BLASTX nr result
ID: Coptis25_contig00011096
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00011096 (1488 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 71 6e-10 gb|EAZ03196.1| hypothetical protein OsI_25347 [Oryza sativa Indi... 57 1e-05 >ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago truncatula] gi|355513943|gb|AES95566.1| Replication protein A 70 kDa DNA-binding subunit [Medicago truncatula] Length = 1723 Score = 71.2 bits (173), Expect = 6e-10 Identities = 98/448 (21%), Positives = 181/448 (40%), Gaps = 26/448 (5%) Frame = -2 Query: 1466 SYFWKGVKNSLEAVWEGLVWSLGNGSSISTFTEPWMI---LNNKPATLSDHVK----ADL 1308 SY W+ + + V EG WS+G+G+ I + + W++ + KP +L + K ADL Sbjct: 1307 SYVWRNIWGAKRVVSEGYKWSIGSGTDICVWDQRWLVDGGVLQKPESLPEEFKELTVADL 1366 Query: 1307 SFSAVD--KSGYVKELVAEDNTNWNQERLGELFPTPI------KKHINLMSVRPDTQDRI 1152 S G ++ LV+ ++TN + TPI +H++L + R D + + Sbjct: 1367 FISQTRFWNVGLLRNLVSNEDTN-------RILNTPIFEPNHLSQHVDLSTHRCD-GNWV 1418 Query: 1151 IRWRV---*NLMLVLNYSCGNCIYIWEA*PLGCHVEKTIQRKCELC-FCWKEIETDYHVF 984 + W + + L SC N + P ++ + C C E E H+F Sbjct: 1419 LLWNLKVPPKVKTFLWRSCRNAL------PTRVRLQDRGVNCTKTCALCENEDEDSMHLF 1472 Query: 983 FGCEWSRRLWMGSILGQRMMQNDDKDARFALDSFLNWGIQKQDFEGKYAKLYAICLLSAI 804 F C SR+ W L ++ Q + F + F Q+ + ++A C++ +I Sbjct: 1473 FYCTKSRQCWQQLGLWSKVQQKAQLNLSFGVTMF----EILQELDSSQRVIWA-CVMWSI 1527 Query: 803 WVCINKFKFEGQEI---RVQDIYKNVYTHTEQVTEAYKKETDTPRKTATLDTMVESTRTE 633 W N + + + V+D N+ T + + ++K Sbjct: 1528 WKQRNDCIWRNEVMTTAAVRDRGLNLLTGWQNAQDIWRK--------------------- 1566 Query: 632 QMKHENWHRIYGDGAYEKDTGRGAAAIC-KGQDGRLIGAVYS-KFKCQNAMQAECRGVEL 459 E + D A+ K++ R IC + GRL+ A S + + E G+ Sbjct: 1567 --PDEGHFKCNVDAAFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLY 1624 Query: 458 AIILAQKLQIKNMVILGDNQRLVKTLAAGESTLVWDSEEDYNRIKNTMREYNENYPSVIV 279 AI A++ + N+ D++R+V + ++ D + + +RE + S Sbjct: 1625 AIRWAKEQNLNNITFELDSKRVVYSF--------HNTRNDVSDLGAIIRECRTTFSSFFT 1676 Query: 278 --KFFWLNRNSNRDVNQLAKWANKYAGI 201 + ++ R +N V+ LA+ A YA I Sbjct: 1677 NSRVEFIRRQANEVVHSLARAATFYASI 1704 >gb|EAZ03196.1| hypothetical protein OsI_25347 [Oryza sativa Indica Group] Length = 858 Score = 57.4 bits (137), Expect = 1e-05 Identities = 84/437 (19%), Positives = 171/437 (39%), Gaps = 27/437 (6%) Frame = -2 Query: 1457 WKGVKNSLEAVWEGLVWSLGNGSSISTFTEPWMILNNKPATLSDHVKADLSFSAVDKSGY 1278 WKG+++ LE + +G++W +GNG SI + +PW+ N +S L + Sbjct: 429 WKGIEHGLELLKKGIIWRVGNGHSIRIWRDPWIPRNFSRKAISGKGSCRLR--------W 480 Query: 1277 VKELVAEDNTNWNQERLGELF-PTPIKKHINLMSVRPDTQDRIIRWRV*NLMLVLNYSCG 1101 V +L+ D W++ R+ F P + + + + R +D + W S Sbjct: 481 VSDLLDSDGL-WDEHRVRHFFLPIDAEVILGIRTSRGRDED-FVAWHPDKF-----GSFS 533 Query: 1100 NCIYIWEA*PLGCHV-----EKTIQRKCELCFCWKEIETDYHVFFGCEWSRRLWMGSILG 936 I+ W+A + ++ +++ C E E H C ++ LW+ Sbjct: 534 VKIFAWKAITNSLAIMLNKKKRNLEQSSTCTICGIEEEDVAHALCRCPQAKFLWLA---- 589 Query: 935 QRMMQNDDKDARFALD---SFLNWGIQKQDFEGKYAKLYAICLLSAIWVCINKFKFEGQE 765 + D F D + +W + + + + ++ + LL W N+ Sbjct: 590 ----LRNSNDIGFVPDGRWTGSDWILNQLEILVEPDRVMFLLLLWRAWHIRNEVVHGKHA 645 Query: 764 IRVQDIYKNVYT-HTEQVTEAYKKETDTPRKTATLDTMVESTRTEQMKHE---------- 618 ++ ++ + + HT + + D + + MV + Q + E Sbjct: 646 PPIEASHRFIVSYHTSLLEIKQFPKADLTKGKHVIGQMVGHSGRHQRQPETLPYTWKKPD 705 Query: 617 -NWHRIYGDGAYEKDTGRGA-AAICKGQDGRLI-GAVYSKFKCQNAMQAECRGVELAIIL 447 W ++ DG++++ G G AI + G ++ + S +C A++AE + L Sbjct: 706 TGWMKLNVDGSFQEHDGSGGIGAILRNSAGEVVFASCGSMNRCGGALEAELLACRDGLTL 765 Query: 446 AQKLQIKNMVILGDNQRLVKTLAAGESTLVWDSEEDYNRIKNTMREYNE----NYPSVIV 279 + + +VI D + ++ L+ EE+ + + +RE N VI+ Sbjct: 766 VLQWTLLPIVIESDCLQAIQ--------LIQSKEEERSDLAFLIREIKHLMAGNRDIVIM 817 Query: 278 KFFWLNRNSNRDVNQLA 228 K ++RN N + LA Sbjct: 818 K---IHRNQNSVSHALA 831