BLASTX nr result
ID: Coptis25_contig00011055
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011055
(1825 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521772.1| conserved hypothetical protein [Ricinus comm... 127 8e-27
ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vit... 124 8e-26
ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|2... 101 6e-19
ref|XP_004139751.1| PREDICTED: F-box/kelch-repeat protein At3g23... 100 2e-18
ref|XP_004171022.1| PREDICTED: F-box/kelch-repeat protein At3g23... 96 3e-17
>ref|XP_002521772.1| conserved hypothetical protein [Ricinus communis]
gi|223538985|gb|EEF40582.1| conserved hypothetical
protein [Ricinus communis]
Length = 413
Score = 127 bits (320), Expect = 8e-27
Identities = 124/444 (27%), Positives = 191/444 (43%), Gaps = 40/444 (9%)
Frame = -3
Query: 1457 ANLVVEKKLVLIENQEDLDDKTICNERKSNGVVPYLSAGIISNIFTRLHIPEVRKCRYGC 1278
A V K L L+ E+ + ++ VPY ISNI RL + ++ R+ C
Sbjct: 2 AKSVGNKNLGLLRTVEERALSKKVEDEQNKQHVPYFHKDCISNILIRLPLQSLQSSRFVC 61
Query: 1277 VEWYNLTSSSYFIKAHLRRSNPGLIAI-PVS----------------------------- 1188
WY++ +SS FI AHLRRS LI + PV
Sbjct: 62 KLWYSIINSSIFIDAHLRRSESVLIYVKPVPNKRYSATSKPPEESNNFSVEASFLQSNSG 121
Query: 1187 --MILPSVPETPYIHPDYIQIKDEDVVISSVNLECNKFVEGACNGLVLLED--KENNLWV 1020
P + P +++ K+ ++ I N+ C + CNGL+LL++ K+ L V
Sbjct: 122 SIFAEPIMNSAPKFCIQFVEFKEGNMKIGEYNVNCLGNIRATCNGLILLDNKLKKGGLIV 181
Query: 1019 SNPVTGQVLTLPPGQVLTLPPCIQRTRFRDIKRAIRFVDSTGEYKVVSVVYVQETGLIGC 840
NPVT +++ LP G + + +D D+TGEYKVV ++ E G + C
Sbjct: 182 MNPVTRKLIALPLGTIYSP---------QDESYGFALSDTTGEYKVVH-LFRDELGYVSC 231
Query: 839 EVLVLGSSTWKWVYSPFECIFNVYLYGQRFISIGGVFHILVKSDPHLARDGDFSFVVSFD 660
E L L + WK V P +F +G R ++ G H + + D + ++VS +
Sbjct: 232 ETLNLRARFWKEVNGPSFGLFR--WFGYRPVAALGALHWIPQVDHN-------DYLVSME 282
Query: 659 TAEEKFYKSQHLSYWCR-HGDLVEIGGCLSIVAVNVDSPCQWDIWALKDLDSGKWDLQRT 483
EKF+ S L CR H ++E+GG L V DIW L+ L W Q +
Sbjct: 283 VDNEKFH-SVPLPKSCRIHDRIIEMGGLLCFV---THEELNIDIWNLRSLSGDVWTKQYS 338
Query: 482 INLTVLHSKFHENWFQSRIVGAFGNGRFLIVEQRGQIGWCCYLYDVELQFLKPLE----- 318
I + RI G ++ +R + G Y YD L+ ++ +E
Sbjct: 339 ITRGSIIDMV--PICSLRIGGE-------LIFKRDEDG-SFYSYDCRLKEMRKVEMDKKC 388
Query: 317 LAFYTTYYFTPHVESLVAF*KPRD 246
L F+ TY PHV SL+++ K +D
Sbjct: 389 LPFHGTY--LPHVNSLISWVKIQD 410
>ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vitis vinifera]
Length = 417
Score = 124 bits (311), Expect = 8e-26
Identities = 117/406 (28%), Positives = 175/406 (43%), Gaps = 39/406 (9%)
Frame = -3
Query: 1361 VPYLSAGIISNIFTRLHIPEVRKCRYGCVEWYNLTSSSYFIKAHLRRSN----------- 1215
VPYL SNI RL I + R C WY L +S FI AHLRRS
Sbjct: 31 VPYLPKDCFSNILVRLPIESLPSSRLVCKPWYKLINSPIFIDAHLRRSEVVLIFLTPIVK 90
Query: 1214 -----------------PGLIAIPVSMI-LPSVP--ETPYIHP------DYIQIKDEDVV 1113
P ++ V+++ L S P P I P +++IKD
