BLASTX nr result
ID: Coptis25_contig00010937
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00010937
(1756 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274072.1| PREDICTED: putative E3 ubiquitin-protein lig... 276 e-119
gb|ABG37641.1| auxin-regulated protein-like protein [Populus tri... 251 e-111
emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera] 206 e-101
emb|CBI23653.3| unnamed protein product [Vitis vinifera] 198 4e-99
ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|2... 194 5e-98
>ref|XP_002274072.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35 [Vitis
vinifera] gi|302143289|emb|CBI21850.3| unnamed protein
product [Vitis vinifera]
Length = 497
Score = 276 bits (705), Expect(2) = e-119
Identities = 162/400 (40%), Positives = 213/400 (53%), Gaps = 1/400 (0%)
Frame = +1
Query: 559 TIESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSXXXXXXXXXXXXELAMY 738
TIE+HIC FSGWLREL+GPGF++ AP LLS+KIWVV++P G EL +Y
Sbjct: 134 TIENHICLFSGWLRELHGPGFLKALAPQLLSRKIWVVIIPSG---FNNPSKPLRLELVIY 190
Query: 739 NSLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKSTKKKFRLASSDEGERQQLQWLSN 918
++ QDA+P T IAL +EEPKF+Q P + IFDKS K +++LAS++EG++QQL+WL N
Sbjct: 191 SNFQDAQPCTVIALGNVNIEEPKFHQSDPALIIFDKSNKTRYKLASANEGDKQQLRWLYN 250
Query: 919 ACRGIPQVMHPTVLTNAHTSVVPPTMPPPNGDDVELAMAVNASLLLAREEMPQIMDS-HS 1095
ACRGIPQV+ +L +A S VP + + ELAMAV AS+ A + P ++ S
Sbjct: 251 ACRGIPQVLPTPMLHDARPS-VPASQTAT--EAAELAMAVGASIQSAAVDQPVLLSSTRL 307
Query: 1096 SPEVSNAIGWGSSADISSHNGWLXXXXXXXXXXXXXXWLDEPAEEAYNGWGXXXXXXXXN 1275
E S+ GWG+ D +SH GW W DE +NG G N
Sbjct: 308 GSEASSTNGWGNPVDNTSHGGWSLDGTPTHSASSSSGWADESKRGEFNGLGVPESRLIRN 367
Query: 1276 RTEQNISAPGTTSVSLGNSANTXXXXXXXXXXXXAFSSKESCGGWLNNQSENVQNGWGMS 1455
+T+ N + NN + VQ
Sbjct: 368 QTQLNKTQ--------------------------------------NNIPQVVQT----- 384
Query: 1456 ETGSRSNQNNSTSVPLTHATPQTASVPSAPPVPEGADDGPIQYPSIDFSPVDWTMPNMDN 1635
SN N + P PSAPP+PE +GP+ YP ID SPVD ++P +
Sbjct: 385 -----SNTNPVLASP----------APSAPPIPEALTEGPVYYPPIDLSPVDLSVPAAEY 429
Query: 1636 KDSRTSQTKEDGGASSSCVICLDAPVEGACVPCGHMAGCM 1755
+ TS+TK D G SSSCVIC +AP+EGAC+PCGHMAGCM
Sbjct: 430 DAAGTSKTK-DKGDSSSCVICWEAPIEGACIPCGHMAGCM 468
Score = 182 bits (462), Expect(2) = e-119
Identities = 94/132 (71%), Positives = 105/132 (79%)
Frame = +2
Query: 101 MGLQQSKEALLYQQVIDGNIEAIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 280
MG +QSK+ LLYQ V GNIEAIKAL REGASLEWFD E KT LIVAC + L VA+TL
Sbjct: 8 MGGRQSKDELLYQHVATGNIEAIKALCREGASLEWFDSEAKTPLIVACMDSNLIMVAQTL 67
Query: 281 IQLGANVNAYRPGGHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVEVARVKG 460
I LGANVNAYRPG AGT LHHA K+GLDQTVKLLLS GAN L NDD +T ++VAR+ G
