BLASTX nr result
ID: Coptis25_contig00011102
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011102
(1860 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI20041.3| unnamed protein product [Vitis vinifera] 428 e-117
ref|XP_002271199.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe... 428 e-117
emb|CAN78018.1| hypothetical protein VITISV_002923 [Vitis vinifera] 428 e-117
ref|XP_002534543.1| DNA binding protein, putative [Ricinus commu... 419 e-114
ref|XP_002298196.1| predicted protein [Populus trichocarpa] gi|1... 408 e-111
>emb|CBI20041.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 428 bits (1100), Expect = e-117
Identities = 205/246 (83%), Positives = 224/246 (91%)
Frame = -3
Query: 1831 MWYLCVFFHRLLDYRRPEVEALAQLFGAFEDGDDKNTLDWKLPELHHPDSPFHLVNLPSE 1652
MWYLCVF+HRLLDYR+ EVE+LA LFG EDG + L WKLP+ HHPDSPFH V LPSE
Sbjct: 1 MWYLCVFYHRLLDYRKAEVESLAHLFGVLEDG---SALQWKLPQHHHPDSPFHFVYLPSE 57
Query: 1651 DIAKSIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGK 1472
D+A++IANRSILVKGIYELWGEGSSYEELEEAI++YP+ERKLPYLA+ +TF+I VDSFGK
Sbjct: 58 DVARNIANRSILVKGIYELWGEGSSYEELEEAIRSYPDERKLPYLAAESTFKITVDSFGK 117
Query: 1471 AISFQEQNERIYGFKYIPFKGRVNLKNPEHKFWLIETDEYGSNNGLPPVVQRRIFFGREV 1292
ISFQEQN+RI G YIPFKGRVNLKNPEHKFWLIETD+YGSNNGLPPVVQ+RIFFGREV
Sbjct: 118 VISFQEQNDRIQGLTYIPFKGRVNLKNPEHKFWLIETDDYGSNNGLPPVVQKRIFFGREV 177
Query: 1291 GAADRKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAH 1112
GAADRKLLPTY+LKSR YLGPTAMDAEMAFLMANQAL T GKLVYDPFVGTGSILV AAH
Sbjct: 178 GAADRKLLPTYQLKSRTYLGPTAMDAEMAFLMANQALATAGKLVYDPFVGTGSILVAAAH 237
Query: 1111 YGAMTM 1094
+GAMTM
Sbjct: 238 FGAMTM 243
Score = 303 bits (777), Expect = 8e-80
Identities = 152/233 (65%), Positives = 166/233 (71%)
Frame = -1
Query: 951 GADIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLLRADNNLPPWRPGLKEVFDAIICDPP 772
GADIDIRVVRDGRGP+CNVWSNF+QY LPMP+SLLRADNNL PWRPGLKEVFDAIICDPP
Sbjct: 244 GADIDIRVVRDGRGPDCNVWSNFKQYHLPMPISLLRADNNLTPWRPGLKEVFDAIICDPP 303
Query: 771 YXXXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLFELAARMLVMG 592
Y + PYTVPDDKR DHIPSTA YSLAEC+HDL ++AA+MLVMG
Sbjct: 304 YGG---------------VISPYTVPDDKRTDHIPSTAAYSLAECVHDLLDVAAKMLVMG 348
Query: 591 GRLVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKKGPYSEDIAEA 412
GRLV+FYPVLRED ST+THFPEHPCF L+A CEQILS RYSR+LLTMVK GPY+E+IAE
Sbjct: 349 GRLVYFYPVLREDDSTETHFPEHPCFKLIATCEQILSLRYSRVLLTMVKIGPYTEEIAET 408
Query: 411 AVKMHLDFRENHLKWLEDGKLHSAVFSPNDSQTASAESKLNKDSKPKYRGKYV 253
A HLD KDSKPKYRGKYV
Sbjct: 409 ARLKHLD----------------------------------KDSKPKYRGKYV 427
>ref|XP_002271199.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM11 homolog [Vitis
vinifera]
Length = 477
Score = 428 bits (1100), Expect = e-117