Sbjct: 91 QETYLYPFSTRSISQEKPNTFSVEVNLLQLESTPLFHQPVIDPRRKSYIQFMEIKDGKSK 150
Query: 1112 ISSVNLECNKFVEGACNGLVLLED--KENNLWVSNPVTGQVLTLPPGQVLTLPPCIQRTR 939
I N+ C + + NGL+LLE+ K L V NPVT ++ LP G + +
Sbjct: 151 IGEFNISCMGEITASFNGLILLENKLKRGRLVVMNPVTRKLTELPLG-------TLSQPH 203
Query: 938 FRDIKRAIRFVDSTGEYKVVSVVYVQETGLIGCEVLVLGSSTWKWVYSPFECIFNVYLYG 759
A+ + ST EYKVV + + E I CE+L +G+ TW+ V P + + +G
Sbjct: 204 QESYGFALSY--STSEYKVVHLFH-DELRYINCEILNVGTRTWRPVNGPSFGL--ISWFG 258
Query: 758 QRFISIGGVFHILVKSDPHLARDGDFSFVVSFDTAEEKFYKSQHLSYWCRHGDLVEIGGC 579
+ +S G H + PH+ D ++VS EKF+ Q + H +VE+GG
Sbjct: 259 YKPVSAMGALHWV----PHI---NDNDYIVSLHLENEKFHTVQLPKSYRTHDGIVEMGGS 311
Query: 578 LSIVAVNVDSPCQWDIWALKDLDSGKWDLQRTINLTVLHSKFHENWFQSRIVGAFGNGRF 399
L V+ + + Q IW+LK L W Q I + F R
Sbjct: 312 LCFVS-HDEEMLQIGIWSLKGLSGEGWTKQHCITTGCILDMV--PLFSMRTTEE------ 362
Query: 398 LIVEQRGQIGWCCYLYDVELQFLKPLELAFYTTYYFTPHVESLVAF 261
+V +R + G Y YD +LQ ++ +++ + + PHV SLV++
Sbjct: 363 -MVFKRDEDG-SLYAYDFQLQVMRKIDMETPLSDCYLPHVNSLVSW 406
>ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|222835655|gb|EEE74090.1|
predicted protein [Populus trichocarpa]
Length = 426
Score = 101 bits (252), Expect = 6e-19
Identities = 99/416 (23%), Positives = 168/416 (40%), Gaps = 47/416 (11%)
Frame = -3
Query: 1367 GVVPYLSAGIISNIFTRLHIPEVRKCRYGCVEWYNLTSSSYFIKAHLRRSNPGLI----- 1203
G PY ISNI L + + R+ C WYN+ +S FI +H RRS LI
Sbjct: 35 GPAPYFHKDCISNILIWLPLESLPSSRFVCKPWYNIINSRTFIDSHFRRSESVLIFLKSV 94
Query: 1202 ---------------------------AIPVSMILPSVPETPYIHP-----------DYI 1137
++ V+++ ++ P P ++
Sbjct: 95 SRGRSYPYSRPDPFSMTSMPEEQGNTFSVEVALLQSNLKTVPIFGPHVTGSSSKFFIQFM 154
Query: 1136 QIKDEDVVISSVNLECNKFVEGACNGLVLLEDK-ENNLWVSNPVTGQVLTLPPGQVLTLP 960
+ K+ + + N+ C + CNGL+LL++ + L V NPVT +++TLP G +
Sbjct: 155 EFKEGKIKVGKYNVSCLGNIRATCNGLILLDNHVKKGLIVMNPVTRKLITLPLGTL---- 210
Query: 959 PCIQRTRFRDIKRAIRFVDSTGEYKVVSVVYVQETGLIGCEVLVLGSSTWKWVYSPFECI 780
+ TG+YK+V ++ E + CE L L + +W+ V P +
Sbjct: 211 -----CNYHKESYGFALNHVTGDYKLVH-LFRDEFEYVTCETLDLATRSWRAVNGPSFGL 264
Query: 779 FNVYLYGQRFISIGGVFHILVKSDPHLARDGDFSFVVSFDTAEEKFYKSQHLSYWCRHGD 600
FN +G +S G H + + D + F+VS + E+F+ H
Sbjct: 265 FN--WFGHAPVSAIGALHWIPQLD-------NSDFIVSMEVENERFHCIPLPHRCTTHDR 315
Query: 599 LVEIGGCLSIVAVNVDSPCQWDIWALKDLDSGKWDLQRTINLTVLHSKFHENWFQSRIVG 420
++E+GG L V DIW LK + G W Q +I L F RI G
Sbjct: 316 VMEMGGLLCFV---THEDLNIDIWNLKSVPEGIWTKQYSITKGSLIDMV--PLFSLRISG 370
Query: 419 AFGNGRFLIVEQRGQIGWCCYLYDVELQFLKPLEL---AFYTTYYFTPHVESLVAF 261
++ +R + G + YD + + ++ E+ ++ + PHV SL+++
Sbjct: 371 D-------VIFRRKEDG-SFHAYDFKSEVMREFEMDKERNLSSGAYLPHVNSLLSW 418
>ref|XP_004139751.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis
sativus]
Length = 401
Score = 99.8 bits (247), Expect = 2e-18
Identities = 103/434 (23%), Positives = 171/434 (39%), Gaps = 41/434 (9%)
