BLASTX nr result

ID: Coptis25_contig00011049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011049
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich...   202   1e-49
ref|XP_002269779.2| PREDICTED: putative disease resistance prote...   185   1e-44
emb|CAN60801.1| hypothetical protein VITISV_022857 [Vitis vinifera]   184   2e-44
ref|XP_002513078.1| leucine-rich repeat-containing protein, puta...   177   2e-42
ref|XP_002532127.1| leucine-rich repeat containing protein, puta...   171   2e-40

>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1093

 Score =  202 bits (513), Expect = 1e-49
 Identities = 109/281 (38%), Positives = 174/281 (61%), Gaps = 10/281 (3%)
 Frame = +2

Query: 62  FASAAVQVVLERLWDFMVREIGAMLNANEGFKKLERTLLRVQAMLDDVEDKEISHKAWKI 241
           F SA +QV LE L   ++RE GA +  ++  KKL RTL ++QA+L+D E ++I+  A K+
Sbjct: 9   FLSATLQVALENLASPILREFGARIGIDKDLKKLTRTLAKIQAVLNDAEARQINDMAVKL 68

Query: 242 WVRXXXXXXXXXXXXXXEIA-----MTSTSSSTRQVHMSSAPSFK---PHKMDDIQKKVD 397
           W+               E+A           ++  + +S    FK     K+ +I +++D
Sbjct: 69  WLSDLKEVAYDADDVLDEVATEAFRFNQEKKASSLISLSKDFLFKLGLAPKIKEINERLD 128

Query: 398 EIAREMEYLYMSKLVGSSQIKTKERPPIGSLLMEDENGVFGRESDKTKLTNVLLSDSL-- 571
           EIA+E + L + +  G++ I+T++R  + +  + DE+ VFGR+ DK ++ N+L+SD    
Sbjct: 129 EIAKERDELGLREGAGATWIETRDRERLQTSSLIDESCVFGRKEDKKEIVNLLVSDDYCG 188

Query: 572 ENVNVVSVVGMAGIGKTTLTQLVYNDAVISEHFQLRMWVSVNNDFDVRRITKSIIESATH 751
            +V V+ +VGM G+GKTTL QLV+ND  ++ HF L+MWV V++DF+ +R+TKSI+ES   
Sbjct: 189 NDVGVLPIVGMGGLGKTTLAQLVFNDETVARHFDLKMWVCVSDDFNAQRLTKSILESVER 248

Query: 752 NVIDLMDLDPLQVTLRSLLAKKKFFLVLDDVWNESYNDWNI 874
              DLMDL+ LQ +L+  L  K+F LVLDDVW+E  +DW++
Sbjct: 249 KSCDLMDLNILQTSLQDRLRGKRFLLVLDDVWHEKKSDWDV 289


>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 1091

 Score =  185 bits (470), Expect = 1e-44
 Identities = 111/279 (39%), Positives = 165/279 (59%), Gaps = 9/279 (3%)
 Frame = +2

Query: 62  FASAAVQVVLERLWDFMVREIGAMLNANEGFKKLERTLLRVQAMLDDVEDKEISHKAWKI 241
           F SAA Q+ LE+L   M +E+          KKL RTL ++QA+L D E ++I++ A K+
Sbjct: 7   FLSAAFQITLEKLASPMSKELEKRFG---DLKKLTRTLSKIQAVLSDAEARQITNAAVKL 63

Query: 242 WVRXXXXXXXXXXXXXXEIAMTSTSSSTRQVHMSSAPSFKPH-------KMDDIQKKVDE 400
           W+               E+ MT  S    Q  +S   S           K++ I +++DE
Sbjct: 64  WLGDVEEVAYDAEDVLEEV-MTEASRLKLQNPVSYLSSLSRDFQLEIRSKLEKINERLDE 122

