BLASTX nr result

ID: Coptis25_contig00010933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010933
         (1401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-...   459   e-127
ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   454   e-125
ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-...   454   e-125
ref|XP_002515097.1| dicer-1, putative [Ricinus communis] gi|2235...   451   e-124
gb|EAZ25399.1| hypothetical protein OsJ_09217 [Oryza sativa Japo...   450   e-124

>ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Vitis vinifera]
          Length = 1971

 Score =  459 bits (1182), Expect = e-127
 Identities = 231/277 (83%), Positives = 243/277 (87%), Gaps = 1/277 (0%)
 Frame = -1

Query: 1371 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALEAQIREFVKEVRDELLKPGFNSF 1192
            PGRLTDLRAAAVNNENFARVAVKHKLH+HLRHGSSALE QIR+FVKEV+DEL KPGFNSF
Sbjct: 1694 PGRLTDLRAAAVNNENFARVAVKHKLHIHLRHGSSALEKQIRDFVKEVQDELSKPGFNSF 1753

Query: 1191 GLGDCKAPKVLGDIFESIAGAIFLDSGRNTAVVWRVFQPLLQPMVTPETLPMHPVRELQE 1012
            GLGDCKAPKVLGDI ESIAGAIFLDSGR+TAVVW+VFQPLL PMVTPETLPMHPVRELQE
Sbjct: 1754 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPLLHPMVTPETLPMHPVRELQE 1813

Query: 1011 RCQQQAEGLEYKATRNGNLATVEVYIDGLQIGSAQNPQKKMAQKLAARNALVVL-XXXXX 835
            RCQQQAEGLEYKATR+GNLATVEV+IDG+QIG AQNPQKKMAQKLAARNALVVL      
Sbjct: 1814 RCQQQAEGLEYKATRSGNLATVEVFIDGVQIGIAQNPQKKMAQKLAARNALVVLKERETA 1873

Query: 834  XXXXXXXXXXXXXXXXSHTLTRQTLNDICLRKQWPMPQYRCVYEGGPAHAKRFTYSVRVN 655
                            S T TRQTLNDICLR+ WPMP YRCV EGGPAHAKRFT++VRVN
Sbjct: 1874 EAKEGDDENGKKKKNGSQTFTRQTLNDICLRRNWPMPVYRCVNEGGPAHAKRFTFAVRVN 1933

Query: 654  TTDKGWTDDCIGEPMPSVKKAKDSAAVLLLELLNGWY 544
            T DKGWTD+CIGEPMPSVKKAKDSAAVLLLELLN WY
Sbjct: 1934 TNDKGWTDECIGEPMPSVKKAKDSAAVLLLELLNKWY 1970


>ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 1-like
            [Cucumis sativus]
          Length = 1987

 Score =  454 bits (1169), Expect = e-125
 Identities = 230/277 (83%), Positives = 242/277 (87%), Gaps = 1/277 (0%)
 Frame = -1

Query: 1371 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALEAQIREFVKEVRDELLKPGFNSF 1192
            PGRLTDLRAAAVNNENFARVAVKH LH+HLRHGSSALE QIR+FVKEV+DELLKPGFNSF
Sbjct: 1710 PGRLTDLRAAAVNNENFARVAVKHNLHIHLRHGSSALEKQIRDFVKEVQDELLKPGFNSF 1769

Query: 1191 GLGDCKAPKVLGDIFESIAGAIFLDSGRNTAVVWRVFQPLLQPMVTPETLPMHPVRELQE 1012
            GLGDCKAPKVLGDI ESIAGAIFLDSGR+TAVVWRVFQPLL PMVTPETLPMHPVRELQE
Sbjct: 1770 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWRVFQPLLHPMVTPETLPMHPVRELQE 1829

Query: 1011 RCQQQAEGLEYKATRNGNLATVEVYIDGLQIGSAQNPQKKMAQKLAARNALVVLXXXXXX 832
            RCQQQAEGLEYKATR GNLATVEV+IDG+QIG AQNPQKKMAQKLAARNAL VL      
Sbjct: 1830 RCQQQAEGLEYKATRIGNLATVEVFIDGVQIGIAQNPQKKMAQKLAARNALAVLKEKEMD 1889

Query: 831  XXXXXXXXXXXXXXXSH-TLTRQTLNDICLRKQWPMPQYRCVYEGGPAHAKRFTYSVRVN 655
                            + T TRQTLNDICLR+ WPMP YRCV EGGPAHAKRFT++VRVN
Sbjct: 1890 DAKEKXEDNGKKKKNGNQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVN 1949

Query: 654  TTDKGWTDDCIGEPMPSVKKAKDSAAVLLLELLNGWY 544
            TTDKGWTD+C+GEPMPSVKKAKDSAAVLLLELLN  Y
Sbjct: 1950 TTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKLY 1986


>ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Cucumis sativus]
          Length = 1986

