BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011096
         (1488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    71   6e-10
gb|EAZ03196.1| hypothetical protein OsI_25347 [Oryza sativa Indi...    57   1e-05

>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 71.2 bits (173), Expect = 6e-10
 Identities = 98/448 (21%), Positives = 181/448 (40%), Gaps = 26/448 (5%)
 Frame = -2

Query: 1466 SYFWKGVKNSLEAVWEGLVWSLGNGSSISTFTEPWMI---LNNKPATLSDHVK----ADL 1308
            SY W+ +  +   V EG  WS+G+G+ I  + + W++   +  KP +L +  K    ADL
Sbjct: 1307 SYVWRNIWGAKRVVSEGYKWSIGSGTDICVWDQRWLVDGGVLQKPESLPEEFKELTVADL 1366

Query: 1307 SFSAVD--KSGYVKELVAEDNTNWNQERLGELFPTPI------KKHINLMSVRPDTQDRI 1152
              S       G ++ LV+ ++TN        +  TPI       +H++L + R D  + +
Sbjct: 1367 FISQTRFWNVGLLRNLVSNEDTN-------RILNTPIFEPNHLSQHVDLSTHRCD-GNWV 1418

Query: 1151 IRWRV---*NLMLVLNYSCGNCIYIWEA*PLGCHVEKTIQRKCELC-FCWKEIETDYHVF 984
            + W +     +   L  SC N +      P    ++       + C  C  E E   H+F
Sbjct: 1419 LLWNLKVPPKVKTFLWRSCRNAL------PTRVRLQDRGVNCTKTCALCENEDEDSMHLF 1472

Query: 983  FGCEWSRRLWMGSILGQRMMQNDDKDARFALDSFLNWGIQKQDFEGKYAKLYAICLLSAI 804
            F C  SR+ W    L  ++ Q    +  F +  F       Q+ +     ++A C++ +I
Sbjct: 1473 FYCTKSRQCWQQLGLWSKVQQKAQLNLSFGVTMF----EILQELDSSQRVIWA-CVMWSI 1527

Query: 803  WVCINKFKFEGQEI---RVQDIYKNVYTHTEQVTEAYKKETDTPRKTATLDTMVESTRTE 633
            W   N   +  + +    V+D   N+ T  +   + ++K                     
Sbjct: 1528 WKQRNDCIWRNEVMTTAAVRDRGLNLLTGWQNAQDIWRK--------------------- 1566

Query: 632  QMKHENWHRIYGDGAYEKDTGRGAAAIC-KGQDGRLIGAVYS-KFKCQNAMQAECRGVEL 459
                E   +   D A+ K++ R    IC +   GRL+ A  S      +  + E  G+  
Sbjct: 1567 --PDEGHFKCNVDAAFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLY 1624

Query: 458  AIILAQKLQIKNMVILGDNQRLVKTLAAGESTLVWDSEEDYNRIKNTMREYNENYPSVIV 279
            AI  A++  + N+    D++R+V +          ++  D + +   +RE    + S   
Sbjct: 1625 AIRWAKEQNLNNITFELDSKRVVYSF--------HNTRNDVSDLGAIIRECRTTFSSFFT 1676

Query: 278  --KFFWLNRNSNRDVNQLAKWANKYAGI 201
              +  ++ R +N  V+ LA+ A  YA I
Sbjct: 1677 NSRVEFIRRQANEVVHSLARAATFYASI 1704


>gb|EAZ03196.1| hypothetical protein OsI_25347 [Oryza sativa Indica Group]
          Length = 858

 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 84/437 (19%), Positives = 171/437 (39%), Gaps = 27/437 (6%)
 Frame = -2

Query: 1457 WKGVKNSLEAVWEGLVWSLGNGSSISTFTEPWMILNNKPATLSDHVKADLSFSAVDKSGY 1278
            WKG+++ LE + +G++W +GNG SI  + +PW+  N     +S      L         +
Sbjct: 429  WKGIEHGLELLKKGIIWRVGNGHSIRIWRDPWIPRNFSRKAISGKGSCRLR--------W 480

Query: 1277 VKELVAEDNTNWNQERLGELF-PTPIKKHINLMSVRPDTQDRIIRWRV*NLMLVLNYSCG 1101
            V +L+  D   W++ R+   F P   +  + + + R   +D  + W           S  
Sbjct: 481  VSDLLDSDGL-WDEHRVRHFFLPIDAEVILGIRTSRGRDED-FVAWHPDKF-----GSFS 533

Query: 1100 NCIYIWEA*PLGCHV-----EKTIQRKCELCFCWKEIETDYHVFFGCEWSRRLWMGSILG 936
              I+ W+A      +     ++ +++      C  E E   H    C  ++ LW+     
Sbjct: 534  VKIFAWKAITNSLAIMLNKKKRNLEQSSTCTICGIEEEDVAHALCRCPQAKFLWLA---- 589

Query: 935  QRMMQNDDKDARFALD---SFLNWGIQKQDFEGKYAKLYAICLLSAIWVCINKFKFEGQE 765
                  +  D  F  D   +  +W + + +   +  ++  + LL   W   N+       
Sbjct: 590  ----LRNSNDIGFVPDGRWTGSDWILNQLEILVEPDRVMFLLLLWRAWHIRNEVVHGKHA 645

Query: 764  IRVQDIYKNVYT-HTEQVTEAYKKETDTPRKTATLDTMVESTRTEQMKHE---------- 618
              ++  ++ + + HT  +      + D  +    +  MV  +   Q + E          
Sbjct: 646  PPIEASHRFIVSYHTSLLEIKQFPKADLTKGKHVIGQMVGHSGRHQRQPETLPYTWKKPD 705

Query: 617  -NWHRIYGDGAYEKDTGRGA-AAICKGQDGRLI-GAVYSKFKCQNAMQAECRGVELAIIL 447
              W ++  DG++++  G G   AI +   G ++  +  S  +C  A++AE       + L
Sbjct: 706  TGWMKLNVDGSFQEHDGSGGIGAILRNSAGEVVFASCGSMNRCGGALEAELLACRDGLTL 765

Query: 446  AQKLQIKNMVILGDNQRLVKTLAAGESTLVWDSEEDYNRIKNTMREYNE----NYPSVIV 279
              +  +  +VI  D  + ++        L+   EE+ + +   +RE       N   VI+
Sbjct: 766  VLQWTLLPIVIESDCLQAIQ--------LIQSKEEERSDLAFLIREIKHLMAGNRDIVIM 817

Query: 278  KFFWLNRNSNRDVNQLA 228
            K   ++RN N   + LA
Sbjct: 818  K---IHRNQNSVSHALA 831