BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010943
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14979.3| unnamed protein product [Vitis vinifera]              226   7e-57
gb|AFK39377.1| unknown [Medicago truncatula]                          202   8e-50
ref|XP_003601216.1| RNA-binding protein [Medicago truncatula] gi...   201   2e-49
ref|XP_002302756.1| predicted protein [Populus trichocarpa] gi|2...   184   2e-44
ref|NP_001190910.1| D111/G-patch domain-containing protein [Arab...   176   6e-42

>emb|CBI14979.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  226 bits (575), Expect = 7e-57
 Identities = 130/296 (43%), Positives = 169/296 (57%), Gaps = 34/296 (11%)
 Frame = +2

Query: 101 FKWDEQTQLYFHASSGFYHDPKAGWYYSSKDGLYYKFENGSYVPFESDK---DE----EY 259
           FKWDE++QLYFH SSGFYHDP AGWYYSS+DGLYYKFE+G+YV  +S K   DE    E 
Sbjct: 14  FKWDEKSQLYFHPSSGFYHDPNAGWYYSSRDGLYYKFEDGNYVLLDSQKVQGDECAIDEG 73

Query: 260 DEFMRSLAVSDE--------------AIQDD---------NQCPK----CISDDRPENPP 358
            E +    + DE              + Q D         ++C      C+S    ENPP
Sbjct: 74  GEVLPGNTIQDEQCTNSYCWNDEYYSSFQGDESEGMGTAADECTPGHTTCVSSHDAENPP 133

Query: 359 PPSEWLEETLINLYLTGYSNSVTDLGDNLVTPTEPDVGCDSDLLVNGEESDSTREIEEGE 538
           PPSEWLE+TLI+LYL+GYS +  +  D +  P E D G +  L  +G   D      EGE
Sbjct: 134 PPSEWLEDTLIDLYLSGYSTTAINATDEVRMPLETDEGDNFKLSAHGNGDDHEL---EGE 190

Query: 539 WIVEDLQDATESSGRLSDEGISWDEENWRAQYGQVVQSGEXXXXXXXXXXXXXXEMFTNT 718
            ++ED    T+S G +  +G SWDEENWRAQYGQV++S +                  + 
Sbjct: 191 CVLEDHHGVTDSIGNVVAKGDSWDEENWRAQYGQVIKSEDSIPNFPVVD-------LWDW 243

Query: 719 VVXXXXXXXXXRQLSRLIGKLVKPSTKLHPSMPSGGRLLRTAAICETSVALVRVSS 886
            +          Q++RL+G+LV+ STKLHPSMPSGG L++TA ICE  + LVRV+S
Sbjct: 244 AMVSGVKKDGKGQVARLVGRLVRQSTKLHPSMPSGGGLMKTAPICEVHLDLVRVTS 299


>gb|AFK39377.1| unknown [Medicago truncatula]
          Length = 507

 Score =  202 bits (514), Expect = 8e-50
 Identities = 124/335 (37%), Positives = 162/335 (48%), Gaps = 60/335 (17%)
 Frame = +2

Query: 62  EKESARSAIESCQFKWDEQTQLYFHASSGFYHDPKAGWYYSSKDGLYYKFENGSYVPFES 241
           + E   S    C F WDE +QLYFHASSGFYHDP AGWYYS+KDG+YYKFE+G+YVP + 
Sbjct: 2   DPEPQNSENSDCTFVWDENSQLYFHASSGFYHDPNAGWYYSTKDGVYYKFEDGNYVPLDC 61

Query: 242 DKDEEYDEFMRSLAVSDE---AIQDDNQCPKCIS--------------------DDRPE- 349
           +KD++ +E         E    IQD N    C S                    DD    
Sbjct: 62  NKDDDVEEIYVCKETKPERTQQIQDINNEEDCASFLGNEIETNQQIGTLTEEAGDDAMNS 121

Query: 350 -------NPPPPSEWLEETLINLYLTGYSNSVTDLGDNLVTPTEPD-------------- 466
                  NPPPPSEWLE+TLI+LYL+GY+N      D +  P E +              
Sbjct: 122 TNSPTCGNPPPPSEWLEDTLIDLYLSGYNNIAVSAADTVTDPVETNGYNFTLETDAYRNA 181