Sbjct: 68 IDLGANVNAYRPGREAGTPLHHAAKRGLDQTVKLLLSKGANALVRNDDGQTSLDVARING 127
Query: 461 HCNVVRTIESHI 496
+ NVVRTIE+HI
Sbjct: 128 YINVVRTIENHI 139
>gb|ABG37641.1| auxin-regulated protein-like protein [Populus trichocarpa]
Length = 499
Score = 251 bits (640), Expect(2) = e-111
Identities = 153/402 (38%), Positives = 200/402 (49%), Gaps = 3/402 (0%)
Frame = +1
Query: 559 TIESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSXXXXXXXXXXXXELAMY 738
TIESHIC+F+GWLRE YGPGF+ FAP LS+KIW V+P GS EL +Y
Sbjct: 134 TIESHICYFTGWLREFYGPGFLRAFAPQFLSRKIWAAVIPQGSSNPMTPKKL---ELVIY 190
Query: 739 NSLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKSTKKKFRLASSDEGERQQLQWLSN 918
S QD +PRT IALW A++EEP F +P P + IFD+STK +++LAS++EG++QQL WL +
Sbjct: 191 PSSQDVQPRTVIALWNAEIEEPNFNRPDPELTIFDQSTKTQYKLASANEGDKQQLHWLYD 250
Query: 919 ACRGIPQVMHPTVLTNAHTSVVPPTMPPPNGDDVELAMAV-NASLLLAREEMPQIMDSHS 1095
AC GIPQVM P + N T+ VP + + V AMA+ S+ E+ P ++H
Sbjct: 251 ACSGIPQVMLPPMYGNPPTT-VPVVGHHTSAEAVGSAMAIGGGSIQSTTEDNPLHPNTHQ 309
Query: 1096 SPEVSNAIGWGSSADISSHNGWLXXXXXXXXXXXXXXWLDEPAEEAYNGWGXXXXXXXXN 1275
S EV NA GW SHN W W+ E +E +NG +
Sbjct: 310 SSEVINANGWEDPVRGDSHNRWGVTVASTHSEARSSGWMGEAPKEDHNGCAVPNMGPSGS 369
Query: 1276 R--TEQNISAPGTTSVSLGNSANTXXXXXXXXXXXXAFSSKESCGGWLNNQSENVQNGWG 1449
+ + P + S GN+A
Sbjct: 370 QDHVQTRYDIPPVSETSGGNTA-------------------------------------- 391
Query: 1450 MSETGSRSNQNNSTSVPLTHATPQTASVPSAPPVPEGADDGPIQYPSIDFSPVDWTMPNM 1629
SVP + P P E D GPI YPS DFS +D ++P +
Sbjct: 392 --------------SVPSAPSAP--------PIPDEELDAGPIHYPSFDFSLLDLSVPAI 429
Query: 1630 DNKDSRTSQTKEDGGASSSCVICLDAPVEGACVPCGHMAGCM 1755
+ S TS + GG SSSC+IC +APVEGAC+PCGHMAGCM
Sbjct: 430 ELGASVTSDVNK-GGTSSSCIICWEAPVEGACIPCGHMAGCM 470
Score = 181 bits (458), Expect(2) = e-111
Identities = 89/132 (67%), Positives = 108/132 (81%)
Frame = +2
Query: 101 MGLQQSKEALLYQQVIDGNIEAIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 280
M +QSK+ LLYQ I GN++A+KAL EGA LEW D++GKT LIVAC + LY+VAK L
Sbjct: 8 MTQKQSKDELLYQLAIAGNVDAVKALCSEGAILEWIDRDGKTPLIVACMDSGLYNVAKVL 67
Query: 281 IQLGANVNAYRPGGHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVEVARVKG 460
I++GANVNAYRPG HAGT LHHAVK+GL+QTVKLLLS GAN L NDD +T ++VAR+KG
Sbjct: 68 IEMGANVNAYRPGRHAGTPLHHAVKRGLEQTVKLLLSSGANALVRNDDCQTALDVARIKG 127
Query: 461 HCNVVRTIESHI 496
+ N+VRTIESHI
Sbjct: 128 NINIVRTIESHI 139
>emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]
Length = 500
Score = 206 bits (525), Expect(2) = e-101
Identities = 110/223 (49%), Positives = 138/223 (61%), Gaps = 25/223 (11%)
Frame = +1
Query: 562 IESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSXXXXXXXXXXXXELAMYN 741
IESHIC FSGWLRE YGPGF+EV AP +S+K+WVV+LPCGS ELA+Y+
Sbjct: 128 IESHICLFSGWLREFYGPGFLEVLAPQWVSRKVWVVILPCGSRKPTKPFKL---ELAIYS 184
