BLASTX nr result

ID: Coptis25_contig00010972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010972
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|2...   323   2e-86
ref|XP_002525637.1| ATP-binding cassette transporter, putative [...   310   9e-83
gb|AAC31858.1| putative ABC transporter [Arabidopsis thaliana]        310   1e-82
ref|NP_180555.2| ABC transporter G family member 31 [Arabidopsis...   310   1e-82
ref|XP_002279155.1| PREDICTED: ABC transporter G family member 3...   308   4e-82

>ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|222847070|gb|EEE84617.1|
           predicted protein [Populus trichocarpa]
          Length = 1432

 Score =  323 bits (827), Expect = 2e-86
 Identities = 157/195 (80%), Positives = 174/195 (89%)
 Frame = -1

Query: 586 QGASDGFAGYLKDLVRLEKEKNIRPNPEIDAFMKASSVGGTTHSLATDYILKVLGLDVCA 407
           QGAS+GF GY++DLVRLEKE+N+RPNPE+DAFMKASSVGG  HS++TDY+LKVLGLDVC+
Sbjct: 260 QGASEGFGGYMEDLVRLEKERNVRPNPEVDAFMKASSVGGKKHSISTDYVLKVLGLDVCS 319

Query: 406 ETIVGNDMLRGVSGGQRKRVTTGEVIVGPRKTLFMDEISTGLDSSTTYQIVKCTRNFVHL 227
           ET+VGNDMLRGVSGGQRKRVTTGE+IVGPRKTLFMDEISTGLDSSTTYQIVKC  NFVHL
Sbjct: 320 ETVVGNDMLRGVSGGQRKRVTTGEMIVGPRKTLFMDEISTGLDSSTTYQIVKCIGNFVHL 379

Query: 226 MEGTVLMALLQPAPETXXXXXXXXXXXXXXIVYQGPREQVVEFFESLGFRLPPRKGVADF 47
           ME TVLMALLQPAPET              +VYQGPR +V+EFFESLGF+LPPRKGVADF
Sbjct: 380 MEATVLMALLQPAPETFDLFDDLVLLSEGYVVYQGPRAEVLEFFESLGFKLPPRKGVADF 439

Query: 46  LQEVTSRKDQAQYWA 2
           LQEVTS+KDQAQYWA
Sbjct: 440 LQEVTSKKDQAQYWA 454


>ref|XP_002525637.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223535073|gb|EEF36755.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1433

 Score =  310 bits (795), Expect = 9e-83
 Identities = 153/194 (78%), Positives = 170/194 (87%)
 Frame = -1

Query: 586 QGASDGFAGYLKDLVRLEKEKNIRPNPEIDAFMKASSVGGTTHSLATDYILKVLGLDVCA 407
           QGAS+GFA Y+KDL+RLEKE++IRP+PEIDAFMKASSV G  HS++TDY+LKVLGLDVCA
Sbjct: 259 QGASEGFAAYMKDLIRLEKEQDIRPSPEIDAFMKASSVAGKKHSVSTDYVLKVLGLDVCA 318

Query: 406 ETIVGNDMLRGVSGGQRKRVTTGEVIVGPRKTLFMDEISTGLDSSTTYQIVKCTRNFVHL 227
           ET+VG+DMLRGVSGGQRKRVTTGE+IVGPRKTL MDEISTGLDSSTTYQIVKC  NFVH 
Sbjct: 319 ETVVGSDMLRGVSGGQRKRVTTGEMIVGPRKTLLMDEISTGLDSSTTYQIVKCIGNFVHQ 378

Query: 226 MEGTVLMALLQPAPETXXXXXXXXXXXXXXIVYQGPREQVVEFFESLGFRLPPRKGVADF 47
           M+GTVLMALLQP PET              +VYQGPR +V+EFFESLGFRLPPRKGVADF
Sbjct: 379 MDGTVLMALLQPPPETFDLFDDLVLLSEGYMVYQGPRAEVLEFFESLGFRLPPRKGVADF 438

Query: 46  LQEVTSRKDQAQYW 5
           LQEVTS+KDQAQYW
Sbjct: 439 LQEVTSKKDQAQYW 452


>gb|AAC31858.1| putative ABC transporter [Arabidopsis thaliana]
          Length = 1443

 Score =  310 bits (793), Expect = 1e-82
 Identities = 152/195 (77%), Positives = 170/195 (87%)
 Frame = -1

Query: 586 QGASDGFAGYLKDLVRLEKEKNIRPNPEIDAFMKASSVGGTTHSLATDYILKVLGLDVCA 407
           QGAS+GFAGY+KDL RLEKE+ IRP+ EIDAFMKA+SV G  HS++TDY+LKVLGLDVC+
Sbjct: 279 QGASEGFAGYMKDLTRLEKERGIRPSSEIDAFMKAASVKGEKHSVSTDYVLKVLGLDVCS 338

