BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010997
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002462526.1| hypothetical protein SORBIDRAFT_02g027390 [S...    85   2e-14
ref|XP_002527312.1| pentatricopeptide repeat-containing protein,...    80   5e-13
tpg|DAA61902.1| TPA: hypothetical protein ZEAMMB73_242754 [Zea m...    79   1e-12
emb|CBI18867.3| unnamed protein product [Vitis vinifera]               77   3e-12
ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12

>ref|XP_002462526.1| hypothetical protein SORBIDRAFT_02g027390 [Sorghum bicolor]
           gi|241925903|gb|EER99047.1| hypothetical protein
           SORBIDRAFT_02g027390 [Sorghum bicolor]
          Length = 769

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 49/119 (41%), Positives = 70/119 (58%)
 Frame = +3

Query: 6   VLSMRMISEEQSVLQKNRKYFEDNFVLAEDSEAELRIIKIFKDSISTKHYKKEIFEDCGD 185
           VLSMRMISE+ S+L + R  FED  +L+E+ +AELRII+ F+                 +
Sbjct: 659 VLSMRMISEDVSILSEKRIVFED-LILSEEPDAELRIIRAFQAG--------------EE 703

Query: 186 YLATALLYLRWCALAGMSISWSPDEGIWAMSQKNQLETLEKNKKKEMKSTEQCKGKRRN 362
           + ATALL LRWCA  G +ISWSP+E +WA   +    + + NK+  +  ++  K  RRN
Sbjct: 704 FFATALLNLRWCATMGATISWSPEESLWA---RRLASSYDANKRPHINPSDVPKSWRRN 759


>ref|XP_002527312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533312|gb|EEF35064.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 802

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 45/109 (41%), Positives = 63/109 (57%)
 Frame = +3

Query: 3   QVLSMRMISEEQSVLQKNRKYFEDNFVLAEDSEAELRIIKIFKDSISTKHYKKEIFEDCG 182
           QVLS+ MI EE+  LQ+ R   E++F+ +ED EAE RI+              E F  C 
Sbjct: 704 QVLSLWMIEEEEDSLQQKRAELEEDFIYSEDQEAESRIL--------------EYFVGCR 749

Query: 183 DYLATALLYLRWCALAGMSISWSPDEGIWAMSQKNQLETLEKNKKKEMK 329
           + +A +LL LRWCA+ G  ISWSP+E +WA     +L T    +K+E+K
Sbjct: 750 ENIAVSLLNLRWCAILGYPISWSPNETLWA----RRLSTNYCTRKEELK 794


>tpg|DAA61902.1| TPA: hypothetical protein ZEAMMB73_242754 [Zea mays]
          Length = 442

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 46/119 (38%), Positives = 67/119 (56%)
 Frame = +3

Query: 6   VLSMRMISEEQSVLQKNRKYFEDNFVLAEDSEAELRIIKIFKDSISTKHYKKEIFEDCGD 185
           VLSMRMISE+  +  + R  FED  +L+E+ +AE RII+ F+                 +
Sbjct: 331 VLSMRMISEDAGIPSEKRIVFED-LILSEEPDAEFRIIRAFQAG--------------EE 375

Query: 186 YLATALLYLRWCALAGMSISWSPDEGIWAMSQKNQLETLEKNKKKEMKSTEQCKGKRRN 362
           +LATALL LRWCA  G ++SWSP+E +WAM       + + NK+  +  ++  K   RN
Sbjct: 376 FLATALLNLRWCATMGATVSWSPEESLWAM---RLAASYDANKRPHINPSDAPKSWGRN 431


>emb|CBI18867.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 42/90 (46%), Positives = 57/90 (63%)
 Frame = +3

Query: 3   QVLSMRMISEEQSVLQKNRKYFEDNFVLAEDSEAELRIIKIFKDSISTKHYKKEIFEDCG 182
           QVLSMRMISE+ S L++ R   ED F+ +ED +AE +I++ FK S               
Sbjct: 716 QVLSMRMISEDNSTLEEKRTELED-FIHSEDKDAESQILQFFKGS--------------D 760

Query: 183 DYLATALLYLRWCALAGMSISWSPDEGIWA 272
           + LA ALL LRWCA++G  ISW+P+E +WA
Sbjct: 761 ENLAIALLNLRWCAISGSPISWTPNESLWA 790


>ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g76280-like [Vitis vinifera]
          Length = 728

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 42/90 (46%), Positives = 57/90 (63%)
 Frame = +3

Query: 3   QVLSMRMISEEQSVLQKNRKYFEDNFVLAEDSEAELRIIKIFKDSISTKHYKKEIFEDCG 182
           QVLSMRMISE+ S L++ R   ED F+ +ED +AE +I++ FK S               
Sbjct: 640 QVLSMRMISEDNSTLEEKRTELED-FIHSEDKDAESQILQFFKGS--------------D 684

Query: 183 DYLATALLYLRWCALAGMSISWSPDEGIWA 272
           + LA ALL LRWCA++G  ISW+P+E +WA
Sbjct: 685 ENLAIALLNLRWCAISGSPISWTPNESLWA 714