BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011104
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC85725.1| putative carbamoyl phosphate synthase small subu...   184   1e-62
ref|XP_003526851.1| PREDICTED: carbamoyl-phosphate synthase smal...   185   1e-60
ref|NP_001241589.1| uncharacterized protein LOC100788470 [Glycin...   183   1e-60
gb|ADB92668.1| carbamoyl-phosphate synthase [Populus tremula x P...   183   1e-60
ref|XP_002282659.2| PREDICTED: carbamoyl-phosphate synthase smal...   184   2e-60

>emb|CAC85725.1| putative carbamoyl phosphate synthase small subunit [Nicotiana
           tabacum]
          Length = 432

 Score =  184 bits (467), Expect(2) = 1e-62
 Identities = 86/96 (89%), Positives = 91/96 (94%)
 Frame = +3

Query: 138 VVAYDFGIKHNILRRIASCGCKITVVPCTWPASETLKMKPDGVVFSNGLGDPSAVPYAVE 317
           VVAYDFGIKHNILRR+AS GCKITVVP TWPASETLKMKPDGV+FSNG GDPSAVPYAVE
Sbjct: 246 VVAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKMKPDGVLFSNGPGDPSAVPYAVE 305

Query: 318 VVKEMLGKVPVFGICMGHQLCGQALGGKTFKMKFGH 425
            VKE++GK+PVFGICMGHQL GQALGGKTFKMKFGH
Sbjct: 306 AVKELIGKIPVFGICMGHQLLGQALGGKTFKMKFGH 341



 Score = 80.9 bits (198), Expect(2) = 1e-62
 Identities = 40/46 (86%), Positives = 42/46 (91%)
 Frame = +2

Query: 2   GIYDVDTCAIARRLRQDGSLIGVLNTEKFKTDEELLEMSRTWNIVG 139
           GIYDVDT AI RRLRQDGSLIGVL+TE  KTDEELLEMSRTW+IVG
Sbjct: 164 GIYDVDTRAITRRLRQDGSLIGVLSTENSKTDEELLEMSRTWDIVG 209


>ref|XP_003526851.1| PREDICTED: carbamoyl-phosphate synthase small chain-like [Glycine
           max]
          Length = 438

 Score =  185 bits (469), Expect(2) = 1e-60
 Identities = 88/103 (85%), Positives = 94/103 (91%), Gaps = 1/103 (0%)
 Frame = +3

Query: 120 VPGILL-VVAYDFGIKHNILRRIASCGCKITVVPCTWPASETLKMKPDGVVFSNGLGDPS 296
           VPG    VVAYDFGIKHNILRR+AS GCKITVVPCTWPASETLKMKP+GV+FSNG GDPS
Sbjct: 230 VPGETFHVVAYDFGIKHNILRRLASYGCKITVVPCTWPASETLKMKPNGVIFSNGPGDPS 289

Query: 297 AVPYAVEVVKEMLGKVPVFGICMGHQLCGQALGGKTFKMKFGH 425
           AVPYA+E VK ++GKVPVFGICMGHQL GQALGGKTFKMKFGH
Sbjct: 290 AVPYAIETVKNIIGKVPVFGICMGHQLLGQALGGKTFKMKFGH 332



 Score = 73.6 bits (179), Expect(2) = 1e-60
 Identities = 35/46 (76%), Positives = 40/46 (86%)
 Frame = +2

Query: 2   GIYDVDTCAIARRLRQDGSLIGVLNTEKFKTDEELLEMSRTWNIVG 139
           GIYDVDT AI RRLRQDGSLIGVL T+  +TDEELL MS++W+IVG
Sbjct: 157 GIYDVDTRAITRRLRQDGSLIGVLTTDNSRTDEELLHMSKSWDIVG 202


>ref|NP_001241589.1| uncharacterized protein LOC100788470 [Glycine max]
           gi|255644591|gb|ACU22798.1| unknown [Glycine max]
          Length = 438

 Score =  183 bits (465), Expect(2) = 1e-60
 Identities = 89/103 (86%), Positives = 93/103 (90%), Gaps = 1/103 (0%)
 Frame = +3

