: 619  YIKGSKILSQGGLVEKMVFVVRGKLESIGEDGTRIPLSEGDSCGEELLTWYLEHSSVSTD 678

Query: 453  GKKIRVPGQRFLSNRTVTCLTNVEAFSLRASDLEQVTALFPRFLRSPRIQGAIRYESPYW 274
            G+K+R+PGQR +SNRTV CLTNVE+FSL ASD+E+VT LF RFLRSP +QGA+RYESPYW
Sbjct: 679  GRKVRLPGQRLVSNRTVRCLTNVESFSLSASDIEEVTILFTRFLRSPCVQGALRYESPYW 738

Query: 273  RGLAATRIQVAWRYRKKCLNRVETSKSE 190
            R LAATRIQVAWRYRKK L+RV +S S+
Sbjct: 739  RSLAATRIQVAWRYRKKRLSRVNSSPSD 766


>ref|XP_003534113.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 781

 Score =  319 bits (818), Expect = 4e-85
 Identities = 154/207 (74%), Positives = 177/207 (85%)
 Frame = -2

Query: 813  RFHWAATRGVNEEVLLENFPEDLQREIRRHLFNFIKKIRILALMDEPILDAICERLRQKL 634
            R++WAATRGVNEE+LLEN PEDLQR+IRRHLF FIKK+RI AL+DEPILDAICERLRQK 
Sbjct: 565  RYNWAATRGVNEEMLLENLPEDLQRDIRRHLFTFIKKVRIFALLDEPILDAICERLRQKT 624

Query: 633  YIKESKILYYGGVVDKMIFIVRGKLVSVDVDGNNAPLSEGDICGEELLTWCLDHSSTSKD 454
            YIK SKI Y GG+V+KM+FIVRGKL SV  DG +APL EG +CGEELLTWCL+H   SK 
Sbjct: 625  YIKGSKIFYDGGLVEKMVFIVRGKLESVGEDGISAPLYEGSVCGEELLTWCLEHPLASKG 684

Query: 453  GKKIRVPGQRFLSNRTVTCLTNVEAFSLRASDLEQVTALFPRFLRSPRIQGAIRYESPYW 274
              K R+P Q+ +SNRTV CLTNVEAFSLRA+DLE+VT+LF RF RSPR+QGAIRYESPYW
Sbjct: 685  CGKARIPRQKLVSNRTVGCLTNVEAFSLRAADLEEVTSLFARFFRSPRVQGAIRYESPYW 744

Query: 273  RGLAATRIQVAWRYRKKCLNRVETSKS 193
            R  AAT IQVAWRYR KCL+R +T++S
Sbjct: 745  RCFAATSIQVAWRYRMKCLSRADTTRS 771


>ref|XP_003548318.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 778

 Score =  317 bits (811), Expect = 3e-84
 Identities = 152/207 (73%), Positives = 177/207 (85%)
 Frame = -2

Query: 813  RFHWAATRGVNEEVLLENFPEDLQREIRRHLFNFIKKIRILALMDEPILDAICERLRQKL 634
            R++WAATRGVNEE+LLEN PEDLQR+IRRHLF FIKK+RI AL+DEPILDAICERLRQK 
Sbjct: 562  RYNWAATRGVNEEMLLENLPEDLQRDIRRHLFTFIKKVRIFALLDEPILDAICERLRQKT 621

Query: 633  YIKESKILYYGGVVDKMIFIVRGKLVSVDVDGNNAPLSEGDICGEELLTWCLDHSSTSKD 454
            YIK SKILY GG+V+KM+FIVRGKL SV  DG +APL EG +CGEELLTWCL+H   SK 
Sbjct: 622  YIKGSKILYDGGLVEKMVFIVRGKLESVGEDGISAPLYEGSVCGEELLTWCLEHPLASKG 681

Query: 453  GKKIRVPGQRFLSNRTVTCLTNVEAFSLRASDLEQVTALFPRFLRSPRIQGAIRYESPYW 274
              K R+P Q+ +SNRTV CLTNVEAF+LRA+DLE+VT++F RF RSPR+QGAIRY SPYW
Sbjct: 682  CGKARIPKQKLVSNRTVCCLTNVEAFALRAADLEEVTSIFARFFRSPRVQGAIRYGSPYW 741

Query: 273  RGLAATRIQVAWRYRKKCLNRVETSKS 193
            R  AAT IQVAWRYR KCL+R +T++S
Sbjct: 742  RCFAATTIQVAWRYRMKCLSRADTTRS 768


>dbj|BAF95185.1| cyclic nucleotide gated channel [Malus x domestica]
          Length = 632

 Score =  313 bits (802), Expect = 3e-83
 Identities = 149/201 (74%), Positives = 172/201 (85%)
 Frame = -2

Query: 813  RFHWAATRGVNEEVLLENFPEDLQREIRRHLFNFIKKIRILALMDEPILDAICERLRQKL 634
            R++WAATRGVNEE+LLE  PEDLQ +IRRHLF FIKK+RI ALMDEPILD+IC RLRQK 
Sbjct: 409  RYNWAATRGVNEEMLLEVLPEDLQTDIRRHLFTFIKKVRIFALMDEPILDSICGRLRQKT 468

Query: 633  YIKESKILYYGGVVDKMIFIVRGKLVSVDVDGNNAPLSEGDICGEELLTWCLDHSSTSKD 454
            YI  S +L  GG+++KM+FIVRGK+ S+  DGN   LSEGD+CGEELL WCL+HSS +KD
Sbjct: 469  YINRSIVLSRGGLIEKMVFIVRGKMESIGEDGNRISLSEGDVCGEELLAWCLEHSSVNKD 528

Query: 453  GKKIRVPGQRFLSNRTVTCLTNVEAFSLRASDLEQVTALFPRFLRSPRIQGAIRYESPYW 274
            GKKIR+PGQR LSNR V CLTNVEAFSLRA+D+E+VT++F RFLR PR+QGAIRYESPYW
Sbjct: 529  GKKIRIPGQRLLSNRMVRCLTNVEAFSLRAADIEEVTSVFSRFLRKPRVQGAIRYESPYW 588

Query: 273  RGLAATRIQVAWRYRKKCLNR 211
            RGLAA  IQVAWRYRKK L R
Sbjct: 589  RGLAARCIQVAWRYRKKRLQR 609