Frame = -3
Query: 1439 KKLVLIENQEDLDDKTICNERKSNGVVPYLSAGIISNIFTRLHIPEVRKCRYGCVEWYNL 1260
KK L+ N E+ ++ ++PY+ +SNI RL + + + + C W+N+
Sbjct: 6 KKSELVRNVEE-------KRKQQESLIPYVHEDCVSNILIRLPLDSLHRSMFVCKHWFNI 58
Query: 1259 TSSSYFIKAHLRRSNPGLIAIPVSM-------ILPSVP----------ETPYIHP----- 1146
S F++ H RS LI + + PS+P E Y+
Sbjct: 59 ICSPTFVETHFHRSESVLIFTAPTRYEETSHHLTPSLPHSGKSNTLSIEAKYMQSSESLS 118
Query: 1145 -------------DYIQIKDEDVVISSVNLECNKFVEGACNGLVLLED--KENNLWVSNP 1011
+++ +D + +L C + CNGL+LL++ K L V NP
Sbjct: 119 LFHNLEPTSKRFIQFLEFQDGISNVGEYSLSCFGQIRATCNGLILLDNKLKIGGLIVINP 178
Query: 1010 VTGQVLTLPPGQVLTLPPCIQRTRFRDIKRAIRFVDSTGEYKVVSVVYVQETGLIGCEVL 831
VT ++ LPPG + + + + +G YKVV ++ I CE+
Sbjct: 179 VTRKLTALPPGTL---------NSSHNESYGFAYDNISGRYKVVH-LFRDALMYISCEIF 228
Query: 830 VLGSSTWKWVYSPFECIFNVYLYGQRFISIGGVFHILVKSDPHLARDGDFSFVVSFDTAE 651
+LG+ W+ V P +F +G + + G H + + + S +
Sbjct: 229 ILGTENWRAVDGPPFGLFG--WFGYKPVEAIGALH-------WIPQVNHSDCIASLEIEN 279
Query: 650 EKFYKSQHLSYWCRHGDLVEIGGCLSIVAVNVDSPCQWDIWALKDLDSGKWDLQRTINLT 471
EKF + R+ +VEIG LS V DIW LK L W Q +IN+
Sbjct: 280 EKFQTIPLPNSCNRYDGIVEIGSSLSYV---THMETHTDIWILKGLSGEIWIKQHSINIG 336
Query: 470 VLHSKFHENWFQSRIVGAFGNGRFLIVEQRGQIGWCCYLYDVELQFLKPLE----LAFYT 303
F+ R G + + G Y+YD EL+ + +E L +
Sbjct: 337 CRMDMVPLLSFRIR-------GDLIFKSKDGFF----YIYDFELRSITKVEDKKRLRVSS 385
Query: 302 TYYFTPHVESLVAF 261
+ F PHV S+V++
Sbjct: 386 DFLF-PHVNSMVSW 398
>ref|XP_004171022.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis
sativus]
Length = 390
Score = 95.9 bits (237), Expect = 3e-17
Identities = 86/359 (23%), Positives = 142/359 (39%), Gaps = 37/359 (10%)
Frame = -3
Query: 1439 KKLVLIENQEDLDDKTICNERKSNGVVPYLSAGIISNIFTRLHIPEVRKCRYGCVEWYNL 1260
KK L+ N E+ ++ ++PY+ +SNI RL + + + + C W+N+
Sbjct: 6 KKSELVRNVEE-------KRKQQESLIPYVHEDCVSNILIRLPLDSLHRSMFVCKHWFNI 58
Query: 1259 TSSSYFIKAHLRRSNPGLIAIPVSM-------ILPSVP----------ETPYIHP----- 1146
S F++ H RS LI + + PS+P E Y+
Sbjct: 59 ICSPTFVETHFHRSESVLIFTAPTRYEETSHHLTPSLPHSGKSNTLSIEAKYMQSSESLS 118
Query: 1145 -------------DYIQIKDEDVVISSVNLECNKFVEGACNGLVLLED--KENNLWVSNP 1011
+++ +D + +L C + CNGL+LL++ K L V NP
Sbjct: 119 LFHNLEPTSKRFIQFLEFQDGISNVGEYSLSCFGQIRATCNGLILLDNKLKIGGLIVINP 178
Query: 1010 VTGQVLTLPPGQVLTLPPCIQRTRFRDIKRAIRFVDSTGEYKVVSVVYVQETGLIGCEVL 831
VT ++ LPPG + + + + +G YKVV ++ I CE+
Sbjct: 179 VTRKLTALPPGTL---------NSSHNESYGFAYDNVSGRYKVVH-LFRDALMYISCEIF 228
Query: 830 VLGSSTWKWVYSPFECIFNVYLYGQRFISIGGVFHILVKSDPHLARDGDFSFVVSFDTAE 651
+LG+ W+ V P +F +G + + G H + + + S +
Sbjct: 229 ILGTENWRAVDGPPFGLFG--WFGYKPVEAIGALH-------WIPQVNHSDCIASLEIEN 279
Query: 650 EKFYKSQHLSYWCRHGDLVEIGGCLSIVAVNVDSPCQWDIWALKDLDSGKWDLQRTINL 474
EKF + R+ +VEIG LS V DIW LK L W Q +IN+
Sbjct: 280 EKFQTIPLPNSCNRYDGIVEIGSSLSYV---THMETHTDIWILKGLSGEIWIKQHSINI 335