Identities = 205/246 (83%), Positives = 224/246 (91%)
Frame = -3
Query: 1831 MWYLCVFFHRLLDYRRPEVEALAQLFGAFEDGDDKNTLDWKLPELHHPDSPFHLVNLPSE 1652
MWYLCVF+HRLLDYR+ EVE+LA LFG EDG + L WKLP+ HHPDSPFH V LPSE
Sbjct: 1 MWYLCVFYHRLLDYRKAEVESLAHLFGVLEDG---SALQWKLPQHHHPDSPFHFVYLPSE 57
Query: 1651 DIAKSIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGK 1472
D+A++IANRSILVKGIYELWGEGSSYEELEEAI++YP+ERKLPYLA+ +TF+I VDSFGK
Sbjct: 58 DVARNIANRSILVKGIYELWGEGSSYEELEEAIRSYPDERKLPYLAAESTFKITVDSFGK 117
Query: 1471 AISFQEQNERIYGFKYIPFKGRVNLKNPEHKFWLIETDEYGSNNGLPPVVQRRIFFGREV 1292
ISFQEQN+RI G YIPFKGRVNLKNPEHKFWLIETD+YGSNNGLPPVVQ+RIFFGREV
Sbjct: 118 VISFQEQNDRIQGLTYIPFKGRVNLKNPEHKFWLIETDDYGSNNGLPPVVQKRIFFGREV 177
Query: 1291 GAADRKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAH 1112
GAADRKLLPTY+LKSR YLGPTAMDAEMAFLMANQAL T GKLVYDPFVGTGSILV AAH
Sbjct: 178 GAADRKLLPTYQLKSRTYLGPTAMDAEMAFLMANQALATAGKLVYDPFVGTGSILVAAAH 237
Query: 1111 YGAMTM 1094
+GAMTM
Sbjct: 238 FGAMTM 243
Score = 363 bits (932), Expect = 8e-98
Identities = 173/234 (73%), Positives = 193/234 (82%), Gaps = 1/234 (0%)
Frame = -1
Query: 951 GADIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLLRADNNLPPWRPGLKEVFDAIICDPP 772
GADIDIRVVRDGRGP+CNVWSNF+QY LPMP+SLLRADNNL PWRPGLKEVFDAIICDPP
Sbjct: 244 GADIDIRVVRDGRGPDCNVWSNFKQYHLPMPISLLRADNNLTPWRPGLKEVFDAIICDPP 303
Query: 771 YXXXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLFELAARMLVMG 592
Y G + PYTVPDDKR DHIPSTA YSLAEC+HDL ++AA+MLVMG
Sbjct: 304 YGVRAGGRKSGGRKLLKGVISPYTVPDDKRTDHIPSTAAYSLAECVHDLLDVAAKMLVMG 363
Query: 591 GRLVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKKGPYSEDIAEA 412
GRLV+FYPVLRED ST+THFPEHPCF L+A CEQILS RYSR+LLTMVK GPY+E+IAE
Sbjct: 364 GRLVYFYPVLREDDSTETHFPEHPCFKLIATCEQILSLRYSRVLLTMVKIGPYTEEIAET 423
Query: 411 AVKMHLDFRENHLKWLEDGKLHSAVFSPNDSQTASA-ESKLNKDSKPKYRGKYV 253
A HL+F+ENHLKWLE+G LH+AVFS D Q A +SK +KDSKPKYRGKYV
Sbjct: 424 ARLKHLEFKENHLKWLEEGNLHAAVFSSADPQLGDAGDSKSSKDSKPKYRGKYV 477
>emb|CAN78018.1| hypothetical protein VITISV_002923 [Vitis vinifera]
Length = 477
Score = 428 bits (1100), Expect = e-117
Identities = 205/246 (83%), Positives = 224/246 (91%)
Frame = -3
Query: 1831 MWYLCVFFHRLLDYRRPEVEALAQLFGAFEDGDDKNTLDWKLPELHHPDSPFHLVNLPSE 1652
MWYLCVF+HRLLDYR+ EVE+LA LFG EDG + L WKLP+ HHPDSPFH V LPSE
Sbjct: 1 MWYLCVFYHRLLDYRKAEVESLAHLFGVLEDG---SALQWKLPQHHHPDSPFHFVYLPSE 57
Query: 1651 DIAKSIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGK 1472
D+A++IANRSILVKGIYELWGEGSSYEELEEAI++YP+ERKLPYLA+ +TF+I VDSFGK
Sbjct: 58 DVARNIANRSILVKGIYELWGEGSSYEELEEAIRSYPDERKLPYLAAESTFKITVDSFGK 117
Query: 1471 AISFQEQNERIYGFKYIPFKGRVNLKNPEHKFWLIETDEYGSNNGLPPVVQRRIFFGREV 1292
ISFQEQN+RI G YIPFKGRVNLKNPEHKFWLIETD+YGSNNGLPPVVQ+RIFFGREV
