BLASTX nr result

ID: Coptis25_contig00010949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010949
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31521.3| unnamed protein product [Vitis vinifera]               69   1e-09
ref|XP_002275527.1| PREDICTED: uncharacterized protein LOC100256...    69   1e-09
ref|XP_002315271.1| predicted protein [Populus trichocarpa] gi|2...    64   5e-08
ref|XP_002523913.1| conserved hypothetical protein [Ricinus comm...    63   9e-08
ref|XP_004143606.1| PREDICTED: uncharacterized protein LOC101222...    59   1e-06

>emb|CBI31521.3| unnamed protein product [Vitis vinifera]
          Length = 360

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 32/47 (68%), Positives = 37/47 (78%)
 Frame = +3

Query: 3   SLRVVQHVEKIQVPSSWELIEMKTWKEVNWEEICFKECPGVITSEIQ 143
           SLRV+QHVE IQ PSSWE +E   WKEV+WEE  FKE PG+IT+ IQ
Sbjct: 296 SLRVMQHVETIQAPSSWEQLESNNWKEVSWEEKRFKEGPGMITAVIQ 342


>ref|XP_002275527.1| PREDICTED: uncharacterized protein LOC100256538 [Vitis vinifera]
          Length = 357

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 32/47 (68%), Positives = 37/47 (78%)
 Frame = +3

Query: 3   SLRVVQHVEKIQVPSSWELIEMKTWKEVNWEEICFKECPGVITSEIQ 143
           SLRV+QHVE IQ PSSWE +E   WKEV+WEE  FKE PG+IT+ IQ
Sbjct: 293 SLRVMQHVETIQAPSSWEQLESNNWKEVSWEEKRFKEGPGMITAVIQ 339


>ref|XP_002315271.1| predicted protein [Populus trichocarpa] gi|222864311|gb|EEF01442.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 28/47 (59%), Positives = 38/47 (80%)
 Frame = +3

Query: 3   SLRVVQHVEKIQVPSSWELIEMKTWKEVNWEEICFKECPGVITSEIQ 143
           SLR++Q VEKIQ PSSW+ +E+K  KE++WEE  F+E PG+IT+ IQ
Sbjct: 278 SLRIIQRVEKIQAPSSWQSLELKALKEISWEEKQFEEDPGMITALIQ 324


>ref|XP_002523913.1| conserved hypothetical protein [Ricinus communis]
           gi|223536843|gb|EEF38482.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 364

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 28/47 (59%), Positives = 39/47 (82%)
 Frame = +3

Query: 3   SLRVVQHVEKIQVPSSWELIEMKTWKEVNWEEICFKECPGVITSEIQ 143
           SLR++QHVEKIQVPS WE +E KT ++V+W+E  F++ PG+IT+ IQ
Sbjct: 304 SLRIMQHVEKIQVPSPWESMEQKTLEQVSWQEKHFQDGPGMITTIIQ 350


>ref|XP_004143606.1| PREDICTED: uncharacterized protein LOC101222891 [Cucumis sativus]
          Length = 365

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 23/47 (48%), Positives = 35/47 (74%)
 Frame = +3

Query: 3   SLRVVQHVEKIQVPSSWELIEMKTWKEVNWEEICFKECPGVITSEIQ 143
           SLR+++HV  I +PS W+L++ KTW E +W +  FK+ PG+I+S IQ
Sbjct: 301 SLRILEHVNTICIPSVWDLLDSKTWSETSWNKKSFKDAPGMISSTIQ 347


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