BLASTX nr result

ID: Coptis25_contig00011048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011048
         (2008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274278.1| PREDICTED: uncharacterized protein LOC100259...   355   2e-95
ref|XP_002524810.1| conserved hypothetical protein [Ricinus comm...   319   2e-84
ref|XP_002321059.1| predicted protein [Populus trichocarpa] gi|2...   301   3e-79
ref|XP_002301565.1| predicted protein [Populus trichocarpa] gi|2...   288   5e-75
ref|XP_003518932.1| PREDICTED: uncharacterized protein LOC100800...   281   4e-73

>ref|XP_002274278.1| PREDICTED: uncharacterized protein LOC100259706 [Vitis vinifera]
            gi|296086692|emb|CBI32327.3| unnamed protein product
            [Vitis vinifera]
          Length = 429

 Score =  355 bits (912), Expect = 2e-95
 Identities = 214/437 (48%), Positives = 272/437 (62%), Gaps = 19/437 (4%)
 Frame = -2

Query: 1785 MVELCLTIASSSSYVPGLLFHHEQALCRSSKEVLSVVPSSGRKQEILRSG---------- 1636
            M ELCL   +   Y PGL+FH EQ +CR SK+   ++ S G +QE  RSG          
Sbjct: 1    MAELCLM--ACHGYPPGLVFHPEQGMCRVSKDCQPLLGSPGPRQESTRSGLNLRPLQREE 58

Query: 1635 TRSPMGWLFS-------DQSDRKPVLIDVQDTRPDSMHFSFGISEHYTRREKIMQYLVSG 1477
            T  P+  L         DQ+  + VL+D QDT P S+ FS  I+E  TR EKI+Q+L+S 
Sbjct: 59   TWKPLSGLLESDQFVKIDQTVSRHVLLDAQDTLPGSVLFSLAIAEQCTRHEKILQFLMSR 118

Query: 1476 SSVSDKDGLDFXXXXXXXXXXXSAIEMRLRSLGVHGDGRYLYEVGDDESQPSVVYPS-DY 1300
            SS  +K  LD            S+  M+ + +    D  +     D E+QP+++YPS + 
Sbjct: 119  SSEIEKGELDLSVLSDLMGIQASSTGMQEQPV----DPGFCSCYQDTEAQPALIYPSSEL 174

Query: 1299 YMQKPLLEPMADSALFSKIRVHPDGRALFTGTEIEMKDFISVFAEFYPSKKSVEWRKQSL 1120
            + QKP ++ + D A  SK+ VHPDGR  F GT  EMKD +SV AEFY SK S +  KQSL
Sbjct: 175  HAQKPFVDFVGDLARSSKLIVHPDGRVSFMGTGTEMKDLLSVVAEFYLSKNSTKHGKQSL 234

Query: 1119 LVPHFTRLETEPHMNIHGSSLTMETTTFPPLKSPETVKLXXXXXXXXXXKAGREKDLCRR 940
            LVPHFTRLE     +  GSSL +ET    PLKSPE  KL          K  RE+DL  +
Sbjct: 235  LVPHFTRLE---RADTKGSSLKVETVV-APLKSPEKTKLKPSPKKKNGRKGCRERDLYEK 290

Query: 939  SSFHAFECLLSLILDKRRG-KEALLSVKQSGSELPPLLTQFSAGIAGTGLAVIFSVVLNV 763
            + FHA E LLS++++KR+  K A LS+K+SG ELP LLTQFSAGIAGTGLAV+FSV+  V
Sbjct: 291  NYFHACESLLSIMMNKRQQRKTAFLSLKKSGPELPELLTQFSAGIAGTGLAVLFSVICKV 350

Query: 762  SSRKAPFCAPTMLNTGFGFGLVWLSWGVNKLRDTIAHISKSSSKPGFNEKDMMRNVDRSV 583
            +  + PFCA   L+TGFGFGLVWLSW VNKLRDT+ HISK S K    E++MM+ VDRSV
Sbjct: 351  ACGRVPFCASKFLSTGFGFGLVWLSWAVNKLRDTVVHISKKSGKLALKEEEMMKRVDRSV 410

Query: 582  NDIFLRAATIMAIAVLR 532
            N+IF RAAT+M +AVLR
Sbjct: 411  NEIFFRAATVMTVAVLR 427


>ref|XP_002524810.1| conserved hypothetical protein [Ricinus communis]
            gi|223535994|gb|EEF37653.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 419

 Score =  319 bits (817), Expect = 2e-84
 Identities = 202/442 (45%), Positives = 263/442 (59%), Gaps = 22/442 (4%)
 Frame = -2