Query: 742 SLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKST----------------------- 852
SLQDA+PRTTIALWKA ++E KF P P V I D ST
Sbjct: 185 SLQDAQPRTTIALWKANMDEAKFEDPDPAVIILDNSTISRGRRRRRCYTSREARCKPRAL 244
Query: 853 -KKKFRLASSDEGERQQLQWLSNACRGIPQVMH-PTVLTNAHTSVVPPTMPPPNGDDVEL 1026
+ + +LA + + QQLQW NAC+GIPQ MH P L NA T VPPT PP +D+EL
Sbjct: 245 RQTQIKLAPEKKSDSQQLQWFCNACKGIPQAMHPPAFLHNAQTPAVPPT-APPTAEDLEL 303
Query: 1027 AMAVNASLLLAREEMPQIMDSHSSPEVSNAIGWGSSADISSHN 1155
AMA+NAS+ A +E P ++DS SS E + W +S +I++HN
Sbjct: 304 AMAINASIQSAMQEGPPLLDSPSSFENGASTSWNNSVNITNHN 346
Score = 191 bits (486), Expect(2) = e-101
Identities = 94/132 (71%), Positives = 109/132 (82%)
Frame = +2
Query: 101 MGLQQSKEALLYQQVIDGNIEAIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 280
MG QQSK+ LL+QQV+ GN+E IKAL REGA LEW D+EGKT LIVAC +L++VAKTL
Sbjct: 1 MGQQQSKDELLHQQVVYGNVEGIKALSREGAGLEWTDREGKTPLIVACMFSELFNVAKTL 60
Query: 281 IQLGANVNAYRPGGHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVEVARVKG 460
I+LGANVNAYRPG HAGT LHHA KKGL++TV LLLSHGAN L +NDD +T ++VAR KG
Sbjct: 61 IELGANVNAYRPGRHAGTPLHHAAKKGLEETVNLLLSHGANALVMNDDCQTALDVARAKG 120
Query: 461 HCNVVRTIESHI 496
H VVR IESHI
Sbjct: 121 HSRVVRVIESHI 132
Score = 112 bits (280), Expect = 3e-22
Identities = 58/103 (56%), Positives = 69/103 (66%), Gaps = 3/103 (2%)
Frame = +1
Query: 1456 ETGSRSNQNNSTSVPLTHAT--PQTASVPSAPPVP-EGADDGPIQYPSIDFSPVDWTMPN 1626
E G +N + TH P AS SAPP+ E DDGP+QYPSID SPVD T P
Sbjct: 371 EAGPSTNSTQHIQIE-THIPDIPVQASTASAPPIADEVVDDGPVQYPSIDSSPVDLTSPA 429
Query: 1627 MDNKDSRTSQTKEDGGASSSCVICLDAPVEGACVPCGHMAGCM 1755
+ + + Q+KE GGA+SSCVICLDAP+EGAC+PCGHMAGCM
Sbjct: 430 FETSAAASEQSKE-GGAASSCVICLDAPIEGACIPCGHMAGCM 471
>emb|CBI23653.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 198 bits (504), Expect(2) = 4e-99
Identities = 107/216 (49%), Positives = 132/216 (61%), Gaps = 25/216 (11%)
Frame = +1
Query: 562 IESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSXXXXXXXXXXXXELAMYN 741
IESHIC FSGWLRE YGPGF+EV AP +S+K+WVV+LPCGS ELA+Y+
Sbjct: 128 IESHICLFSGWLREFYGPGFLEVLAPQWVSRKVWVVILPCGSRKPTKPFKL---ELAIYS 184
Query: 742 SLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKST----------------------- 852
SLQDA+PRTTIALWKA ++E KF P P V I D ST
Sbjct: 185 SLQDAQPRTTIALWKANMDEAKFEDPDPAVIILDNSTISRGRRRRRCYTSREARCKPRAL 244
Query: 853 -KKKFRLASSDEGERQQLQWLSNACRGIPQVMH-PTVLTNAHTSVVPPTMPPPNGDDVEL 1026
+ + +LA + + QQLQW NAC+GIPQ MH P L NA T VPPT PP +D+EL
Sbjct: 245 RQTQIKLAPEKKSDSQQLQWFCNACKGIPQAMHPPAFLHNAQTPAVPPT-APPTAEDLEL 303
Query: 1027 AMAVNASLLLAREEMPQIMDSHSSPEVSNAIGWGSS 1134
AMA+NAS+ A +E P ++DS SS E + W +S
Sbjct: 304 AMAINASIQSAMQEGPPLLDSPSSFENGASTSWNNS 339
