BLASTX nr result

ID: Coptis25_contig00010967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010967
         (1725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC23047.1| ankyrin-like protein [Solanum tuberosum]               50   1e-13
gb|AAQ63971.1| unknown [Nicotiana benthamiana]                         49   1e-13
ref|XP_002531277.1| ankyrin repeat-containing protein, putative ...    51   1e-12
ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296...    52   1e-11
ref|XP_002319644.1| predicted protein [Populus trichocarpa] gi|2...    47   2e-10

>dbj|BAC23047.1| ankyrin-like protein [Solanum tuberosum]
          Length = 467

 Score = 49.7 bits (117), Expect(3) = 1e-13
 Identities = 25/57 (43%), Positives = 39/57 (68%)
 Frame = +2

Query: 1127 KSKYDKLKEALLAGNLR*IKKLGKELADGKGVSETIANVKDSHGRGALHGAAQ*GKL 1297
            + K +K  +A  +G++   KKL K+L DGKG++ T+A+VKD + RGAL  AA+  K+
Sbjct: 12   REKVNKFLKAACSGDIELFKKLAKQLDDGKGLAGTVADVKDGNKRGALIFAARESKI 68



 Score = 45.4 bits (106), Expect(3) = 1e-13
 Identities = 22/36 (61%), Positives = 26/36 (72%)
 Frame = +1

Query: 1297 E*CKYLLEELKFDVNWKDIEGNTALHYASGNGHLST 1404
            E CKYL+EELK DVN KD EG T L +A+  GH +T
Sbjct: 69   ELCKYLVEELKVDVNEKDDEGETPLLHAAREGHTAT 104



 Score = 28.9 bits (63), Expect(3) = 1e-13
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 1494 YRIENGADLAASNTDNSTALHNAVSEG 1574
            Y IE GAD A  +   +TALH+A   G
Sbjct: 107  YLIEQGADPAIPSASGATALHHAAGNG 133


>gb|AAQ63971.1| unknown [Nicotiana benthamiana]
          Length = 469

 Score = 49.3 bits (116), Expect(3) = 1e-13
 Identities = 26/56 (46%), Positives = 38/56 (67%)
 Frame = +2

Query: 1127 KSKYDKLKEALLAGNLR*IKKLGKELADGKGVSETIANVKDSHGRGALHGAAQ*GK 1294
            + K  KL  A  +GN+   K L K+L DGKG++ T+A+VKD++ RGAL  AA+ G+
Sbjct: 12   REKVMKLLNAACSGNIALFKNLAKQLDDGKGLAGTVADVKDANKRGALIFAAREGQ 67



 Score = 43.9 bits (102), Expect(3) = 1e-13
 Identities = 20/39 (51%), Positives = 27/39 (69%)
 Frame = +1

Query: 1288 GQAE*CKYLLEELKFDVNWKDIEGNTALHYASGNGHLST 1404
            GQ   C++L+EELK DVN KD EG T + +A+  GH +T
Sbjct: 66   GQTAFCEFLVEELKLDVNTKDEEGETPVLHAARQGHTAT 104



 Score = 30.4 bits (67), Expect(3) = 1e-13
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 1494 YRIENGADLAASNTDNSTALHNAVSEG 1574
            Y IE GAD A  +T  +TALH+A   G
Sbjct: 107  YLIEQGADPATPSTSGATALHHAAGMG 133


>ref|XP_002531277.1| ankyrin repeat-containing protein, putative [Ricinus communis]
            gi|223529110|gb|EEF31090.1| ankyrin repeat-containing
            protein, putative [Ricinus communis]
          Length = 463

 Score = 50.8 bits (120), Expect(3) = 1e-12
 Identities = 24/56 (42%), Positives = 37/56 (66%)
 Frame = +2

Query: 1127 KSKYDKLKEALLAGNLR*IKKLGKELADGKGVSETIANVKDSHGRGALHGAAQ*GK 1294
            + K      A   GNL  +K +  +L DGKG+++T+A++KD++ RGALH AA+ GK
Sbjct: 12   RQKVQNFLTAACTGNLDLLKNIAAQLDDGKGMAKTVADIKDANKRGALHFAAREGK 67



 Score = 45.8 bits (107), Expect(3) = 1e-12
 Identities = 21/39 (53%), Positives = 28/39 (71%)
 Frame = +1

Query: 1288 GQAE*CKYLLEELKFDVNWKDIEGNTALHYASGNGHLST 1404
            G+ E CKYLLE+LK DV+ KD +G T L +A+  GH +T
Sbjct: 66   GKTEVCKYLLEDLKLDVDTKDDDGETPLIHAARQGHTAT 104



 Score = 23.9 bits (50), Expect(3) = 1e-12
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +3

Query: 1491 IYRIENGADLAASNTDNSTALHNAVSEG 1574
            +Y +E+GA+ A ++   +TALH++   G
Sbjct: 106  MYLLEHGANPAVASDLGATALHHSAGIG 133


>ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296087918|emb|CBI35201.3|
            unnamed protein product [Vitis vinifera]
          Length = 458

 Score = 52.0 bits (123), Expect(2) = 1e-11
 Identities = 26/56 (46%), Positives = 38/56 (67%)
 Frame = +2

Query: 1127 KSKYDKLKEALLAGNLR*IKKLGKELADGKGVSETIANVKDSHGRGALHGAAQ*GK 1294
            ++K  +   A   GNL   KKL  +L DGKG++ T+A+VKD++ RGALH AA+ G+
Sbjct: 12   RNKVQQFLNAACTGNLDLFKKLAAQLDDGKGLAGTVADVKDANKRGALHFAAREGR 67



 Score = 45.4 bits (106), Expect(2) = 1e-11
 Identities = 22/39 (56%), Positives = 27/39 (69%)
 Frame = +1

Query: 1288 GQAE*CKYLLEELKFDVNWKDIEGNTALHYASGNGHLST 1404
            G+ E CKYLLEELK DV+ KD +G T L +A+  GH  T
Sbjct: 66   GRTEVCKYLLEELKLDVDAKDEDGETPLLHAARQGHTVT 104


>ref|XP_002319644.1| predicted protein [Populus trichocarpa] gi|222858020|gb|EEE95567.1|
            predicted protein [Populus trichocarpa]
          Length = 451

 Score = 47.0 bits (110), Expect(2) = 2e-10
 Identities = 21/39 (53%), Positives = 28/39 (71%)
 Frame = +1

Query: 1288 GQAE*CKYLLEELKFDVNWKDIEGNTALHYASGNGHLST 1404
            GQ E CKYL+EELK DV+ KD +G T + +A+  GH +T
Sbjct: 58   GQTEVCKYLIEELKLDVDTKDEDGETPIIHAARQGHTAT 96



 Score = 46.6 bits (109), Expect(2) = 2e-10
 Identities = 22/56 (39%), Positives = 35/56 (62%)
 Frame = +2

Query: 1127 KSKYDKLKEALLAGNLR*IKKLGKELADGKGVSETIANVKDSHGRGALHGAAQ*GK 1294
            + K      A   GNL  +K +  +L +G G+S T+A++KD++ RGALH AA+ G+
Sbjct: 4    RQKVQHFLTAACVGNLDLLKNIASQLDEGSGMSNTVADIKDANKRGALHFAAREGQ 59


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