Query: 1785 MVELCLTIASSSSYVPGLLFHHEQALCRSSKEVLSVVPSSGRKQEILRSGT--------- 1633
            MV+LCL  +       GL+F  EQ   R  K+     P  G + EI R  +         
Sbjct: 1    MVKLCLMASHGYPLGNGLVFVPEQT--RVLKDSQPYFPCQGARHEIKRPNSLSVEPCQHE 58

Query: 1632 --RSPMGWLFSDQSDR------KPVLIDVQDTRPDSMHFSFGISEHYTRREKIMQYLVSG 1477
              R   G+    Q  R      +PVLIDVQDT PDS+ FSFGI+E  T+ EKI+++L SG
Sbjct: 59   PWRPVNGFCDRTQFARIDSPVGRPVLIDVQDTCPDSVLFSFGIAEQCTKHEKILKFLTSG 118

Query: 1476 SSVSDKDGLDFXXXXXXXXXXXSAIEMRLRSLGVHGDGRYLYEVGDDESQPS--VVYPSD 1303
            SS  +K GLD                M L++L           V D   QP   ++YP+ 
Sbjct: 119  SSELEKSGLDLSLLSDL---------MDLQAL-----------VLDVHQQPCSPLIYPNG 158

Query: 1302 YY-MQKPLLEPMADSALFSKIRVHPDGRALFTGTEIEMKDFISVFAEFYPSKKSVEWRKQ 1126
                 KPL++ + D A  SKI VHPDGR L TG+  EMKD +S+ AEFY SK S  W KQ
Sbjct: 159  SCDAPKPLVDFVGDLASSSKITVHPDGRVLLTGSGTEMKDILSIVAEFYLSKTSTTWTKQ 218

Query: 1125 SLLVPHFTRLE-TEPHMNIHGSSLTMETTTFPPLKSPETVKLXXXXXXXXXXKAGREKDL 949
            S+LVP F     +E   N+  SSL ++  T  PL+S E +KL          K  +E+DL
Sbjct: 219  SMLVPRFAWPHISETQANVLNSSLNVKDVT-APLRSSEKIKLKPSPKKKSCRKGNKERDL 277

Query: 948  CRRSSFHAFECLLSLILDKRR-GKEALLSVKQSGSELPPLLTQFSAGIAGTGLAVIFSVV 772
             +R+ FHA E LLSL++DK+R GK A+LS+K+SG ELP LLTQFSAGIAGTGLAV+FSVV
Sbjct: 278  YQRNYFHACESLLSLMMDKKRHGKTAILSLKKSGPELPSLLTQFSAGIAGTGLAVLFSVV 337

Query: 771  LNVSSRKAPFCAPTMLNTGFGFGLVWLSWGVNKLRDTIAHISKSSSKPGFNEKDMMRNVD 592
              V+  + PFC   + +TGFGFGLVWLSW VN+LRDTI +ISK++SK G  +++M+R VD
Sbjct: 338  CKVACGRMPFCTAKLFSTGFGFGLVWLSWAVNRLRDTIIYISKNASKLGLKDEEMLRIVD 397

Query: 591  RSVNDIFLRAATIMAIAVLRFA 526
            RS+ D++ RAAT+M +A LR A
Sbjct: 398  RSLKDVYFRAATLMVVAALRLA 419


>ref|XP_002321059.1| predicted protein [Populus trichocarpa] gi|222861832|gb|EEE99374.1|
            predicted protein [Populus trichocarpa]
          Length = 418

 Score =  301 bits (772), Expect = 3e-79
 Identities = 187/438 (42%), Positives = 253/438 (57%), Gaps = 20/438 (4%)
 Frame = -2

Query: 1785 MVELCLTIASSSSYVPGLLFHHEQALCRSSKEVLSVVPSSGRKQEILRSGTR-------- 1630
            MV+LCL  +      P ++FH +Q   R  K+    +PS G +QEI R  +         
Sbjct: 1    MVKLCLMASHGYPSAPAIVFHQDQK--RVFKDCQPYLPSQGTRQEITRLNSLVLKLHQHE 58

Query: 1629 ---SPMGWLFS-------DQSDRKPVLIDVQDTRPDSMHFSFGISEHYTRREKIMQYLVS 1480
                PM            D + R P L+DVQD RPDS+ FSFGI E  TR+EKI+Q+L+S
Sbjct: 59   EPWRPMNRFCESNRFTEIDSTVRTPTLVDVQDARPDSVLFSFGIVEKCTRQEKILQFLMS 118

