BLASTX nr result

ID: Coptis25_contig00011005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011005
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269875.2| PREDICTED: endoglucanase 9-like [Vitis vinif...    93   3e-17
emb|CAN63305.1| hypothetical protein VITISV_003341 [Vitis vinifera]    93   3e-17
gb|AAQ55294.1| endo-1,4-beta-glucanase [Malus x domestica]             89   5e-16
gb|AAB65156.1| basic cellulase [Citrus sinensis]                       88   8e-16
ref|XP_002890540.1| glycosyl hydrolase family 9 protein [Arabido...    87   2e-15

>ref|XP_002269875.2| PREDICTED: endoglucanase 9-like [Vitis vinifera]
           gi|297734804|emb|CBI17038.3| unnamed protein product
           [Vitis vinifera]
          Length = 494

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/71 (69%), Positives = 51/71 (71%)
 Frame = -2

Query: 289 SDVAGETXXXXXXASMVFRKVDPXXXXXXXXXXXKVMQFALQYRGAYSDSLGSAVCPFYC 110
           SDVAGET      ASMVFRKVDP           KVMQFA+QYRGAYSDSLGSAVCPFYC
Sbjct: 177 SDVAGETAAALAAASMVFRKVDPKYSRLLLATAKKVMQFAMQYRGAYSDSLGSAVCPFYC 236

Query: 109 SYSGYKVRSLY 77
           SYSGYK   L+
Sbjct: 237 SYSGYKDELLW 247


>emb|CAN63305.1| hypothetical protein VITISV_003341 [Vitis vinifera]
          Length = 348

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/71 (69%), Positives = 51/71 (71%)
 Frame = -2

Query: 289 SDVAGETXXXXXXASMVFRKVDPXXXXXXXXXXXKVMQFALQYRGAYSDSLGSAVCPFYC 110
           SDVAGET      ASMVFRKVDP           KVMQFA+QYRGAYSDSLGSAVCPFYC
Sbjct: 46  SDVAGETAAALAAASMVFRKVDPKYSRLLLATAKKVMQFAMQYRGAYSDSLGSAVCPFYC 105

Query: 109 SYSGYKVRSLY 77
           SYSGYK   L+
Sbjct: 106 SYSGYKDELLW 116


>gb|AAQ55294.1| endo-1,4-beta-glucanase [Malus x domestica]
          Length = 497

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/71 (63%), Positives = 49/71 (69%)
 Frame = -2

Query: 289 SDVAGETXXXXXXASMVFRKVDPXXXXXXXXXXXKVMQFALQYRGAYSDSLGSAVCPFYC 110
           SDVAGET      AS+VFR+VDP            VMQFA+QYRGAYSDSLGSAVCPFYC
Sbjct: 180 SDVAGETAAALAAASLVFRRVDPKYSKLLLNTARNVMQFAIQYRGAYSDSLGSAVCPFYC 239

Query: 109 SYSGYKVRSLY 77
           SYSGY    L+
Sbjct: 240 SYSGYNDELLW 250


>gb|AAB65156.1| basic cellulase [Citrus sinensis]
          Length = 488

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/71 (63%), Positives = 49/71 (69%)
 Frame = -2

Query: 289 SDVAGETXXXXXXASMVFRKVDPXXXXXXXXXXXKVMQFALQYRGAYSDSLGSAVCPFYC 110
           SDVAGET      AS+VFRK DP            V+QFA+QYRGAYSDSLGSAVCPFYC
Sbjct: 171 SDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYC 230

Query: 109 SYSGYKVRSLY 77
           SYSGYK   L+
Sbjct: 231 SYSGYKDELLW 241


>ref|XP_002890540.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297336382|gb|EFH66799.1| glycosyl hydrolase
           family 9 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/66 (66%), Positives = 47/66 (71%)
 Frame = -2

Query: 289 SDVAGETXXXXXXASMVFRKVDPXXXXXXXXXXXKVMQFALQYRGAYSDSLGSAVCPFYC 110
           SDVA ET      +SMVFRKVDP           KVMQFA+QYRGAYSDSL S+VCPFYC
Sbjct: 169 SDVAAETAAALAASSMVFRKVDPKYSRLLLATAKKVMQFAIQYRGAYSDSLSSSVCPFYC 228

Query: 109 SYSGYK 92
           SYSGYK
Sbjct: 229 SYSGYK 234


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