BLASTX nr result

ID: Coptis25_contig00011017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011017
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322249.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_002303776.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002282624.1| PREDICTED: uncharacterized protein LOC100260...   111   5e-23
ref|XP_003542444.1| PREDICTED: cyclin-D-binding Myb-like transcr...   109   3e-22
ref|XP_004155800.1| PREDICTED: cyclin-D-binding Myb-like transcr...   107   1e-21

>ref|XP_002322249.1| predicted protein [Populus trichocarpa] gi|222869245|gb|EEF06376.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/81 (67%), Positives = 63/81 (77%)
 Frame = -1

Query: 326 DDIRLLDELLTKDFSSLEEVDWDSLLDHRPGDMCRKRWCRMVNHLGEHRNKSFADQVDVL 147
           DD RLL EL   D   +E+VDWD+LL+HR GD+CRKRW +MV HLG+HRNKSFADQVDVL
Sbjct: 457 DDYRLLMELYDLDACCMEDVDWDNLLEHRSGDLCRKRWNQMVKHLGDHRNKSFADQVDVL 516

Query: 146 SKRYCVDVLEARAAYEERTPV 84
            KRYC DVLEAR AY  +  V
Sbjct: 517 IKRYCPDVLEAREAYNSKPAV 537


>ref|XP_002303776.1| predicted protein [Populus trichocarpa] gi|222841208|gb|EEE78755.1|
           predicted protein [Populus trichocarpa]
          Length = 697

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/81 (65%), Positives = 62/81 (76%)
 Frame = -1

Query: 326 DDIRLLDELLTKDFSSLEEVDWDSLLDHRPGDMCRKRWCRMVNHLGEHRNKSFADQVDVL 147
           DD RLL EL   D   +E+VDWD+LL+HR G++CRKRW +MV HLG+HRNKSFADQVDVL
Sbjct: 616 DDYRLLMELYDLDACCMEDVDWDNLLEHRSGELCRKRWNQMVKHLGDHRNKSFADQVDVL 675

Query: 146 SKRYCVDVLEARAAYEERTPV 84
             RYC DVLEAR AY  +  V
Sbjct: 676 INRYCHDVLEAREAYNSKPAV 696


>ref|XP_002282624.1| PREDICTED: uncharacterized protein LOC100260316 [Vitis vinifera]
          Length = 686

 Score =  111 bits (278), Expect = 5e-23
 Identities = 47/81 (58%), Positives = 65/81 (80%)
 Frame = -1

Query: 326 DDIRLLDELLTKDFSSLEEVDWDSLLDHRPGDMCRKRWCRMVNHLGEHRNKSFADQVDVL 147
           DD RLL+ L   D   +E+VDWD+LLDHR G++CRKRW +M+ H+G ++NKSFA+QV++L
Sbjct: 605 DDYRLLNALFNLDACCMEDVDWDNLLDHRSGELCRKRWNQMIRHIGHYKNKSFAEQVELL 664

Query: 146 SKRYCVDVLEARAAYEERTPV 84
           S+RYC D+LEAR AY+ + PV
Sbjct: 665 SQRYCPDLLEAREAYDAKVPV 685


>ref|XP_003542444.1| PREDICTED: cyclin-D-binding Myb-like transcription factor 1-like
           [Glycine max]
          Length = 326

 Score =  109 bits (272), Expect = 3e-22
 Identities = 46/78 (58%), Positives = 64/78 (82%)
 Frame = -1

Query: 326 DDIRLLDELLTKDFSSLEEVDWDSLLDHRPGDMCRKRWCRMVNHLGEHRNKSFADQVDVL 147
           DD RL++ L T D   +EEVDWD+LL+HRPGD+CRKRW +MV ++GEH  KSFA+QV++L
Sbjct: 245 DDYRLVNALFTLDACCMEEVDWDNLLEHRPGDVCRKRWNQMVQYIGEHGGKSFAEQVEIL 304

Query: 146 SKRYCVDVLEARAAYEER 93
           +KR+C D+LE R A++E+
Sbjct: 305 AKRFCPDLLEVREAFDEK 322


>ref|XP_004155800.1| PREDICTED: cyclin-D-binding Myb-like transcription factor 1-like
           [Cucumis sativus]
          Length = 530

 Score =  107 bits (266), Expect = 1e-21
 Identities = 46/82 (56%), Positives = 65/82 (79%)
 Frame = -1

Query: 326 DDIRLLDELLTKDFSSLEEVDWDSLLDHRPGDMCRKRWCRMVNHLGEHRNKSFADQVDVL 147
           DD RL+D L + D  S+E+V+WD LL+HR GD+CRKRW +MV H+G++ NKSF++QV++L
Sbjct: 449 DDYRLVDALSSLDACSIEDVEWDQLLEHRDGDVCRKRWSQMVKHIGDNGNKSFSEQVEIL 508

Query: 146 SKRYCVDVLEARAAYEERTPVD 81
           S+RY +DVL+AR AY+    VD
Sbjct: 509 SQRYSIDVLDAREAYDNAPVVD 530


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