BLASTX nr result

ID: Coptis25_contig00011098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011098
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN27139.1| unknown [Zea mays]                                      91   8e-17
ref|XP_002266115.1| PREDICTED: glycine-rich protein 2b-like [Vit...    91   1e-16
ref|XP_002453214.1| hypothetical protein SORBIDRAFT_04g001720 [S...    90   2e-16
emb|CAN59784.1| hypothetical protein VITISV_042163 [Vitis vinifera]    90   2e-16
gb|AFW66563.1| hypothetical protein ZEAMMB73_047398 [Zea mays]         89   4e-16

>gb|ACN27139.1| unknown [Zea mays]
          Length = 187

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
 Frame = +3

Query: 3   RGYGFITPSSGGEDVFVHYSSIKSKVFKSLSPDEDVEFQIGMGYDGRDRAVDVS----VL 170
           +G+GFI+P  G ED+FVH SSIKS+ F+SL+  E+VEF +  G DGR +AVDV+      
Sbjct: 18  KGFGFISPEDGSEDLFVHQSSIKSEGFRSLAEGEEVEFSVSEGDDGRTKAVDVTGPDGSF 77

Query: 171 GRDDGGGHTNSGFCNQGTTRRFN*SGCCYQCGGEGHFAREC 293
            R  GGG+   G+   G        G C++CG  GH AR+C
Sbjct: 78  VRGGGGGYGGGGYGGGGYGGGGGGGGGCFKCGEPGHMARDC 118


>ref|XP_002266115.1| PREDICTED: glycine-rich protein 2b-like [Vitis vinifera]
          Length = 241

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 57/118 (48%), Positives = 69/118 (58%), Gaps = 21/118 (17%)
 Frame = +3

Query: 3   RGYGFITPSSGGEDVFVHYSSIKSKVFKSLSPDEDVEFQIGMGYDGRDRAVDV------S 164
           +G+GFITP+ GGED+FVH SSIKS  F+SL   E VEFQI +G DGR +AVDV      S
Sbjct: 17  KGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGRTKAVDVTGPDGSS 76

Query: 165 VLG--RDD---------GGGHTNSGFCNQGTT--RRFN*SG--CCYQCGGEGHFAREC 293
           V G  RD+          GG +  G+ +   T  R  N  G   CY CGG GH AR+C
Sbjct: 77  VQGSKRDNYGGGGGGGGRGGRSGGGYGSGWRTGDRGGNGGGGAACYNCGGTGHLARDC 134


>ref|XP_002453214.1| hypothetical protein SORBIDRAFT_04g001720 [Sorghum bicolor]
           gi|241933045|gb|EES06190.1| hypothetical protein
           SORBIDRAFT_04g001720 [Sorghum bicolor]
          Length = 251

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 51/124 (41%), Positives = 69/124 (55%), Gaps = 25/124 (20%)
 Frame = +3

Query: 3   RGYGFITPSSGGEDVFVHYSSIKSKVFKSLSPDEDVEFQIGMGYDGRDRAVDVS------ 164
           +G+GFI+P  G ED+FVH SSIKS+ F+SL+  E+VEF +  G DGR +AVDV+      
Sbjct: 18  KGFGFISPEDGSEDLFVHQSSIKSEGFRSLAEGEEVEFSVSEGDDGRTKAVDVTGPDGSY 77

Query: 165 VLGRDDGGGHTNSGFCNQ------GTTRRFN*S-------------GCCYQCGGEGHFAR 287
           V G   GGG    G+ ++      G  R +  S             G CY+CG  GH AR
Sbjct: 78  VKGGSGGGGGGGGGYGSRGGGGSGGGGRSYGGSWGGGRRSGGGGGAGACYKCGEPGHMAR 137

Query: 288 ECPN 299
           +CP+
Sbjct: 138 DCPS 141


>emb|CAN59784.1| hypothetical protein VITISV_042163 [Vitis vinifera]
          Length = 247

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 57/118 (48%), Positives = 68/118 (57%), Gaps = 21/118 (17%)
 Frame = +3

Query: 3   RGYGFITPSSGGEDVFVHYSSIKSKVFKSLSPDEDVEFQIGMGYDGRDRAVDV------S 164
           +G+GFITP+ GGED+FVH SSIKS  F+SL   E VEFQI +G DGR +AVDV      S
Sbjct: 17  KGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGRTKAVDVTGPDGSS 76

Query: 165 VLG--RD---------DGGGHTNSGFCNQGTT--RRFN*SG--CCYQCGGEGHFAREC 293
           V G  RD           GG +  G+ +   T  R  N  G   CY CGG GH AR+C
Sbjct: 77  VQGSKRDXYGGGGGGGGRGGRSGGGYGSGWRTGDRGGNGGGGAACYNCGGTGHLARDC 134


>gb|AFW66563.1| hypothetical protein ZEAMMB73_047398 [Zea mays]
          Length = 188

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
 Frame = +3

Query: 3   RGYGFITPSSGGEDVFVHYSSIKSKVFKSLSPDEDVEFQIGMGYDGRDRAVDV-----SV 167
           +G+GFI+P  G ED+FVH SSIKS+ F+SL+  E+VEF +  G DGR +AVDV     S 
Sbjct: 18  KGFGFISPEDGSEDLFVHQSSIKSEGFRSLAEGEEVEFSVSEGDDGRTKAVDVTGPDGSF 77

Query: 168 LGRDDGGGHTNSGFCNQGTTRRFN*SGCCYQCGGEGHFAREC 293
           +    GGG    G+   G        G C++CG  GH AR+C
Sbjct: 78  VRGGGGGGGGGGGYGGGGYGGGGGGGGGCFKCGEPGHMARDC 119


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