Query: 120 VPGILL-VVAYDFGIKHNILRRIASCGCKITVVPCTWPASETLKMKPDGVVFSNGLGDPS 296
           VPG    VVAYDFGIKHNILRR+AS GCKITVVPCTW ASETLKMKPDGV+FSNG GDPS
Sbjct: 230 VPGEAFHVVAYDFGIKHNILRRLASYGCKITVVPCTWSASETLKMKPDGVLFSNGPGDPS 289

Query: 297 AVPYAVEVVKEMLGKVPVFGICMGHQLCGQALGGKTFKMKFGH 425
           AVPYAVE VK ++GKVPVFGICMGHQL GQALGGKTFKMKFGH
Sbjct: 290 AVPYAVETVKNIIGKVPVFGICMGHQLLGQALGGKTFKMKFGH 332



 Score = 74.7 bits (182), Expect(2) = 1e-60
 Identities = 36/46 (78%), Positives = 40/46 (86%)
 Frame = +2

Query: 2   GIYDVDTCAIARRLRQDGSLIGVLNTEKFKTDEELLEMSRTWNIVG 139
           GIYDVDT AI RRLRQDGSLIGVL+T+  K DEELL MS++WNIVG
Sbjct: 157 GIYDVDTRAITRRLRQDGSLIGVLSTDNSKKDEELLHMSKSWNIVG 202


>gb|ADB92668.1| carbamoyl-phosphate synthase [Populus tremula x Populus alba]
          Length = 400

 Score =  183 bits (464), Expect(2) = 1e-60
 Identities = 87/96 (90%), Positives = 90/96 (93%)
 Frame = +3

Query: 138 VVAYDFGIKHNILRRIASCGCKITVVPCTWPASETLKMKPDGVVFSNGLGDPSAVPYAVE 317
           VVAYDFGIKHNILRR+AS GCKITVVP  WPASETLKMKPDGV+FSNG GDPSAVPYAVE
Sbjct: 234 VVAYDFGIKHNILRRLASYGCKITVVPSKWPASETLKMKPDGVLFSNGPGDPSAVPYAVE 293

Query: 318 VVKEMLGKVPVFGICMGHQLCGQALGGKTFKMKFGH 425
            VKE+LGKVPVFGICMGHQL GQALGGKTFKMKFGH
Sbjct: 294 TVKELLGKVPVFGICMGHQLLGQALGGKTFKMKFGH 329



 Score = 75.1 bits (183), Expect(2) = 1e-60
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = +2

Query: 2   GIYDVDTCAIARRLRQDGSLIGVLNTEKFKTDEELLEMSRTWNIVG 139
           GIYDVDT AI RRLRQDGSL+GVL TE+ KTDEELL+MSR+W+I G
Sbjct: 153 GIYDVDTRAITRRLRQDGSLVGVLTTEESKTDEELLKMSRSWDIEG 198


>ref|XP_002282659.2| PREDICTED: carbamoyl-phosphate synthase small chain [Vitis
           vinifera] gi|296088611|emb|CBI37602.3| unnamed protein
           product [Vitis vinifera]
          Length = 426

 Score =  184 bits (468), Expect(2) = 2e-60
 Identities = 87/96 (90%), Positives = 91/96 (94%)
 Frame = +3

Query: 138 VVAYDFGIKHNILRRIASCGCKITVVPCTWPASETLKMKPDGVVFSNGLGDPSAVPYAVE 317
           V+AYDFGIKHNILRR+AS GCKITVVP TWPASETLKMKPDGV+FSNG GDPSAVPYAVE
Sbjct: 240 VIAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKMKPDGVLFSNGPGDPSAVPYAVE 299

Query: 318 VVKEMLGKVPVFGICMGHQLCGQALGGKTFKMKFGH 425
            VKE+LGKVPVFGICMGHQL GQALGGKTFKMKFGH
Sbjct: 300 TVKEILGKVPVFGICMGHQLLGQALGGKTFKMKFGH 335



 Score = 72.8 bits (177), Expect(2) = 2e-60
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = +2

Query: 2   GIYDVDTCAIARRLRQDGSLIGVLNTEKFKTDEELLEMSRTWNIVG 139
           GIYDVDT AI RRLRQDGSLIGVL+TE  KTDEELL++S +W+IVG
Sbjct: 158 GIYDVDTRAITRRLRQDGSLIGVLSTEDSKTDEELLKISCSWDIVG 203