Query: 1479 GSSVSDKDGLDFXXXXXXXXXXXSAIEMRLRSLGVHGDGRYLYEVGDDESQPSVVYPSDY 1300
             S+  ++DGLD                M L++  V  D + L       S   ++YPS  
Sbjct: 119  ESNKLERDGLDLSLLSEL---------MGLQT--VMFDAQQL-------SHSPLIYPSGQ 160

Query: 1299 Y-MQKPLLEPMADSALFSKIRVHPDGRALFTGTEIEMKDFISVFAEFYPSKKSVEWRKQS 1123
                K L++ +AD    SK+ V PDGR L TG+  EMKD +S  AEFY SK S  W+KQS
Sbjct: 161  LDAPKSLVDFVADMVCSSKLTVLPDGRVLLTGSGTEMKDVLSTVAEFYLSKNSTMWKKQS 220

Query: 1122 LLVPHFTRLET-EPHMNIHGSSLTMETTTFPPLKSPETVKLXXXXXXXXXXKAGREKDLC 946
            +L+P  TR +T +   NI GSS      +   LKSP  VK+          K GRE+DL 
Sbjct: 221  MLIPKLTRFDTSKVDANITGSSFKARDASSATLKSP--VKIKPSRKKKNNRKGGRERDLY 278

Query: 945  RRSSFHAFECLLSLILDKRRGKEALLSVKQSGSELPPLLTQFSAGIAGTGLAVIFSVVLN 766
            +R+ FHA E LLSL++DKRRGK A+L +K+SG ELP LL QFS GIAG GLA++FS++  
Sbjct: 279  KRNYFHACESLLSLMMDKRRGKTAVLLLKKSGPELPELLNQFSVGIAGAGLALLFSIICR 338

Query: 765  VSSRKAPFCAPTMLNTGFGFGLVWLSWGVNKLRDTIAHISKSSSKPGFNEKDMMRNVDRS 586
            V+  +  FCA  + +T  G GLVWLSW V+KL+DT+ +ISK +SK G  ++++M  V+ S
Sbjct: 339  VACGRVSFCASKLFSTSVGLGLVWLSWAVSKLKDTVVYISKHASKLGLKDEEIMGIVNES 398

Query: 585  VNDIFLRAATIMAIAVLR 532
              DI+ RA T+MA+AVLR
Sbjct: 399  FRDIYFRAVTVMAVAVLR 416


>ref|XP_002301565.1| predicted protein [Populus trichocarpa] gi|222843291|gb|EEE80838.1|
            predicted protein [Populus trichocarpa]
          Length = 401

 Score =  288 bits (736), Expect = 5e-75
 Identities = 176/416 (42%), Positives = 239/416 (57%), Gaps = 34/416 (8%)
 Frame = -2

Query: 1677 VPSSGRKQEILRSGTRS-----------PMGWLFS-------DQSDRKPVLIDVQDTRPD 1552
            +PS G +QEI RS +             PM   +        D + + P+LIDVQD RPD
Sbjct: 9    LPSWGARQEITRSSSLMLKLPQHEQPWRPMNRFYQSNQFAEIDSTVKMPILIDVQDARPD 68

Query: 1551 SMHFSFGISEHYTRREKIMQYLVSGSSVSDKDGLDFXXXXXXXXXXXSAIEMRLRSLGVH 1372
            S+ F FGI E  TR EKI+Q+L+S S+  ++DGLD               +   +S   H
Sbjct: 69   SVLFIFGIVEKCTRHEKILQFLMSKSNKLERDGLDLSFLSELTGLQAVMFDAHQQSHSPH 128

Query: 1371 GDGRYLYEVGDDESQPSVVYPSDY--YMQKPLLEPMADSALFSKIRVHPDGRALFTGTEI 1198
                        +S   ++YPSD   Y++ P+ + + D A  SK+RV PDGR L TG+ +
Sbjct: 129  -----------QQSHSPLIYPSDQFDYLKSPV-DILGDMAHSSKLRVLPDGRVLLTGSGM 176

Query: 1197 EMKDFISVFAEFYPSKKSVEWRKQSLLVPHFTR-------LETEPHMN-------IHGSS 1060
            EMKD +S  AEFY S+ S  WRKQSLLVPH +R       L T+ HM        +  S 
Sbjct: 177  EMKDILSTVAEFYLSRNSNIWRKQSLLVPHLSRYGYLDLVLFTQKHMAAFFLVMLLKNSP 236

Query: 1059 LTMETTTFPPLKSPETVKLXXXXXXXXXXKAGREKDLCRRSSFHAFECLLSLILDKRRGK 880
            + +E    P  K   T K             GRE DL +R+ F+A E LLSL++D+R  K
Sbjct: 237  MHIEKEKLPSRKRKNTRK------------GGRESDLYKRNYFNACESLLSLMMDRRHEK 284

