BLASTX nr result

ID: Coptis25_contig00011003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011003
         (1289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284446.2| PREDICTED: prolyl-tRNA synthetase associated...   363   7e-98
ref|XP_003526618.1| PREDICTED: uncharacterized protein LOC100817...   356   8e-96
ref|XP_003544677.1| PREDICTED: prolyl-tRNA synthetase associated...   355   1e-95
ref|XP_002513786.1| conserved hypothetical protein [Ricinus comm...   340   4e-91
ref|XP_003601067.1| hypothetical protein MTR_3g072620 [Medicago ...   339   1e-90

>ref|XP_002284446.2| PREDICTED: prolyl-tRNA synthetase associated domain-containing
            protein 1-like [Vitis vinifera]
            gi|302141840|emb|CBI19043.3| unnamed protein product
            [Vitis vinifera]
          Length = 320

 Score =  363 bits (931), Expect = 7e-98
 Identities = 187/313 (59%), Positives = 238/313 (76%), Gaps = 14/313 (4%)
 Frame = +2

Query: 197  GYSKDQLLTCLKEIGIEYTRYDHPVVLTVEEQAKYIGHLKGGISKNLLLKDKKHRYYLVS 376
            G+SKDQLL  L+E+ I++T+Y+HP VLTVE Q KY+GHL GG+SKNL LKDKKHR+Y+VS
Sbjct: 2    GHSKDQLLARLQELQIDFTKYEHPAVLTVEAQEKYVGHLGGGLSKNLFLKDKKHRFYIVS 61

Query: 377  ALASTNVDLKVLSQRLGVGKSGLRKAPQEALQDILQVPLGCVTPFALINDSARNVSLLLD 556
            AL  T VDLKVLSQRLG+GK GLR AP+EAL +ILQV LGCVTPFAL+N+SAR+VSL LD
Sbjct: 62   ALKDTKVDLKVLSQRLGLGKGGLRMAPEEALGEILQVSLGCVTPFALVNESARHVSLFLD 121

Query: 557  QGFKAQECCFFHPLSNDVTISLKASDLDKFLVSIDKDPSYVDLEANVVIGKDQPPDLAAH 736
            QGFK ++ CFFHPLSND++I++KA DLDKFL SI KDPSYVDLEAN  +GKDQPPDLA  
Sbjct: 122  QGFKTKDFCFFHPLSNDMSIAIKACDLDKFLKSIGKDPSYVDLEANPTVGKDQPPDLAGL 181

Query: 737  VPSSA-----SPENSLSEEPTTENHVPVASNPKIINAKAAKQSTPAQRQDSQESSMNVRK 901
            VPS A      PE S+S  P TE H  V +   +  AK  K S   Q+   ++  ++V +
Sbjct: 182  VPSDAIVLQDPPEKSVSSGP-TEKHASVDNKSSVAAAKTVKPSNNVQKV-KEKPPISVHQ 239

Query: 902  L---------VDRLTDKISSLVLSEITSDSIKQHGEQLGVVVADNIQKKLNVDLESLIMM 1054
            L         V+ + DK S++VLSEIT D+IKQHGE LG V++D+I+K+L++DL++L ++
Sbjct: 240  LSSFTDPGHFVEEILDKTSAIVLSEITEDAIKQHGEHLGAVLSDSIRKRLSLDLKNLAII 299

Query: 1055 LKNTAYAEGYHSA 1093
             KNTAY EG+H+A
Sbjct: 300  YKNTAYTEGFHAA 312


>ref|XP_003526618.1| PREDICTED: uncharacterized protein LOC100817904 [Glycine max]
          Length = 322

 Score =  356 bits (913), Expect = 8e-96
 Identities = 181/312 (58%), Positives = 232/312 (74%), Gaps = 14/312 (4%)
 Frame = +2

Query: 197  GYSKDQLLTCLKEIGIEYTRYDHPVVLTVEEQAKYIGHLKGGISKNLLLKDKKHRYYLVS 376
            G+SK+QLL  LKE+ + +++Y+HPVVLTV+ QA+Y+GHL GG+SKNL LKDKK R Y+VS
Sbjct: 2    GFSKEQLLARLKELQVPFSQYEHPVVLTVDAQAQYVGHLGGGLSKNLFLKDKKSRLYIVS 61

Query: 377  ALASTNVDLKVLSQRLGVGKSGLRKAPQEALQDILQVPLGCVTPFALINDSARNVSLLLD 556
            ALA T VDLKVLSQRLG+GK GLR AP+EAL ++LQVPLGCVTPFAL+N+SAR+VSLLLD
Sbjct: 62   ALAGTKVDLKVLSQRLGLGKGGLRMAPEEALGEVLQVPLGCVTPFALVNESARDVSLLLD 121