Query: 467 -------VGCDSDLLVNGEES--------DSTREIEEGEWIVEDLQDATESSGRLSDEGI 601
                   G   +  +NG E             E+EEGEWI +   +   + G   DEGI
Sbjct: 182 EMGGDWTTGPADENDMNGNEKTVDDIVAYSDAYEVEEGEWIPDPEDENHLADGSSIDEGI 241

Query: 602 SWDEENWRAQYGQVVQSGEXXXXXXXXXXXXXXEMFTNTVVXXXXXXXXXRQLSRLIGKL 781
            ++EE WRAQYGQV++S E              EM   +            +++RL+G+L
Sbjct: 242 LFEEEKWRAQYGQVIESREDLVLEFPVLDLWNWEMVRAS------KKDGKDRVARLVGRL 295

Query: 782 VKPSTKLHPSMPSGGRLLRTAAICETSVALVRVSS 886
           VK S K HPS+ S  +  R+A ICE  + LVRV +
Sbjct: 296 VKQSAKRHPSISSVEKKFRSAPICEVDLDLVRVKT 330


>ref|XP_003601216.1| RNA-binding protein [Medicago truncatula]
           gi|355490264|gb|AES71467.1| RNA-binding protein
           [Medicago truncatula]
          Length = 560

 Score =  201 bits (510), Expect = 2e-49
 Identities = 124/335 (37%), Positives = 165/335 (49%), Gaps = 60/335 (17%)
 Frame = +2

Query: 62  EKESARSAIESCQFKWDEQTQLYFHASSGFYHDPKAGWYYSSKDGLYYKFENGSYVPFES 241
           + E   S    C F WDE +QLYFHASSGFYHDP AGWYYS+KDG+YYKFE+G+YVP + 
Sbjct: 2   DPEPQNSENSDCTFVWDENSQLYFHASSGFYHDPNAGWYYSTKDGVYYKFEDGNYVPLDC 61

Query: 242 DKDEEYDEFMRSLAVSDE---AIQDDNQCPKCIS--------------------DDRPE- 349
           +KD++ +E         E    IQD N    C S                    DD    
Sbjct: 62  NKDDDVEEIYVCKETKPERTQQIQDINNEEDCASFLGNEIETNQQIGTLTEEAGDDAMNS 121

Query: 350 -------NPPPPSEWLEETLINLYLTGYSNSVTDLGDNLVTPTEP---DVGCDSDLLVNG 499
                  NPPPPSEWLE+TLI+LYL+GY+N      D +  P E    +   ++D   N 
Sbjct: 122 TNSPTCGNPPPPSEWLEDTLIDLYLSGYNNIAVSAADTVTDPVETNGYNFTLETDAYRNA 181

Query: 500 E----------------ESDST----------REIEEGEWIVEDLQDATESSGRLSDEGI 601
           E                +++ T           E+EEGEWI +   +   + G   DEGI
Sbjct: 182 EMGGDWTTGPADENGMNDNEKTVDDIVAYSDAYEVEEGEWIPDPEDENHLADGSSIDEGI 241

Query: 602 SWDEENWRAQYGQVVQSGEXXXXXXXXXXXXXXEMFTNTVVXXXXXXXXXRQLSRLIGKL 781
            ++EE WRAQYGQV++S E              EM   +            +++RL+G+L
Sbjct: 242 LFEEEKWRAQYGQVIESREDLVLEFPVLDLWNWEMVRAS------KKDGKDRVARLVGRL 295

Query: 782 VKPSTKLHPSMPSGGRLLRTAAICETSVALVRVSS 886
           VK S K HPS+ S  +  R+A ICE  + LVRV +
Sbjct: 296 VKQSAKRHPSISSVEKKFRSAPICEVDLDLVRVKT 330


>ref|XP_002302756.1| predicted protein [Populus trichocarpa] gi|222844482|gb|EEE82029.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  184 bits (467), Expect = 2e-44
 Identities = 126/309 (40%), Positives = 151/309 (48%), Gaps = 36/309 (11%)
 Frame = +2

Query: 62  EKESARSAIESCQFKWDEQTQLYFHASSGFYHDPKAGWYYSSKDGLYYKFENGSYVPFES 241
           E +S  +  +   F WD+ TQLYFHASSGFYHDP AGW+YSS+DGLYYKFENGSYV  E 
Sbjct: 6   EPDSQETQRDDFAFDWDQTTQLYFHASSGFYHDPSAGWFYSSRDGLYYKFENGSYVLLEC 65

