BLASTX nr result

ID: Coptis25_contig00011042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011042
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310983.1| predicted protein [Populus trichocarpa] gi|2...   100   5e-19
ref|XP_002337234.1| predicted protein [Populus trichocarpa] gi|2...    98   2e-18
ref|XP_002338144.1| predicted protein [Populus trichocarpa] gi|2...    96   7e-18
ref|XP_002278133.1| PREDICTED: uncharacterized protein LOC100244...    87   6e-15
ref|XP_003535470.1| PREDICTED: uncharacterized protein LOC100813...    81   2e-13

>ref|XP_002310983.1| predicted protein [Populus trichocarpa] gi|222850803|gb|EEE88350.1|
           predicted protein [Populus trichocarpa]
          Length = 84

 Score =  100 bits (248), Expect = 5e-19
 Identities = 46/82 (56%), Positives = 65/82 (79%)
 Frame = -1

Query: 605 MHRSASTSRASDEFFINLSPASKGSPGVKVADVDNLAAYDPIADISKKEITSHIKSSGEN 426
           MHRSAS +RASDEF I+L+PA+  SP +K      L  +DPI+D++KK++  H KS GEN
Sbjct: 1   MHRSASGTRASDEFLISLAPAADVSP-LKNTAYSELPTHDPISDVTKKDLAWHHKSMGEN 59

Query: 425 SIHIIPIVLIVCAITLWVFSHP 360
           ++H+IP+VLI+CA+TLW+FS+P
Sbjct: 60  AVHLIPVVLILCALTLWIFSYP 81


>ref|XP_002337234.1| predicted protein [Populus trichocarpa] gi|222838528|gb|EEE76893.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 47/82 (57%), Positives = 63/82 (76%)
 Frame = -1

Query: 605 MHRSASTSRASDEFFINLSPASKGSPGVKVADVDNLAAYDPIADISKKEITSHIKSSGEN 426
           MH SAS +RASDEF INL+PA+  SP +K      L  +DPI+D++KK++  H KS GEN
Sbjct: 1   MHWSASGTRASDEFLINLAPAADVSP-LKNTAYTELPTHDPISDVTKKDLAWHHKSIGEN 59

Query: 425 SIHIIPIVLIVCAITLWVFSHP 360
           ++H+IP VLI+CA+TLW+FSHP
Sbjct: 60  AVHLIPGVLILCALTLWIFSHP 81


>ref|XP_002338144.1| predicted protein [Populus trichocarpa] gi|222871048|gb|EEF08179.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 47/82 (57%), Positives = 63/82 (76%)
 Frame = -1

Query: 605 MHRSASTSRASDEFFINLSPASKGSPGVKVADVDNLAAYDPIADISKKEITSHIKSSGEN 426
           MH SAS +RASDEF I+L+PA+  SP +K      L  +DPI+D++KK++  H KS GEN
Sbjct: 1   MHWSASGTRASDEFLISLAPAADVSP-LKNTAYTELPTHDPISDVTKKDLAWHHKSIGEN 59

Query: 425 SIHIIPIVLIVCAITLWVFSHP 360
           +IH+IP VLI+CA+TLW+FSHP
Sbjct: 60  AIHLIPGVLILCALTLWIFSHP 81


>ref|XP_002278133.1| PREDICTED: uncharacterized protein LOC100244287 [Vitis vinifera]
           gi|297744976|emb|CBI38568.3| unnamed protein product
           [Vitis vinifera]
          Length = 148

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 44/103 (42%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
 Frame = -1

Query: 605 MHRSASTSRASDEFFINLSPASKGSPGVKVA-DVDNLAAYDPIADISKKEITSHIKSSGE 429
           M+RS S++R ++++ IN+   S  SPG++V+   + L  YDP+++++KKE  S IK + E
Sbjct: 1   MYRSLSSTRVAEDYNINVGSPSSKSPGLRVSVSNEELPVYDPVSEMAKKE-RSRIKFA-E 58

Query: 428 NSIHIIPIVLIVCAITLWVFSHPVVDLTKTADVAAVKVEGANI 300
           N++H+IP VL++CAI LWVFS+P VD+  T D  A ++ G  +
Sbjct: 59  NAVHVIPFVLLLCAIILWVFSNPDVDVGITNDSIAARIRGLTL 101


>ref|XP_003535470.1| PREDICTED: uncharacterized protein LOC100813926 [Glycine max]
          Length = 142

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 10/148 (6%)
 Frame = -1

Query: 605 MHRSASTSRASDEFFINL---SPASKGSPGVKVADVDNLAAYDPIADISKKEITSHIKSS 435
           MHRSAS +R SD++F +    SP+S       + D +NL  YDPIA+++K+E  + +K +
Sbjct: 1   MHRSASWNRFSDDYFKHATTSSPSSGHRSSYSMFDGNNLPTYDPIAELAKRE-RARVKFA 59

Query: 434 GENSIHIIPIVLIVCAITLWVFSHPVVDLTKTADVAAVKVEGANIH------NHGNKTGL 273
            EN++H+IP+VLI+CAI LW+FS+P  D+    D    ++EG ++       + G + G 
Sbjct: 60  -ENAVHVIPLVLIICAIILWLFSNP--DVGIIGDPIGARIEGLSLEGEIENDSDGTQMGF 116

Query: 272 SSTVNLKNLDQQE-GTGKGKTDKFLEKN 192
              V  + +   E G  K   D  + KN
Sbjct: 117 LPIVTSEEISTTEIGADK---DSIIPKN 141


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