Query: 879  EALLSVKQSGSELPPLLTQFSAGIAGTGLAVIFSVVLNVSSRKAPFCAPTMLNTGFGFGL 700
             A+LS+++SG ELP LL Q S GIAGTGLA++FSV+  V+ R+ PF A  +  TG GFGL
Sbjct: 285  TAVLSLRKSGPELPLLLNQLSVGIAGTGLALLFSVICKVACRRVPFSACKLFCTGIGFGL 344

Query: 699  VWLSWGVNKLRDTIAHISKSSSKPGFNEKDMMRNVDRSVNDIFLRAATIMAIAVLR 532
            VWLSW VNKL+DT+ +ISK +SK G  +K+++R VD+S +DI+ RA T+MA+ VLR
Sbjct: 345  VWLSWAVNKLKDTVVYISKHASKVGLKDKEIIRIVDKSFHDIYFRAVTVMAVVVLR 400


>ref|XP_003518932.1| PREDICTED: uncharacterized protein LOC100800200 [Glycine max]
          Length = 416

 Score =  281 bits (720), Expect = 4e-73
 Identities = 181/438 (41%), Positives = 255/438 (58%), Gaps = 23/438 (5%)
 Frame = -2

Query: 1770 LTIASSSSYVPGLLFHHEQAL--CRSSKEVLSVVPSSGRKQEILRSGT---------RSP 1624
            L + +S    PGL    E A+  C  +K    ++PS   K EI+R G+         +S 
Sbjct: 5    LCLMASHGCPPGLSLQQELAMVGCTITKGCKPLLPSPVLKLEIIRYGSSLNPFEESSKSQ 64

Query: 1623 MGWLFSDQ------SDRKPVLIDVQDTRPDSMHFSFGISEHYTRREKIMQYLVSGSSVSD 1462
              W  S+Q      S ++P+LIDVQ+T P  + F FGI E  +  +KI+Q ++S S+ + 
Sbjct: 65   KEWFNSNQIVNMNLSTQRPMLIDVQETYPSPVDFGFGIVEQCSEHDKILQCIMSESAEAG 124

Query: 1461 KDGLDFXXXXXXXXXXXSAIEMRLRSLGVHGDGRYLYEVGDDESQPSV---VYPSDYYMQ 1291
              G+                      + +  D   L   G DE Q  +   +  S +++ 
Sbjct: 125  IGGVH---------------------ISLLSDLMGLQLPGIDEPQKPLTPLIPKSKFFIP 163

Query: 1290 KPLLEPMADSALFSKIRVHPDGRALFTGTEIEMKDFISVFAEFYPSKKSVEWRKQSLLVP 1111
            K LL+   DSA  SKI VHPDG+  F GT IEMKD +SV A+ Y  +K     KQS+LVP
Sbjct: 164  KLLLDIFQDSAFSSKITVHPDGQVTFMGTAIEMKDLLSVVADSYLLRKG---EKQSMLVP 220

Query: 1110 HFTRLE-TEPHMNIHGSSLTMETTTFPPLKSPETVKLXXXXXXXXXXKAGREKDLCRRSS 934
            HF+R+   E  +    S+L + +T   PLKSPE VK+             RE+DL +++ 
Sbjct: 221  HFSRMSINEVEVTSLSSTLDIHSTLTVPLKSPEKVKVKPSQKKNKK--VARERDLFKKNY 278

Query: 933  FHAFECLLSLILDKRRG-KEALLSVKQSGSELPPLLTQFSAGIAGTGLAVIFSVVLNVS- 760
             HA E LLSL++DKRR  K A+LS+K+SG ELP LLTQFSAGIAGTGLAV+ SV+  ++ 
Sbjct: 279  LHACESLLSLMVDKRRQRKTAILSLKKSGPELPELLTQFSAGIAGTGLAVLLSVICKLAC 338

Query: 759  SRKAPFCAPTMLNTGFGFGLVWLSWGVNKLRDTIAHISKSSSKPGFNEKDMMRNVDRSVN 580
             R   FCA  +LNTGFGFGLVWLSW VNKLRDTI  ++K++ K G  +++M++ VD+S+ 
Sbjct: 339  GRGVSFCAYKLLNTGFGFGLVWLSWAVNKLRDTIVSMNKNTGKLGLKDEEMIQKVDKSLR 398

Query: 579  DIFLRAATIMAIAVLRFA 526
            +++ RAAT++A+AVLR A
Sbjct: 399  EVYFRAATLLAVAVLRLA 416


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