Query: 406 ETIVGNDMLRGVSGGQRKRVTTGEVIVGPRKTLFMDEISTGLDSSTTYQIVKCTRNFVHL 227
           +T+VGNDM+RGVSGGQRKRVTTGE+ VGPRKTLFMDEISTGLDSSTT+QIVKC RNFVHL
Sbjct: 339 DTMVGNDMMRGVSGGQRKRVTTGEMTVGPRKTLFMDEISTGLDSSTTFQIVKCIRNFVHL 398

Query: 226 MEGTVLMALLQPAPETXXXXXXXXXXXXXXIVYQGPREQVVEFFESLGFRLPPRKGVADF 47
           M+ TVLMALLQPAPET              +VYQGPRE V+ FFESLGFRLPPRKGVADF
Sbjct: 399 MDATVLMALLQPAPETFDLFDDLILLSEGYMVYQGPREDVIAFFESLGFRLPPRKGVADF 458

Query: 46  LQEVTSRKDQAQYWA 2
           LQEVTS+KDQAQYWA
Sbjct: 459 LQEVTSKKDQAQYWA 473


>ref|NP_180555.2| ABC transporter G family member 31 [Arabidopsis thaliana]
           gi|75326886|sp|Q7PC88.1|AB31G_ARATH RecName: Full=ABC
           transporter G family member 31; Short=ABC transporter
           ABCG.31; Short=AtABCG31; AltName: Full=Probable
           pleiotropic drug resistance protein 3
           gi|28144325|tpg|DAA00871.1| TPA_exp: PDR3 ABC
           transporter [Arabidopsis thaliana]
           gi|330253231|gb|AEC08325.1| ABC transporter G family
           member 31 [Arabidopsis thaliana]
          Length = 1426

 Score =  310 bits (793), Expect = 1e-82
 Identities = 152/195 (77%), Positives = 170/195 (87%)
 Frame = -1

Query: 586 QGASDGFAGYLKDLVRLEKEKNIRPNPEIDAFMKASSVGGTTHSLATDYILKVLGLDVCA 407
           QGAS+GFAGY+KDL RLEKE+ IRP+ EIDAFMKA+SV G  HS++TDY+LKVLGLDVC+
Sbjct: 262 QGASEGFAGYMKDLTRLEKERGIRPSSEIDAFMKAASVKGEKHSVSTDYVLKVLGLDVCS 321

Query: 406 ETIVGNDMLRGVSGGQRKRVTTGEVIVGPRKTLFMDEISTGLDSSTTYQIVKCTRNFVHL 227
           +T+VGNDM+RGVSGGQRKRVTTGE+ VGPRKTLFMDEISTGLDSSTT+QIVKC RNFVHL
Sbjct: 322 DTMVGNDMMRGVSGGQRKRVTTGEMTVGPRKTLFMDEISTGLDSSTTFQIVKCIRNFVHL 381

Query: 226 MEGTVLMALLQPAPETXXXXXXXXXXXXXXIVYQGPREQVVEFFESLGFRLPPRKGVADF 47
           M+ TVLMALLQPAPET              +VYQGPRE V+ FFESLGFRLPPRKGVADF
Sbjct: 382 MDATVLMALLQPAPETFDLFDDLILLSEGYMVYQGPREDVIAFFESLGFRLPPRKGVADF 441

Query: 46  LQEVTSRKDQAQYWA 2
           LQEVTS+KDQAQYWA
Sbjct: 442 LQEVTSKKDQAQYWA 456


>ref|XP_002279155.1| PREDICTED: ABC transporter G family member 31-like [Vitis vinifera]
          Length = 1415

 Score =  308 bits (789), Expect = 4e-82
 Identities = 151/195 (77%), Positives = 171/195 (87%)
 Frame = -1

Query: 586 QGASDGFAGYLKDLVRLEKEKNIRPNPEIDAFMKASSVGGTTHSLATDYILKVLGLDVCA 407
           QGA++GFAGY+ DL RLEKE++IRP+PEIDAFMKAS+ GG THS++TDY+LKVLGLDVC+
Sbjct: 254 QGANEGFAGYMTDLARLEKERDIRPSPEIDAFMKASAFGGRTHSISTDYVLKVLGLDVCS 313

Query: 406 ETIVGNDMLRGVSGGQRKRVTTGEVIVGPRKTLFMDEISTGLDSSTTYQIVKCTRNFVHL 227
           ETIVGNDMLRGVSGGQ++RVTTGE+IVGPRKTLFMDEISTGLDSSTT+QIVKC  NFVH 
Sbjct: 314 ETIVGNDMLRGVSGGQKRRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCIGNFVHQ 373

Query: 226 MEGTVLMALLQPAPETXXXXXXXXXXXXXXIVYQGPREQVVEFFESLGFRLPPRKGVADF 47
           M+ TVLMALLQPAPET              IVYQGPR +V+EFFESLGFRLPPRKGVADF
Sbjct: 374 MDSTVLMALLQPAPETFDLFDDLLLLSEGHIVYQGPRAEVLEFFESLGFRLPPRKGVADF 433

Query: 46  LQEVTSRKDQAQYWA 2
           LQEVTS+KDQ QYW+
Sbjct: 434 LQEVTSKKDQEQYWS 448


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