Query: 557  QGFKAQECCFFHPLSNDVTISLKASDLDKFLVSIDKDPSYVDLEANVVIGKDQPPDLAAH 736
            QGFK+Q+ CFFHPLSND++ISL A DLDKFL SI ++PSYVDLE N  +GKDQPPDLAA 
Sbjct: 122  QGFKSQKHCFFHPLSNDMSISLNACDLDKFLKSIGRNPSYVDLETNPTVGKDQPPDLAAL 181

Query: 737  VPSSA------SPENSLSEEPTTENHVPVASNPKIINAKAAKQS--------TPAQRQDS 874
            VPS +        + S S+ P   NHV V +    ++AK  K S        TPA+  +S
Sbjct: 182  VPSGSIVLPDQPQKQSSSQVPKDANHVSVDNGANTVSAKVVKPSSGGKNTKGTPAKNVNS 241

Query: 875  QESSMNVRKLVDRLTDKISSLVLSEITSDSIKQHGEQLGVVVADNIQKKLNVDLESLIMM 1054
              S  +  + V+ +  K S L+LSE+  ++IK HGEQLG V++D +QK LN + +SL M+
Sbjct: 242  SGSFADAGQFVEEILQKTSQLLLSEVKDENIKLHGEQLGTVLSDKLQKNLNAEFKSLAMI 301

Query: 1055 LKNTAYAEGYHS 1090
             KNTAY EG+H+
Sbjct: 302  FKNTAYTEGFHA 313


>ref|XP_003544677.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
            protein 1-like [Glycine max]
          Length = 320

 Score =  355 bits (912), Expect = 1e-95
 Identities = 187/311 (60%), Positives = 229/311 (73%), Gaps = 13/311 (4%)
 Frame = +2

Query: 197  GYSKDQLLTCLKEIGIEYTRYDHPVVLTVEEQAKYIGHLKGGISKNLLLKDKKHRYYLVS 376
            G+SK+QLL  LKE+ I +++Y+HP +LTVEE  KY+GHL GG+SKNL LKDKK R+YLVS
Sbjct: 2    GFSKEQLLARLKELLINFSQYEHPAILTVEEGEKYVGHLGGGVSKNLFLKDKKQRFYLVS 61

Query: 377  ALASTNVDLKVLSQRLGVGKSGLRKAPQEALQDILQVPLGCVTPFALINDSARNVSLLLD 556
            AL  T VD+KVLSQRLG+GK GLR  P EAL +ILQV LGCVTPFA++N+SAR+VSLLLD
Sbjct: 62   ALKDTKVDIKVLSQRLGLGKGGLRMVPSEALGEILQVSLGCVTPFAVVNESARDVSLLLD 121

Query: 557  QGFKAQECCFFHPLSNDVTISLKASDLDKFLVSIDKDPSYVDLEANVVIGKDQPPDLAAH 736
            QGFK QE CFFHPLSND+TIS+ ++DLDKFL SI +DPSYVD EAN  +GKDQPPDLAA 
Sbjct: 122  QGFKTQEFCFFHPLSNDMTISINSNDLDKFLKSIGRDPSYVDFEANPPVGKDQPPDLAAL 181

Query: 737  VPSSA-----SPENSLSEEPTTENHVPVASNPKIINAKAAK-----QSTPAQRQDSQESS 886
            VPS        PE   S +PT  NHV V   PKII+AK  K     ++T  +  +   SS
Sbjct: 182  VPSGTINLPDQPEKQPSSQPTEGNHVSV-DEPKIISAKVVKSCVSGKNTKEKAVNKAHSS 240

Query: 887  MN---VRKLVDRLTDKISSLVLSEITSDSIKQHGEQLGVVVADNIQKKLNVDLESLIMML 1057
             N   V   V+ +  K S L+LSEI  D+I QHGE LG VV+DN++K L+ DLE+L M+ 
Sbjct: 241  GNFADVELFVEEILHKTSRLLLSEIKEDTITQHGENLGTVVSDNLRKGLSSDLENLTMIF 300

Query: 1058 KNTAYAEGYHS 1090
            KNTAY EG+H+
Sbjct: 301  KNTAYTEGFHA 311


>ref|XP_002513786.1| conserved hypothetical protein [Ricinus communis]
            gi|223546872|gb|EEF48369.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 321

 Score =  340 bits (873), Expect = 4e-91
 Identities = 181/314 (57%), Positives = 235/314 (74%), Gaps = 16/314 (5%)
 Frame = +2

Query: 197  GYSKDQLLTCLKEIGIEYTRYDHPVVLTVEEQAKYIGHLKGGISKNLLLKDKKHRYYLVS 376
            GY KDQLL  LKE+ I++ +Y+HP VLTVEEQAKY+G   GG+SKNL LKDKK R+Y+VS
Sbjct: 2    GYGKDQLLARLKELQIDFVQYEHPTVLTVEEQAKYVGDKGGGLSKNLFLKDKKSRFYIVS 61