Score = 191 bits (486), Expect(2) = 4e-99
Identities = 94/132 (71%), Positives = 109/132 (82%)
Frame = +2
Query: 101 MGLQQSKEALLYQQVIDGNIEAIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 280
MG QQSK+ LL+QQV+ GN+E IKAL REGA LEW D+EGKT LIVAC +L++VAKTL
Sbjct: 1 MGQQQSKDELLHQQVVYGNVEGIKALSREGAGLEWTDREGKTPLIVACMFSELFNVAKTL 60
Query: 281 IQLGANVNAYRPGGHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVEVARVKG 460
I+LGANVNAYRPG HAGT LHHA KKGL++TV LLLSHGAN L +NDD +T ++VAR KG
Sbjct: 61 IELGANVNAYRPGRHAGTPLHHAAKKGLEETVNLLLSHGANALVMNDDCQTALDVARAKG 120
Query: 461 HCNVVRTIESHI 496
H VVR IESHI
Sbjct: 121 HSRVVRVIESHI 132
>ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|222833076|gb|EEE71553.1|
predicted protein [Populus trichocarpa]
Length = 444
Score = 194 bits (492), Expect(2) = 5e-98
Identities = 99/191 (51%), Positives = 127/191 (66%)
Frame = +1
Query: 562 IESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSXXXXXXXXXXXXELAMYN 741
IESHIC FSGWLRE YGPGF+EV AP L+S+ IWVVVLP GS ELA+Y+
Sbjct: 128 IESHICLFSGWLREFYGPGFLEVLAPRLVSRNIWVVVLPTGSRSPRMPYKL---ELAIYS 184
Query: 742 SLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKSTKKKFRLASSDEGERQQLQWLSNA 921
LQDA+P T IALWKA +E+PKF+ P V I D STK + +LA ++E ++QQLQW +A
Sbjct: 185 RLQDAQPHTIIALWKANLEQPKFHHADPTVMIVDNSTKTRLKLAPANERDKQQLQWFCDA 244
Query: 922 CRGIPQVMHPTVLTNAHTSVVPPTMPPPNGDDVELAMAVNASLLLAREEMPQIMDSHSSP 1101
C+GIPQVMHP + ++ PP+ +D E+AMA+NAS+ A E P I D+HSS
Sbjct: 245 CKGIPQVMHPPEFLSKSQNLAVQATAPPSDEDPEIAMAINASIQSAMVEQP-ISDTHSST 303
Query: 1102 EVSNAIGWGSS 1134
S++ SS
Sbjct: 304 GASSSTSCVSS 314
Score = 192 bits (488), Expect(2) = 5e-98
Identities = 97/132 (73%), Positives = 108/132 (81%)
Frame = +2
Query: 101 MGLQQSKEALLYQQVIDGNIEAIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 280
MG QQSK+ LLYQQV NIE IK L REGA LEW DKEGKT LIVAC NPQL++VAKTL
Sbjct: 1 MGQQQSKDELLYQQVNCSNIEGIKNLCREGARLEWIDKEGKTPLIVACLNPQLFNVAKTL 60
Query: 281 IQLGANVNAYRPGGHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVEVARVKG 460
I+LGANVNAYRPG + G LHHA K+GL+ TVKLLLSHGAN L +NDD +TP+EVAR KG
Sbjct: 61 IELGANVNAYRPGRNGGAPLHHAAKRGLENTVKLLLSHGANALMMNDDCQTPLEVARAKG 120
Query: 461 HCNVVRTIESHI 496
+ NVVR IESHI
Sbjct: 121 YGNVVRAIESHI 132
Score = 110 bits (274), Expect = 2e-21
Identities = 59/103 (57%), Positives = 70/103 (67%), Gaps = 4/103 (3%)
Frame = +1
Query: 1459 TGSRSNQN---NSTSVPLTHATPQTASVPSAPP-VPEGADDGPIQYPSIDFSPVDWTMPN 1626
+GS + Q NS+ + AT SVPSAPP V E +DGPI YPSID SP+D +
Sbjct: 314 SGSSTQQTKILNSSVADVQTATDAQDSVPSAPPIVDELIEDGPIHYPSIDSSPLDISSLP 373
Query: 1627 MDNKDSRTSQTKEDGGASSSCVICLDAPVEGACVPCGHMAGCM 1755
++N T + KEDGG SSSCVICLDAPVEGAC+PCGHM GCM
Sbjct: 374 IENLPENTGEKKEDGG-SSSCVICLDAPVEGACIPCGHMVGCM 415