Query: 401 IAREMEYLYMSKLVGSSQIKTKERPPIGSLLMEDENGVFGRESDKTKLTNVLLSDSL--E 574
           I +E + L + ++ G    +  +RP   SL+  +E+ V GRE +K ++  +L+SD     
Sbjct: 123 IEKERDGLGLREISGEK--RNNKRPQSSSLV--EESRVLGREVEKEEIVELLVSDEYGGS 178

Query: 575 NVNVVSVVGMAGIGKTTLTQLVYNDAVISEHFQLRMWVSVNNDFDVRRITKSIIESATHN 754
           +V V+ +VGM G+GKTTL QLVYND  +++HF+L+MWV V++DFDVRR TKS+++SAT  
Sbjct: 179 DVCVIPIVGMGGLGKTTLAQLVYNDEKVTKHFELKMWVCVSDDFDVRRATKSVLDSATGK 238

Query: 755 VIDLMDLDPLQVTLRSLLAKKKFFLVLDDVWNESYNDWN 871
             DLMDLD LQ  LR +L  K++ LVLDDVW E  +DW+
Sbjct: 239 NFDLMDLDILQSKLRDILKGKRYLLVLDDVWTEKKSDWD 277


>emb|CAN60801.1| hypothetical protein VITISV_022857 [Vitis vinifera]
          Length = 951

 Score =  184 bits (467), Expect = 2e-44
 Identities = 113/281 (40%), Positives = 165/281 (58%), Gaps = 11/281 (3%)
 Frame = +2

Query: 62  FASAAVQVVLERLWDFMVREIGAMLNANEGFKKLERTLLRVQAMLDDVEDKEISHKAWKI 241
           F SAA Q+ LE+L   M +E+          KKL  TL ++QA+L D E ++I++ A K+
Sbjct: 7   FLSAAFQITLEKLASPMSKELEKSFG---DLKKLTWTLSKIQAVLRDAEARQITNAAVKL 63

Query: 242 WVRXXXXXXXXXXXXXXEIAMTSTSSSTRQVHMSSAPSFK-------PHKMDDIQKKVDE 400
           W+               E+ MT       Q  + +  S           K++ I  ++DE
Sbjct: 64  WLSDVEEVAXDAEDVLXEV-MTEAXRXKXQNPVXNXSSLSRDFHXEIXSKLEKINMRLDE 122

Query: 401 IAREMEYLYMSKLVGSS--QIKTKERPPIGSLLMEDENGVFGRESDKTKLTNVLLSDSL- 571
           IA++ + L + +  G      +   RPP  SL+  DE+ VFGRE +K ++  +L+SD   
Sbjct: 123 IAKKGDELGLKERSGEKGHNARPNARPPSSSLV--DESSVFGREVEKEEILELLVSDEYG 180

Query: 572 -ENVNVVSVVGMAGIGKTTLTQLVYNDAVISEHFQLRMWVSVNNDFDVRRITKSIIESAT 748
             +V V+ +VGM G+GKTTL QLVYND  +++HF+L+MWV V++DFDVRR TKS+++SAT
Sbjct: 181 GSDVCVIPIVGMGGLGKTTLAQLVYNDEKVTKHFELKMWVCVSDDFDVRRATKSVLDSAT 240

Query: 749 HNVIDLMDLDPLQVTLRSLLAKKKFFLVLDDVWNESYNDWN 871
               DLMDLD LQ  LR +L  K++ LVLDDVW E  +DW+
Sbjct: 241 GKNFDLMDLDILQSKLRDILKGKRYLLVLDDVWTEKKSDWD 281


>ref|XP_002513078.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223548089|gb|EEF49581.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 1096

 Score =  177 bits (450), Expect = 2e-42
 Identities = 100/280 (35%), Positives = 161/280 (57%), Gaps = 9/280 (3%)
 Frame = +2

Query: 62  FASAAVQVVLERLWDFMVREIGAMLNANEGFKKLERTLLRVQAMLDDVEDKEISHKAWKI 241
           F SAA Q+ L  L   ++RE G     ++  +KL R L ++QA+L+D E K+I+  + K+
Sbjct: 8   FLSAAFQIALGHLASPILREFGCRFGIDKDLRKLTRNLSKIQAVLNDAEAKQITDYSVKL 67