Query: 377  ALASTNVDLKVLSQRLGVGKSGLRKAPQEALQDILQVPLGCVTPFALINDSARNVSLLLD 556
            AL  T VD+KVLSQRLG+GK G+R AP+EAL +ILQVPLGCVTPFA++N+SAR+VSLLLD
Sbjct: 62   ALEDTKVDMKVLSQRLGLGKGGIRMAPEEALAEILQVPLGCVTPFAVMNESARHVSLLLD 121

Query: 557  QGFKAQECCFFHPLSNDVTISLKASDLDKFLVSIDKDPSYVDLEANVVIGKDQPPDLAAH 736
            +GF AQE CFFHPLSN+++ISL A DLDKFL SI ++PSYVDLEAN  +GKDQPPDLA  
Sbjct: 122  KGFIAQEYCFFHPLSNNMSISLHARDLDKFLKSIGREPSYVDLEANPPVGKDQPPDLAIF 181

Query: 737  VPSSASPENSLSEEPTTE------NHVPVASNPKIINAKAAKQSTPAQRQDSQ-ESSMNV 895
            VPS ++    LS+ P  E      N  P++++ K I A       P+  ++ Q ES++  
Sbjct: 182  VPSDST---ILSDPPQKEAPLQGHNKNPISADKKSIAAAVKTTKLPSTVKNVQGESAVPA 238

Query: 896  RK---------LVDRLTDKISSLVLSEITSDSIKQHGEQLGVVVADNIQKKLNVDLESLI 1048
             +         LV+ + +K S+L+LSEI  DSIK+HGE LG VVAD+I+K+L+ DL+SL 
Sbjct: 239  HQRSVFSDADLLVEEILNKTSALLLSEIKEDSIKEHGEHLGTVVADSIRKRLSSDLKSLA 298

Query: 1049 MMLKNTAYAEGYHS 1090
            +M KNTAYA+G+++
Sbjct: 299  IMFKNTAYAQGFYA 312


>ref|XP_003601067.1| hypothetical protein MTR_3g072620 [Medicago truncatula]
            gi|355490115|gb|AES71318.1| hypothetical protein
            MTR_3g072620 [Medicago truncatula]
          Length = 378

 Score =  339 bits (869), Expect = 1e-90
 Identities = 183/314 (58%), Positives = 226/314 (71%), Gaps = 18/314 (5%)
 Frame = +2

Query: 197  GYSKDQLLTCLKEIGIEYTRYDHPVVLTVEEQAKYIGHLKGGISKNLLLKDKKHRYYLVS 376
            G SK+QLL  L+E+ IE+++Y+HPVVLTVE QAKY+G   GG+SKNL LKDKK+R+Y+VS
Sbjct: 51   GLSKEQLLHQLQELQIEFSKYEHPVVLTVEAQAKYVG--SGGLSKNLFLKDKKNRFYIVS 108

Query: 377  ALASTNVDLKVLSQRLGVGKSGLRKAPQEALQDILQVPLGCVTPFALINDSARNVSLLLD 556
            ALA T VDLKVLSQRLG+GK GLR AP+EAL ++LQVPLGCVTPFA++N+SAR+VSLLLD
Sbjct: 109  ALAETKVDLKVLSQRLGLGKGGLRMAPEEALGELLQVPLGCVTPFAVVNESARDVSLLLD 168

Query: 557  QGFKAQECCFFHPLSNDVTISLKASDLDKFLVSIDKDPSYVDLEANVVIGKDQPPDLAAH 736
            QGFK QE CFFHPLSND++ISL    LDKFL SI +DPSYVDLEAN  +GKDQPPDLAA 
Sbjct: 169  QGFKTQEHCFFHPLSNDMSISLNVRGLDKFLKSIGRDPSYVDLEANPAVGKDQPPDLAAL 228

Query: 737  VPSSA------SPENSLSEEPTTENHVPVA----SNPKIINAKAAKQS--------TPAQ 862
            VPSS+        + S +E P  EN V VA    +  K + AK  K S        TP +
Sbjct: 229  VPSSSIILPDQPGKQSSTEVPKNENLVSVAVSVDTKTKTVPAKVVKPSVAGNNSKGTPEK 288

Query: 863  RQDSQESSMNVRKLVDRLTDKISSLVLSEITSDSIKQHGEQLGVVVADNIQKKLNVDLES 1042
                  S  +  KLV+ +  K S ++LSEI  ++IK HGEQLG  ++D +QK L  DL++
Sbjct: 289  TVQPSGSFADAGKLVEEILHKTSKILLSEINEETIKMHGEQLGTALSDKLQKNLTSDLKN 348

Query: 1043 LIMMLKNTAYAEGY 1084
            L M  KNTAY EG+
Sbjct: 349  LAMTFKNTAYTEGF 362


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