Sbjct: 118 VISFQEQNDRIQGLTYIPFKGRVNLKNPEHKFWLIETDDYGSNNGLPPVVQKRIFFGREV 177
Query: 1291 GAADRKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAH 1112
GAADRKLLPTY+LKSR YLGPTAMDAEMAFLMANQAL T GKLVYDPFVGTGSILV AAH
Sbjct: 178 GAADRKLLPTYQLKSRTYLGPTAMDAEMAFLMANQALATAGKLVYDPFVGTGSILVAAAH 237
Query: 1111 YGAMTM 1094
+GAMTM
Sbjct: 238 FGAMTM 243
Score = 366 bits (939), Expect = 1e-98
Identities = 174/234 (74%), Positives = 194/234 (82%), Gaps = 1/234 (0%)
Frame = -1
Query: 951 GADIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLLRADNNLPPWRPGLKEVFDAIICDPP 772
GADIDIRVVRDGRGP+CNVWSNF+QY LPMP+SLLRADNNLPPWRPGLKEVFDAIICDPP
Sbjct: 244 GADIDIRVVRDGRGPDCNVWSNFKQYHLPMPISLLRADNNLPPWRPGLKEVFDAIICDPP 303
Query: 771 YXXXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLFELAARMLVMG 592
Y G + PYTVPDDKR DHIPSTA YSLAEC+HDL ++AA+MLVMG
Sbjct: 304 YGVRAGGRKSGGRKLLKGVIGPYTVPDDKRTDHIPSTAAYSLAECVHDLLDVAAKMLVMG 363
Query: 591 GRLVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKKGPYSEDIAEA 412
GRLV+FYPVLRED ST+THFPEHPCF L+A CEQILS RYSR+LLTMVK GPY+E+IAE
Sbjct: 364 GRLVYFYPVLREDDSTETHFPEHPCFKLIATCEQILSLRYSRVLLTMVKIGPYTEEIAET 423
Query: 411 AVKMHLDFRENHLKWLEDGKLHSAVFSPNDSQTASA-ESKLNKDSKPKYRGKYV 253
A HL+F+ENHLKWLE+G LH+AVFS D Q A +SK +KDSKPKYRGKYV
Sbjct: 424 ARLKHLEFKENHLKWLEEGNLHAAVFSSADPQLGDAGDSKSSKDSKPKYRGKYV 477
>ref|XP_002534543.1| DNA binding protein, putative [Ricinus communis]
gi|223525076|gb|EEF27839.1| DNA binding protein, putative
[Ricinus communis]
Length = 405
Score = 419 bits (1076), Expect = e-114
Identities = 196/246 (79%), Positives = 223/246 (90%)
Frame = -3
Query: 1831 MWYLCVFFHRLLDYRRPEVEALAQLFGAFEDGDDKNTLDWKLPELHHPDSPFHLVNLPSE 1652
MWYLCVF+HRLLDYR+PEVE+L+QLFG E ++L+WKLP+ HHPDSPFH VNLP+E
Sbjct: 1 MWYLCVFYHRLLDYRKPEVESLSQLFGVSE-----SSLEWKLPQYHHPDSPFHFVNLPNE 55
Query: 1651 DIAKSIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGK 1472
DIA++IANRSILVKG+YE+WGEGS YEEL+EAI YP++RKLPYL+S TTF+I VDSFGK
Sbjct: 56 DIARNIANRSILVKGMYEVWGEGSDYEELKEAILRYPDDRKLPYLSSETTFKITVDSFGK 115
Query: 1471 AISFQEQNERIYGFKYIPFKGRVNLKNPEHKFWLIETDEYGSNNGLPPVVQRRIFFGREV 1292
ISFQEQN+RI G YIPFKGRVNLKNP+HKFWL+ETD+YG NNGLPPVVQRRIFFGREV
Sbjct: 116 VISFQEQNDRIKGLSYIPFKGRVNLKNPDHKFWLMETDDYGVNNGLPPVVQRRIFFGREV 175
Query: 1291 GAADRKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAH 1112
G ADRKL+PTY+LKSR YLGPTAMDAEMAFLMANQALVTPGKLVYDPF GTGSIL+ AAH
Sbjct: 176 GGADRKLIPTYQLKSRNYLGPTAMDAEMAFLMANQALVTPGKLVYDPFTGTGSILIAAAH 235
Query: 1111 YGAMTM 1094
+G+MTM
Sbjct: 236 FGSMTM 241
Score = 129 bits (324), Expect = 3e-27
Identities = 59/85 (69%), Positives = 64/85 (75%)
Frame = -1
Query: 951 GADIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLLRADNNLPPWRPGLKEVFDAIICDPP 772
GADIDIRVVRDGRGP+CNVWSNF+QYGLP P+ LLRADNNLPPWR GLKE+FDAIICDPP
