BLASTX nr result

ID: Coptis25_contig00010938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010938
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267129.1| PREDICTED: probable LRR receptor-like serine...   117   1e-24
emb|CAN66709.1| hypothetical protein VITISV_006396 [Vitis vinifera]   117   1e-24
ref|XP_002267620.2| PREDICTED: probable LRR receptor-like serine...   116   2e-24
emb|CBI20016.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002267672.2| PREDICTED: probable LRR receptor-like serine...   115   5e-24

>ref|XP_002267129.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130 [Vitis vinifera]
           gi|296081492|emb|CBI20015.3| unnamed protein product
           [Vitis vinifera]
          Length = 1031

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/78 (67%), Positives = 65/78 (83%)
 Frame = +1

Query: 1   PRELGKLQSLRSLAFGSNNFSGSLPPELGSLVNLEQIYMDSAGVSGQIPRTFVNLVNMRV 180
           P+ELG+L  LRSLAFG+NNFSGSLP E+G+LV LEQ+Y DS+GVSG+IP TF NL ++  
Sbjct: 166 PKELGQLTDLRSLAFGTNNFSGSLPSEIGNLVKLEQLYFDSSGVSGEIPSTFANLQSLTT 225

Query: 181 MWASDNAFTGRLPDFIGN 234
           +WASDN  TG +PDFIGN
Sbjct: 226 VWASDNELTGNIPDFIGN 243


>emb|CAN66709.1| hypothetical protein VITISV_006396 [Vitis vinifera]
          Length = 1133

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/78 (67%), Positives = 65/78 (83%)
 Frame = +1

Query: 1   PRELGKLQSLRSLAFGSNNFSGSLPPELGSLVNLEQIYMDSAGVSGQIPRTFVNLVNMRV 180
           P+ELG+L  LRSLAFG+NNFSGSLP E+G+LV LEQ+Y DS+GVSG+IP TF NL ++  
Sbjct: 168 PKELGQLTDLRSLAFGTNNFSGSLPSEIGNLVKLEQLYFDSSGVSGEIPSTFANLQSLTT 227

Query: 181 MWASDNAFTGRLPDFIGN 234
           +WASDN  TG +PDFIGN
Sbjct: 228 VWASDNELTGNIPDFIGN 245


>ref|XP_002267620.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1031

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/78 (66%), Positives = 65/78 (83%)
 Frame = +1

Query: 1   PRELGKLQSLRSLAFGSNNFSGSLPPELGSLVNLEQIYMDSAGVSGQIPRTFVNLVNMRV 180
           P+ELG+L  LRS AFG+NNFSGSLP E+G+LV LEQ+Y DS+GVSG+IP TF NL ++ +
Sbjct: 166 PKELGQLTDLRSFAFGTNNFSGSLPSEIGNLVKLEQLYFDSSGVSGEIPSTFANLQSLTI 225

Query: 181 MWASDNAFTGRLPDFIGN 234
           +WASDN  TG +PDFIGN
Sbjct: 226 VWASDNELTGNIPDFIGN 243


>emb|CBI20016.3| unnamed protein product [Vitis vinifera]
          Length = 2193

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/78 (66%), Positives = 65/78 (83%)
 Frame = +1

Query: 1    PRELGKLQSLRSLAFGSNNFSGSLPPELGSLVNLEQIYMDSAGVSGQIPRTFVNLVNMRV 180
            P+ELG+L  LRS AFG+NNFSGSLP E+G+LV LEQ+Y DS+GVSG+IP TF NL ++ +
Sbjct: 1315 PKELGQLTDLRSFAFGTNNFSGSLPSEIGNLVKLEQLYFDSSGVSGEIPSTFANLQSLTI 1374

Query: 181  MWASDNAFTGRLPDFIGN 234
            +WASDN  TG +PDFIGN
Sbjct: 1375 VWASDNELTGNIPDFIGN 1392



 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/88 (59%), Positives = 64/88 (72%), Gaps = 10/88 (11%)
 Frame = +1

Query: 1   PRELGKLQSLRSLAFGSNNFSGSLPPELGSLVNLEQI----------YMDSAGVSGQIPR 150
           P+ELG+L  LRS+AFG+NNFSGSLP ELG+LV LEQ+          Y DS+G+SG IP 
Sbjct: 228 PKELGQLTDLRSIAFGTNNFSGSLPSELGNLVKLEQLICCYCLTNQCYFDSSGLSGDIPS 287

Query: 151 TFVNLVNMRVMWASDNAFTGRLPDFIGN 234
           TF NL ++  +WASDN  TG +PDFIGN
Sbjct: 288 TFANLQSLTTVWASDNELTGNIPDFIGN 315


>ref|XP_002267672.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1028

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/78 (66%), Positives = 64/78 (82%)
 Frame = +1

Query: 1   PRELGKLQSLRSLAFGSNNFSGSLPPELGSLVNLEQIYMDSAGVSGQIPRTFVNLVNMRV 180
           P+ELG+L  LRS+AFG+NNFSGSLP ELG+LV LEQ+Y DS+G+SG IP TF NL ++  
Sbjct: 162 PKELGQLTDLRSIAFGTNNFSGSLPSELGNLVKLEQLYFDSSGLSGDIPSTFANLQSLTT 221

Query: 181 MWASDNAFTGRLPDFIGN 234
           +WASDN  TG +PDFIGN
Sbjct: 222 VWASDNELTGNIPDFIGN 239


Top