Query: 242 WVRXXXXXXXXXXXXXXEIAMTST--SSSTRQVHMSSAPSFKPH---KMDDIQKKVDEIA 406
           W+               E++  +   +   +  ++ S   FK     K+ +I +++DEIA
Sbjct: 68  WLNELKEVAYDADDVLDEVSTQAFRYNQQKKVTNLFSDFMFKYELAPKIKEINERLDEIA 127

Query: 407 REMEYLYMSKLVGSSQIKTKERPPIGSLLMEDENGVFGRESDKTKLTNVLLSDSLEN--- 577
           ++   L + +    +  +T++R  + +  + DE+ VFGR  D+ KL  +L+SD       
Sbjct: 128 KQRNDLDLKEGTRVTLTETRDRDRLQTSSLIDESRVFGRTDDQKKLVELLVSDENSGNDA 187

Query: 578 -VNVVSVVGMAGIGKTTLTQLVYNDAVISEHFQLRMWVSVNNDFDVRRITKSIIESATHN 754
            V VV ++GM G+GKTTL QLVYND +++E F+L+ W+ V+++F+V R+TKSI+ES    
Sbjct: 188 GVGVVPIIGMGGLGKTTLAQLVYNDPLVAEKFELKTWICVSDEFNVLRVTKSILESIERG 247

Query: 755 VIDLMDLDPLQVTLRSLLAKKKFFLVLDDVWNESYNDWNI 874
             +L+ LD LQ  LR  L  KKF +VLDDVWNE   DW +
Sbjct: 248 PCNLVSLDILQTNLRDKLRGKKFLVVLDDVWNEKQRDWEV 287


>ref|XP_002532127.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223528186|gb|EEF30247.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1142

 Score =  171 bits (434), Expect = 2e-40
 Identities = 96/271 (35%), Positives = 155/271 (57%), Gaps = 2/271 (0%)
 Frame = +2

Query: 65  ASAAVQVVLERLWDFMVREIGAMLNANEGFKKLERTLLRVQAMLDDVEDKEISHKAWKIW 244
           A A +Q+VLE L   +  E+G +L  ++  + L   L  +QA+L+D E+K++  +A K W
Sbjct: 2   AEAFLQIVLENLDSLIQNEVGLLLGIDKEMESLSSILSTIQAVLEDAEEKQLKDRAIKNW 61

Query: 245 VRXXXXXXXXXXXXXXEIAMTSTSSSTRQVHMSSAPSFKPHKMDDIQKKVDEIAREMEYL 424
           +R              E    ST +ST Q            ++  +++ +DEIA E    
Sbjct: 62  LRKLKDAVYKVDDILDEC---STKASTFQYKGQQIGK----EIKAVKENLDEIAEERRKF 114

Query: 425 YMSKLVGSSQIKTKERPPIGSLLMEDENGVFGRESDKTKLTNVLLSD--SLENVNVVSVV 598
           ++ ++V +   +  ER   GS+  + +  V+GR+ DK K+ + L+      ++V+V  ++
Sbjct: 115 HLLEVVANRPAEVIERCQTGSIATQSQ--VYGRDQDKEKVIDSLVDQISDADDVSVYPII 172

Query: 599 GMAGIGKTTLTQLVYNDAVISEHFQLRMWVSVNNDFDVRRITKSIIESATHNVIDLMDLD 778
           GM G+GKTTL QLVYND  +  HF LR+WV V+ +FDVRR+ K+IIESA+ N    +DLD
Sbjct: 173 GMGGLGKTTLAQLVYNDERVKRHFDLRIWVCVSGEFDVRRLVKTIIESASGNACPCLDLD 232

Query: 779 PLQVTLRSLLAKKKFFLVLDDVWNESYNDWN 871
           PLQ  L+ +L+ K++ +VLD VWN   + W+
Sbjct: 233 PLQRQLQEILSGKRYLIVLDHVWNGDQDKWD 263


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