BLASTX nr result

ID: Coptis25_contig00011117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011117
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002987057.1| hypothetical protein SELMODRAFT_271886 [Sela...    46   6e-06

>ref|XP_002987057.1| hypothetical protein SELMODRAFT_271886 [Selaginella moellendorffii]
           gi|300145222|gb|EFJ11900.1| hypothetical protein
           SELMODRAFT_271886 [Selaginella moellendorffii]
          Length = 389

 Score = 45.8 bits (107), Expect(2) = 6e-06
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
 Frame = -1

Query: 557 KQGKDKATGATKQTYDTTK*TLEQGKDKAADATK----QTYNSTKQTLEQGKQNAAETLS 390
           K+ KD+A+  TK   D T  + ++ KD+A+++ K    Q   STK+T EQG  +AA+   
Sbjct: 277 KEAKDQASETTKNAKDQTSESAKKAKDQASESAKKVKDQARESTKKTTEQG-SDAAKKAQ 335

Query: 389 GKAQKAKEA-----KETVKGGKDKA 330
            KA  AK+A     +   K G +KA
Sbjct: 336 EKADAAKQAVNEKSEAASKSGSEKA 360



 Score = 29.3 bits (64), Expect(2) = 6e-06
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -3

Query: 291 TQKAKFNLQYAKEKGSQAAGDLGAKMRKD-DEL 196
           ++KAK   + AKE  S+A G+LG K++   DEL
Sbjct: 357 SEKAKSQYESAKEAASKATGELGEKLKASRDEL 389


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