BLASTX nr result

ID: Coptis25_contig00010941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010941
         (1636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268213.1| PREDICTED: protein CHLOROPLAST IMPORT APPARA...   201   6e-49
emb|CAN72725.1| hypothetical protein VITISV_015092 [Vitis vinifera]   201   6e-49
emb|CBI40095.3| unnamed protein product [Vitis vinifera]              196   2e-47
ref|XP_004149511.1| PREDICTED: protein CHLOROPLAST IMPORT APPARA...   166   1e-38
ref|XP_002308112.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-37

>ref|XP_002268213.1| PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like [Vitis
           vinifera]
          Length = 392

 Score =  201 bits (510), Expect = 6e-49
 Identities = 124/259 (47%), Positives = 152/259 (58%), Gaps = 15/259 (5%)
 Frame = -1

Query: 853 MSSCISGGGRAYGFDIDIVKXXXXXXXXXXXXXXXXXXXXXXXXXXPLALSXXXXXXXXX 674
           MSSC+SG GR YGF+++IVK                           +A+S         
Sbjct: 1   MSSCLSGAGRTYGFELEIVKSPSSTSPRTSHSSSPSSTISESSNSP-IAISTRKPRTPRK 59

Query: 673 XPNQTYNEAAALLSTVYPNIFSPKNLKKPNKHTKPYSSCSSEFAELLPPSPTFNNVEFLL 494
            PNQTYNEAAALLST YPNIFS KNLK P K TK + S   + +ELL P   F+   FLL
Sbjct: 60  RPNQTYNEAAALLSTAYPNIFSTKNLKNPCKFTKSHDSFLEDSSELLFPFRAFDASGFLL 119

Query: 493 HQPNLEKPTLRIEMKTSTNSRKKLCQTS-----PPISP-----CEEDFDADSILDEEVEE 344
           HQP  EKP+ ++  K   N  +K CQ+S     P  SP      EEDFDA+SILDEE+E 
Sbjct: 120 HQPVQEKPSFQMLPKV-VNCCEKPCQSSVESEFPGKSPELCDGFEEDFDAESILDEEIEG 178

Query: 343 GIDSIMGNLSVEND-----CNTSQFSPYFWDPMAMGGGFSMGGKFDFGYGINGSVSAWRQ 179
           GIDSIMGNLSV+N+      N   F+ Y+ + + MG GF  GGKF+FG+G+   V A R 
Sbjct: 179 GIDSIMGNLSVDNEMSDEATNPVCFNSYYGNGIPMGLGF--GGKFEFGFGMRRGVRALRH 236

Query: 178 TDDVDWWRFPTVDVLAISP 122
            D+ DWWRFPTVD+L ISP
Sbjct: 237 VDEGDWWRFPTVDILEISP 255


>emb|CAN72725.1| hypothetical protein VITISV_015092 [Vitis vinifera]
          Length = 392

 Score =  201 bits (510), Expect = 6e-49
 Identities = 126/259 (48%), Positives = 154/259 (59%), Gaps = 15/259 (5%)
 Frame = -1

Query: 853 MSSCISGGGRAYGFDIDIVKXXXXXXXXXXXXXXXXXXXXXXXXXXPLALSXXXXXXXXX 674
           MSSC+SG GR YGF+++IVK                           +A+S         
Sbjct: 1   MSSCLSGAGRTYGFELEIVKXPSSTSPRTSHSSSPSSTISESSNSP-IAISTRKXRTPRK 59

Query: 673 XPNQTYNEAAALLSTVYPNIFSPKNLKKPNKHTKPYSSCSSEFAELLPPSPTFNNVEFLL 494
            PNQTYNEAAALLST YPNIFS KNLK P K TK + S   + +ELL P   F+   FLL
Sbjct: 60  RPNQTYNEAAALLSTAYPNIFSTKNLKNPCKFTKSHDSFLEDSSELLFPFRAFDASGFLL 119

Query: 493 HQPNLEKPTLRIEMKTSTNSRKKLCQTS-----PPISP-----CEEDFDADSILDEEVEE 344
           HQP  EKP+ ++  K   N  +K CQ+S     P  SP      EEDFDA+SILDEE+E 
Sbjct: 120 HQPVQEKPSFQMLPKV-VNCCEKPCQSSVESEFPGKSPELCDGFEEDFDAESILDEEIEG 178

Query: 343 GIDSIMGNLSVEND-----CNTSQFSPYFWDPMAMGGGFSMGGKFDFGYGINGSVSAWRQ 179
           GIDSIMGNLSV+N+      N   F+ Y+ + + MG GF  GGKF+FG+G+   V A R 
Sbjct: 179 GIDSIMGNLSVDNEMSDEATNPVCFNSYYGNGIPMGLGF--GGKFEFGFGMRRGVRALRH 236

Query: 178 TDDVDWWRFPTVDVLAISP 122
            D+ DWWRFPTVD+L ISP
Sbjct: 237 VDEGDWWRFPTVDILEISP 255


>emb|CBI40095.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  196 bits (497), Expect = 2e-47
 Identities = 123/263 (46%), Positives = 148/263 (56%), Gaps = 8/263 (3%)
 Frame = -1

Query: 886 FLVESTFNLL---KMSSCISGGGRAYGFDIDIVKXXXXXXXXXXXXXXXXXXXXXXXXXX 716
           F  ESTF +    KMSSC+SG GR YGF+++IVK                          
Sbjct: 12  FPTESTFIIQSHKKMSSCLSGAGRTYGFELEIVKSPSSTSPRTSHSSSPSSTISESSNSP 71