Sbjct: 242 GADIDIRVVRDGRGPDCNVWSNFKQYGLPSPIGLLRADNNLPPWRSGLKEIFDAIICDPP 301
Query: 771 YXXXXXXXXXXXXXXXXGTVDPYTV 697
Y G V PYT+
Sbjct: 302 YGVRAGGRKSGGRKLLKGAVGPYTI 326
Score = 107 bits (267), Expect = 1e-20
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Frame = -1
Query: 489 ILSFRYSRILLTMVKKGPYSEDIAEAAVKMHLDFRENHLKWLEDGKLHSAVFSPNDSQ-T 313
ILS RYSR+LLTMVK G Y+++IAEAA HL+F+ENHLKWLE+G LHS+VFSP DSQ
Sbjct: 326 ILSSRYSRVLLTMVKIGRYTDEIAEAARLKHLEFKENHLKWLEEGNLHSSVFSPADSQIN 385
Query: 312 ASAESKLNKDSKPKYRGKYV 253
+SK K+ KPKYRGKYV
Sbjct: 386 GIGDSKAFKELKPKYRGKYV 405
>ref|XP_002298196.1| predicted protein [Populus trichocarpa] gi|118486632|gb|ABK95153.1|
unknown [Populus trichocarpa] gi|222845454|gb|EEE83001.1|
predicted protein [Populus trichocarpa]
Length = 474
Score = 408 bits (1048), Expect = e-111
Identities = 196/246 (79%), Positives = 220/246 (89%)
Frame = -3
Query: 1831 MWYLCVFFHRLLDYRRPEVEALAQLFGAFEDGDDKNTLDWKLPELHHPDSPFHLVNLPSE 1652
MWYLCVF+HRLL YRR EVE+LA++FG F ++L+W+LPE HPDSPFHLVNLPSE
Sbjct: 1 MWYLCVFYHRLLSYRRAEVESLAEMFGVF------SSLEWRLPENQHPDSPFHLVNLPSE 54
Query: 1651 DIAKSIANRSILVKGIYELWGEGSSYEELEEAIKAYPEERKLPYLASGTTFRIIVDSFGK 1472
DIA++IANRSILVKGIYELWGEGSS+E+LEEAIK+YPE+RKLPYL TTF++ VDSFGK
Sbjct: 55 DIARNIANRSILVKGIYELWGEGSSFEQLEEAIKSYPEDRKLPYLTCETTFKVTVDSFGK 114
Query: 1471 AISFQEQNERIYGFKYIPFKGRVNLKNPEHKFWLIETDEYGSNNGLPPVVQRRIFFGREV 1292
AISFQEQN+RI YIPFKGRVNLKNP+ FWLIETD+YG+ NGLPPVVQ+RIFFGR V
Sbjct: 115 AISFQEQNDRIKSLAYIPFKGRVNLKNPDINFWLIETDDYGAPNGLPPVVQKRIFFGRLV 174
Query: 1291 GAADRKLLPTYELKSRKYLGPTAMDAEMAFLMANQALVTPGKLVYDPFVGTGSILVGAAH 1112
G ADRKLLPTY+LKSR+YLGPTAMDAEMAFLMANQALV PGKLVYDPFVGTGSILV AAH
Sbjct: 175 GGADRKLLPTYQLKSRRYLGPTAMDAEMAFLMANQALVMPGKLVYDPFVGTGSILVAAAH 234
Query: 1111 YGAMTM 1094
+GAMTM
Sbjct: 235 FGAMTM 240
Score = 337 bits (864), Expect = 6e-90
Identities = 161/234 (68%), Positives = 184/234 (78%), Gaps = 1/234 (0%)
Frame = -1
Query: 951 GADIDIRVVRDGRGPECNVWSNFEQYGLPMPVSLLRADNNLPPWRPGLKEVFDAIICDPP 772
GADIDIR VRDGRGP+CNVWSNF+QYGLP+PV+LLRADNNLPPWR GLKE+FDAIICDPP
Sbjct: 241 GADIDIRAVRDGRGPDCNVWSNFKQYGLPLPVALLRADNNLPPWRSGLKEIFDAIICDPP 300
Query: 771 YXXXXXXXXXXXXXXXXGTVDPYTVPDDKRLDHIPSTAPYSLAECIHDLFELAARMLVMG 592
Y G V PYTVPDDKR DHIPSTAPYSLAEC+HDL +LAARMLVMG
Sbjct: 301 YGVRAGGRKSGGRKLLKGIVGPYTVPDDKRTDHIPSTAPYSLAECVHDLLDLAARMLVMG 360
Query: 591 GRLVFFYPVLREDGSTDTHFPEHPCFTLVAACEQILSFRYSRILLTMVKKGPYSEDIAEA 412
GRLV+FYPVLRED + HFPEHPCF L+A+ EQILS RYSR+L+TMVK G Y++ +AEA
Sbjct: 361 GRLVYFYPVLREDDVMENHFPEHPCFKLIASSEQILSSRYSRVLVTMVKTGSYTDKVAEA 420
Query: 411 AVKMHLDFRENHLKWLEDGKLHSAVFSPNDSQTA-SAESKLNKDSKPKYRGKYV 253
A H +F+EN++KWLE G LHS+VF P +SKL K+ KPKYRGKYV
Sbjct: 421 AKIKHQEFKENYVKWLEHGNLHSSVFGPAHLHLGEETDSKLCKELKPKYRGKYV 474