BLASTX nr result

ID: Coptis25_contig00011026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011026
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine...    89   3e-16
ref|XP_004170204.1| PREDICTED: probable LRR receptor-like serine...    89   4e-16
ref|XP_004138567.1| PREDICTED: probable LRR receptor-like serine...    89   4e-16
ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine...    88   8e-16
ref|XP_004160745.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR...    87   2e-15

>ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like, partial [Vitis vinifera]
          Length = 965

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
 Frame = -1

Query: 286 LEELPFLKYLNLSFNNFEGEVPMKGVFQNVSAFSVVGNDNICGGIPALDLLKCQIQQTKK 107
           L+++ F + +NLS+N+FEG +P +GVF+NVSA S++GN  +CGGIP   L KC +Q+ KK
Sbjct: 517 LQDIHF-QLVNLSYNDFEGILPTEGVFKNVSATSIMGNSKLCGGIPEFQLPKCNLQEPKK 575

Query: 106 QGLPLALKVTIGLVIPLFGIA---SFLFVVYWRKR 11
           +GL LALK+ I  V  L  I    SFL  ++ RK+
Sbjct: 576 RGLSLALKIIIATVSGLLAITCVLSFLIFLWLRKK 610


>ref|XP_004170204.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Cucumis sativus]
          Length = 751

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
 Frame = -1

Query: 283 EELPFLKYLNLSFNNFEGEVPMKGVFQNVSAFSVVGNDNICGGIPALDLLKCQIQQTKKQ 104
           ++  FL YLNLSFNN EGEVP +GV +N +AFS++GN  +CGGI  L+L +C  Q   KQ
Sbjct: 589 QDFNFLNYLNLSFNNLEGEVPTQGVLKNATAFSIIGNKKLCGGIHELNLSRCSFQSPTKQ 648

Query: 103 GLPLALKVTIGLVIPLFGIASFLFVV--YWRKRHK 5
              + +K+ + +V  L G     FVV  +W ++ K
Sbjct: 649 KPTMTVKIIVSVVGGLVGSVLVFFVVLFFWSRKRK 683


>ref|XP_004138567.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Cucumis sativus]
          Length = 751

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
 Frame = -1

Query: 283 EELPFLKYLNLSFNNFEGEVPMKGVFQNVSAFSVVGNDNICGGIPALDLLKCQIQQTKKQ 104
           ++  FL YLNLSFNN EGEVP +GV +N +AFS++GN  +CGGI  L+L +C  Q   KQ
Sbjct: 589 QDFNFLNYLNLSFNNLEGEVPTQGVLKNATAFSIIGNKKLCGGIHELNLSRCSFQSPTKQ 648

Query: 103 GLPLALKVTIGLVIPLFGIASFLFVV--YWRKRHK 5
              + +K+ + +V  L G     FVV  +W ++ K
Sbjct: 649 KPTMTVKIIVSVVGGLVGSVLVFFVVLFFWSRKRK 683


>ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Cucumis sativus]
          Length = 1023

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
 Frame = -1

Query: 292 TDLEELPFLKYLNLSFNNFEGEVPMKGVFQNVSAFSVVGNDNICGGIPALDLLKCQIQQT 113
           T L+E   L YLNLSFNN EGEVP +GVF+N +AFS++GN  +C GI  L+L +C++   
Sbjct: 586 TYLQEFEVLSYLNLSFNNLEGEVPTQGVFKNTTAFSILGNKKLCNGINELNLPRCRLDYP 645

Query: 112 KKQGLPLALKVTIGLVIPLFGIASFL--FVVYWRKRHK 5
           +KQ L   LK+ I +V  L G    +   + +W ++ K
Sbjct: 646 RKQKLTTKLKIIISVVSGLVGALLIICCLLFFWSRKKK 683


>ref|XP_004160745.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like
           serine/threonine-protein kinase At3g47570-like [Cucumis
           sativus]
          Length = 1023

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 4/100 (4%)
 Frame = -1

Query: 292 TDLEELPFLKYLNLSFNNFEGEVPMKGVFQNVSAFSVVGNDNICGGIPALDLLKCQIQQT 113
           T L+E   L YLNLSFNN EGEVP +GVF+N +AFS++GN  +C GI  L+L +C++   
Sbjct: 586 TYLQEFEVLSYLNLSFNNLEGEVPTQGVFKNTTAFSILGNKKLCNGINELNLPRCRLDYP 645

Query: 112 KKQGLPLALKVTIGLVIPLFG----IASFLFVVYWRKRHK 5
           +KQ L   LK+ I +V  L G    I   LF +   +++K
Sbjct: 646 RKQKLTTKLKIIISVVSGLVGALLIICCLLFXLVKEEKNK 685


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