Query: 715 PLALSXXXXXXXXXXPNQTYNEAAALLSTVYPNIFSPKNLKKPNKHTKPYSSCSSEFAEL 536
            +A+S          PNQTYNEAAALLST YPNIFS KNLK P K TK + S   + +EL
Sbjct: 72  -IAISTRKPRTPRKRPNQTYNEAAALLSTAYPNIFSTKNLKNPCKFTKSHDSFLEDSSEL 130

Query: 535 LPPSPTFNNVEFLLHQPNLEKPTLRIEMKTSTNSRKKLCQTSPPISPCEEDFDADSILDE 356
           L P   F+   FLLHQP  EKP              +LC         EEDFDA+SILDE
Sbjct: 131 LFPFRAFDASGFLLHQPVQEKP----------RKSPELC------DGFEEDFDAESILDE 174

Query: 355 EVEEGIDSIMGNLSVEND-----CNTSQFSPYFWDPMAMGGGFSMGGKFDFGYGINGSVS 191
           E+E GIDSIMGNLSV+N+      N   F+ Y+ + + MG GF  GGKF+FG+G+   V 
Sbjct: 175 EIEGGIDSIMGNLSVDNEMSDEATNPVCFNSYYGNGIPMGLGF--GGKFEFGFGMRRGVR 232

Query: 190 AWRQTDDVDWWRFPTVDVLAISP 122
           A R  D+ DWWRFPTVD+L ISP
Sbjct: 233 ALRHVDEGDWWRFPTVDILEISP 255


>ref|XP_004149511.1| PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucumis
           sativus]
          Length = 430

 Score =  166 bits (421), Expect = 1e-38
 Identities = 115/272 (42%), Positives = 141/272 (51%), Gaps = 29/272 (10%)
 Frame = -1

Query: 850 SSCISGGGRAYGFDIDIVKXXXXXXXXXXXXXXXXXXXXXXXXXXP-LALSXXXXXXXXX 674
           S CISGGGRAY FD++I+K                            LA+S         
Sbjct: 3   SPCISGGGRAYNFDLEILKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTPRK 62

Query: 673 XPNQTYNEAAALLSTVYPNIFSPKNLKKPNKHTKPYSSCSS---EFAELLPPSPTFNNVE 503
            PNQTYNEA  LLST YPN+FS K+L  P K TK +   SS   E AELL P    ++  
Sbjct: 63  RPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDSSG 122

Query: 502 FLLHQPNL-EKPTLRIEMKTSTNSRKKLCQTSPPISPCE-------------EDFDADSI 365
           FLLHQP L EKP  +I  K +      L +  P  SP E             EDFDA+SI
Sbjct: 123 FLLHQPLLEEKPNSQIHSKLT-----NLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESI 177

Query: 364 LDEEVEEGIDSIMGNLSVEN---------DCNTSQFSPYFWDPMAMGGGFSMGGKFDFGY 212
           LDEE+EEGIDSIMGNLSV+N          C  +   P  W+   +G GF+   KF+ G+
Sbjct: 178 LDEEIEEGIDSIMGNLSVDNLEKGNSTQDSCVNANNHPRNWNWNPIGLGFNQ--KFESGF 235

Query: 211 GINGSV--SAWRQTDDVDWWRFPTVDVLAISP 122
           G    +  +A R  D+ +WWRFPTVDV+ ISP
Sbjct: 236 GFRKGIERTAIRGVDNGNWWRFPTVDVIEISP 267


>ref|XP_002308112.1| predicted protein [Populus trichocarpa] gi|222854088|gb|EEE91635.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score =  163 bits (413), Expect = 1e-37
 Identities = 108/264 (40%), Positives = 137/264 (51%), Gaps = 21/264 (7%)
 Frame = -1

Query: 850 SSCISGGGRAYGFDIDIVKXXXXXXXXXXXXXXXXXXXXXXXXXXPLALSXXXXXXXXXX 671
           S CISGGGR YGFD++IVK                           LA+S          
Sbjct: 3   SPCISGGGRTYGFDLEIVKSSSTSSTRTSHTSSPSSTISESSNSP-LAISTRKSRTPRKR 61

Query: 670 PNQTYNEAAALLSTVYPNIFSPKNLKKPNKHTKPY--SSCSSEFAELLPPSPTFNNVEFL 497
           PNQTYNEAAALLST YPNIFS K+L K +K TKP   S    + ++LL P   F+N  FL
Sbjct: 62  PNQTYNEAAALLSTAYPNIFSTKHLTKSSKFTKPQDNSLLLDQSSDLLLPFRVFDNSGFL 121

Query: 496 LHQPNLEKPTLRIEMKTSTNSRKKLCQTSPPI----------SPCEEDFDADSILDEEVE 347
           +HQP   KP+   E + +  + K  CQ+S  +             +EDFDA+SILDEE E
Sbjct: 122 IHQPIQGKPSYGNESRFANFTDKSSCQSSGEVDFHGNSVELCDGLDEDFDAESILDEEFE 181

Query: 346 EGIDSIMGNLSVENDC-------NTSQFSPYFWDPMAMGGGFSMGGKFDFGYGI--NGSV 194
           EGIDSIMG+ S+ N+         +S F            G++ GGK  +G+GI     V
Sbjct: 182 EGIDSIMGHSSIGNEMVDEVPNGISSSFGGQMNSWYGSSMGYNFGGKSQYGHGIAMRRGV 241

Query: 193 SAWRQTDDVDWWRFPTVDVLAISP 122
            A R  D+ +WW FP VD+L ISP
Sbjct: 242 RALRHVDEGNWWDFPIVDMLQISP 265


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