BLASTX nr result

ID: Coptis25_contig00011105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011105
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554698.1| PREDICTED: uncharacterized protein LOC100800...   177   3e-42
ref|XP_002512246.1| conserved hypothetical protein [Ricinus comm...   171   2e-40
ref|NP_001050975.2| Os03g0695500 [Oryza sativa Japonica Group] g...   169   1e-39
gb|EEE59742.1| hypothetical protein OsJ_12207 [Oryza sativa Japo...   169   1e-39
gb|ABF98342.1| expressed protein [Oryza sativa Japonica Group]        169   1e-39

>ref|XP_003554698.1| PREDICTED: uncharacterized protein LOC100800250 [Glycine max]
          Length = 378

 Score =  177 bits (450), Expect = 3e-42
 Identities = 90/112 (80%), Positives = 101/112 (90%)
 Frame = -1

Query: 337 LVLVGFLAYTLMSGFLSDRSEDSVLTATQKTSVVKLQVGLLGMARSFQKDLDRIAEVADT 158
           L+LVGFLA+ L+SGFLSDRSE SVLTA  KT+V+KLQVGLLGM R+ Q+DL+RIAEVADT
Sbjct: 166 LILVGFLAFVLVSGFLSDRSEGSVLTAADKTTVLKLQVGLLGMGRTLQRDLNRIAEVADT 225

Query: 157 STSEGLKYVLTETTLALLRHPDCCISGYSSVDVKRSIEEGERRFNQHSIEER 2
           STSEGL YVLTETTLALLRHPD CIS YSSVD+KR IE+GE+RFNQ SIEER
Sbjct: 226 STSEGLHYVLTETTLALLRHPDYCISAYSSVDIKRGIEDGEKRFNQLSIEER 277



 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
 Frame = -3

Query: 887 LKWNPL----LQTFPTRIPPPFQLMSRKESNFSVKCVMGNKKWGFELKEKEKDGFKVEKV 720
           LKWN L     +T P R  P   +   K    SVKC+  ++K          + F ++  
Sbjct: 16  LKWNQLPSLPRRTRPDRFTP---IPDSKRRVSSVKCISSSRK--------PDNTFSLQSP 64

Query: 719 MEMI-------LKALQKPAVAAIMLGLLLSYDPHSALAASGGRMGGNAF 594
            E++       LKAL+KPA+AA+++GLLL YDP  A AASGGRMGG +F
Sbjct: 65  WEVLASTVSNTLKALKKPAIAAVLVGLLLMYDPTCAFAASGGRMGGRSF 113


>ref|XP_002512246.1| conserved hypothetical protein [Ricinus communis]
           gi|223548207|gb|EEF49698.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 360

 Score =  171 bits (434), Expect = 2e-40
 Identities = 87/111 (78%), Positives = 99/111 (89%)
 Frame = -1

Query: 334 VLVGFLAYTLMSGFLSDRSEDSVLTATQKTSVVKLQVGLLGMARSFQKDLDRIAEVADTS 155
           +L GF A+ L+SGFLSDRSE  VLTAT KTSV+KLQVGLLGM R+ Q+DL+RIAEVADTS
Sbjct: 149 ILAGFAAFMLVSGFLSDRSEGGVLTATDKTSVLKLQVGLLGMGRALQRDLNRIAEVADTS 208

Query: 154 TSEGLKYVLTETTLALLRHPDCCISGYSSVDVKRSIEEGERRFNQHSIEER 2
           +SEGL YVLTET+LALLRHPD CISGYS VDVKRS++EGE+RFNQ SIEER
Sbjct: 209 SSEGLTYVLTETSLALLRHPDYCISGYSYVDVKRSMDEGEKRFNQLSIEER 259


>ref|NP_001050975.2| Os03g0695500 [Oryza sativa Japonica Group]
           gi|27552542|gb|AAO19365.1| unknown protein [Oryza sativa
           Japonica Group] gi|108710546|gb|ABF98341.1| expressed
           protein [Oryza sativa Japonica Group]
           gi|125545358|gb|EAY91497.1| hypothetical protein
           OsI_13131 [Oryza sativa Indica Group]
           gi|255674808|dbj|BAF12889.2| Os03g0695500 [Oryza sativa
           Japonica Group]
          Length = 398

 Score =  169 bits (428), Expect = 1e-39
 Identities = 86/111 (77%), Positives = 97/111 (87%)
 Frame = -1

Query: 334 VLVGFLAYTLMSGFLSDRSEDSVLTATQKTSVVKLQVGLLGMARSFQKDLDRIAEVADTS 155
           VL+GF A+  ++GFLSD S  SVLT T KT+V+KLQVGLLGMARSFQK+LD+IAE ADTS
Sbjct: 187 VLMGFAAFLYLAGFLSDSSGGSVLTETDKTTVLKLQVGLLGMARSFQKELDQIAEKADTS 246

Query: 154 TSEGLKYVLTETTLALLRHPDCCISGYSSVDVKRSIEEGERRFNQHSIEER 2
           T  GL YVLTETTLALLRHPDCCIS YSSVDVKRSI++GE+RFNQ SIEER
Sbjct: 247 TPAGLSYVLTETTLALLRHPDCCISAYSSVDVKRSIDDGEKRFNQLSIEER 297


>gb|EEE59742.1| hypothetical protein OsJ_12207 [Oryza sativa Japonica Group]
          Length = 469

 Score =  169 bits (428), Expect = 1e-39
 Identities = 86/111 (77%), Positives = 97/111 (87%)
 Frame = -1

Query: 334 VLVGFLAYTLMSGFLSDRSEDSVLTATQKTSVVKLQVGLLGMARSFQKDLDRIAEVADTS 155
           VL+GF A+  ++GFLSD S  SVLT T KT+V+KLQVGLLGMARSFQK+LD+IAE ADTS
Sbjct: 258 VLMGFAAFLYLAGFLSDSSGGSVLTETDKTTVLKLQVGLLGMARSFQKELDQIAEKADTS 317

Query: 154 TSEGLKYVLTETTLALLRHPDCCISGYSSVDVKRSIEEGERRFNQHSIEER 2
           T  GL YVLTETTLALLRHPDCCIS YSSVDVKRSI++GE+RFNQ SIEER
Sbjct: 318 TPAGLSYVLTETTLALLRHPDCCISAYSSVDVKRSIDDGEKRFNQLSIEER 368


>gb|ABF98342.1| expressed protein [Oryza sativa Japonica Group]
          Length = 335

 Score =  169 bits (428), Expect = 1e-39
 Identities = 86/111 (77%), Positives = 97/111 (87%)
 Frame = -1

Query: 334 VLVGFLAYTLMSGFLSDRSEDSVLTATQKTSVVKLQVGLLGMARSFQKDLDRIAEVADTS 155
           VL+GF A+  ++GFLSD S  SVLT T KT+V+KLQVGLLGMARSFQK+LD+IAE ADTS
Sbjct: 187 VLMGFAAFLYLAGFLSDSSGGSVLTETDKTTVLKLQVGLLGMARSFQKELDQIAEKADTS 246

Query: 154 TSEGLKYVLTETTLALLRHPDCCISGYSSVDVKRSIEEGERRFNQHSIEER 2
           T  GL YVLTETTLALLRHPDCCIS YSSVDVKRSI++GE+RFNQ SIEER
Sbjct: 247 TPAGLSYVLTETTLALLRHPDCCISAYSSVDVKRSIDDGEKRFNQLSIEER 297


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