Query: 242 DKDEEYDEFMRSLAVSDEAIQDDNQC---------------------------------- 319
             D+  +E  R   V D  +QD++                                    
Sbjct: 66  S-DKVNNECERETFV-DNPLQDESFTHVEGNVYENLYSFPPANDSESFQHRGVVVDESNL 123

Query: 320 --PKCISDDRPENPPPPSEWLEETLINLYLTGYSNSVTDLGDNLVTPTEPDVGCDSDLLV 493
              +C S   PENPP PSEWLEETLIN++L+G SN   D  D+ V   + DV  D+    
Sbjct: 124 GYTECSSIQEPENPPAPSEWLEETLINIFLSG-SNRAIDASDDPVIALKMDVNNDN---- 178

Query: 494 NGEESDSTREIEEGEWIVEDLQDATESSGRLSDEGISWDEENWRAQYGQVVQSGEXXXXX 673
                    + EEG+ I       TE    L+D   S DEENWRAQYGQVV S E     
Sbjct: 179 --------CKPEEGDPI-------TEGHHGLADPDASRDEENWRAQYGQVVHSREEPVPD 223

Query: 674 XXXXXXXXXEMFTNTVVXXXXXXXXXRQLSRLIGKLVKPSTKLHPSMPSGGRLLRTAAIC 853
                    EM   +            Q +RL G+LVK S K HPSMPS     RTA IC
Sbjct: 224 FHAVDLWDWEMVKGS------RKVGKGQEARLAGQLVKRSAKSHPSMPSSCIRFRTAPIC 277

Query: 854 ETSVALVRV 880
           E  + LVRV
Sbjct: 278 EVHLDLVRV 286


>ref|NP_001190910.1| D111/G-patch domain-containing protein [Arabidopsis thaliana]
           gi|332660933|gb|AEE86333.1| D111/G-patch
           domain-containing protein [Arabidopsis thaliana]
          Length = 501

 Score =  176 bits (446), Expect = 6e-42
 Identities = 111/289 (38%), Positives = 143/289 (49%), Gaps = 25/289 (8%)
 Frame = +2

Query: 89  ESCQFKWDEQTQLYFHASSGFYHDPKAGWYYSSKDGLYYKFENGSYVPFESDK------- 247
           E   + WD  TQLY H SSGFYHDP AGWYY SKDG YYK ENG YVP E D+       
Sbjct: 13  EEDSYVWDSDTQLYIHHSSGFYHDPNAGWYYCSKDGRYYKHENGEYVPLEYDESSVNPPG 72

Query: 248 -----DEEYDEFMRSLAVS---------DEAIQDDNQCPK----CISDDRPENPPPPSEW 373
                +   D+  R  A S         + ++ +  + P     C +D  PE+   PS W
Sbjct: 73  DIVTYEPSEDDLGRKCAFSQAENVENGCEVSLSNPGETPSESTGCPNDQEPEHRQRPSSW 132

Query: 374 LEETLINLYLTGYSNSVTDLGDNLVTPTEPDVGCDSDLLVNGEESDSTREIEEGEWIVED 553
           +E+TLI LYL GY N             E +  C   L  NG+  D   E+EEGEWI E+
Sbjct: 133 VEDTLIELYLDGY-NQHPSASSYERASGENNQDCQM-LSANGD--DDAEELEEGEWIPEE 188

Query: 554 LQDATESSGRLSDEGISWDEENWRAQYGQVVQSGEXXXXXXXXXXXXXXEMFTNTVVXXX 733
             D  E +    +   S +EE W AQYGQV++S                ++   T     
Sbjct: 189 DFDPQEEN--FGEAAPSSEEERWLAQYGQVIESPGKTLPEIPSVDLWDWKLVCET----- 241

Query: 734 XXXXXXRQLSRLIGKLVKPSTKLHPSMPSGGRLLRTAAICETSVALVRV 880
                  Q++RL+G+LV+ S  LHPS+ SGG LL+TA ICE  + LVRV
Sbjct: 242 -READNEQVARLVGRLVRQSANLHPSVVSGGTLLKTAPICEARLHLVRV 289