 Score =  454 bits (1169), Expect = e-125
 Identities = 229/277 (82%), Positives = 241/277 (87%), Gaps = 1/277 (0%)
 Frame = -1

Query: 1371 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALEAQIREFVKEVRDELLKPGFNSF 1192
            PGRLTDLRAAAVNNENFARVAVKH LH+HLRHGSSALE QIR+FVKEV+DELLKPGFNSF
Sbjct: 1709 PGRLTDLRAAAVNNENFARVAVKHNLHIHLRHGSSALEKQIRDFVKEVQDELLKPGFNSF 1768

Query: 1191 GLGDCKAPKVLGDIFESIAGAIFLDSGRNTAVVWRVFQPLLQPMVTPETLPMHPVRELQE 1012
            GLGDCKAPKVLGDI ESIAGAIFLDSGR+TAVVWRVFQPLL PMVTPETLPMHPVRELQE
Sbjct: 1769 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWRVFQPLLHPMVTPETLPMHPVRELQE 1828

Query: 1011 RCQQQAEGLEYKATRNGNLATVEVYIDGLQIGSAQNPQKKMAQKLAARNALVVLXXXXXX 832
            RCQQQAEGLEYKATR GNLATVEV+IDG+QIG AQNPQKKMAQKLAARNAL VL      
Sbjct: 1829 RCQQQAEGLEYKATRIGNLATVEVFIDGVQIGIAQNPQKKMAQKLAARNALAVLKEKEMD 1888

Query: 831  XXXXXXXXXXXXXXXSH-TLTRQTLNDICLRKQWPMPQYRCVYEGGPAHAKRFTYSVRVN 655
                            + T TRQTLNDICLR+ WPMP YRCV EGGPAHAKRFT++VRVN
Sbjct: 1889 DAKEKIEDNGKKKKNGNQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVN 1948

Query: 654  TTDKGWTDDCIGEPMPSVKKAKDSAAVLLLELLNGWY 544
            TTDKGWTD+C+GEPMPSVKKAKDSAAVLLLELLN  Y
Sbjct: 1949 TTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKLY 1985


>ref|XP_002515097.1| dicer-1, putative [Ricinus communis] gi|223545577|gb|EEF47081.1|
            dicer-1, putative [Ricinus communis]
          Length = 1543

 Score =  451 bits (1160), Expect = e-124
 Identities = 225/277 (81%), Positives = 242/277 (87%), Gaps = 1/277 (0%)
 Frame = -1

Query: 1371 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALEAQIREFVKEVRDELLKPGFNSF 1192
            PGRLTDLRAAAVNNENFARVAV HKLHVHLRHGSSALE QIR+FV+EV+DEL KPGFNSF
Sbjct: 1266 PGRLTDLRAAAVNNENFARVAVNHKLHVHLRHGSSALEKQIRDFVREVQDELSKPGFNSF 1325

Query: 1191 GLGDCKAPKVLGDIFESIAGAIFLDSGRNTAVVWRVFQPLLQPMVTPETLPMHPVRELQE 1012
            GLGDCKAPKVLGDI ESIAGAIFLDSGR+TAVVW+VFQPLL PMVTPETLPMHPVRELQE
Sbjct: 1326 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPLLHPMVTPETLPMHPVRELQE 1385

Query: 1011 RCQQQAEGLEYKATRNGNLATVEVYIDGLQIGSAQNPQKKMAQKLAARNALVVLXXXXXX 832
            RCQQQAEGLEYKATR+GNLATVEV+IDG+Q+G AQNPQKKMAQKLAARNALV+L      
Sbjct: 1386 RCQQQAEGLEYKATRSGNLATVEVFIDGVQVGVAQNPQKKMAQKLAARNALVILKDKETA 1445

Query: 831  XXXXXXXXXXXXXXXSH-TLTRQTLNDICLRKQWPMPQYRCVYEGGPAHAKRFTYSVRVN 655
                            + T TRQTLNDICLR+ WPMP YRCV EGGPAHAKRFT++VRVN
Sbjct: 1446 EAKEKGNDNGKKKKNGNQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVN 1505

Query: 654  TTDKGWTDDCIGEPMPSVKKAKDSAAVLLLELLNGWY 544
            TTD+GWTD+C+GEPMPSVKKAKDSAAVLLLELLN  Y
Sbjct: 1506 TTDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNKRY 1542


>gb|EAZ25399.1| hypothetical protein OsJ_09217 [Oryza sativa Japonica Group]
          Length = 1883

 Score =  450 bits (1157), Expect = e-124
 Identities = 225/273 (82%), Positives = 241/273 (88%)
 Frame = -1

Query: 1371 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALEAQIREFVKEVRDELLKPGFNSF 1192
            PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALE QIREFVK+V++ELLKPGFNSF
Sbjct: 1600 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGFNSF 1659

Query: 1191 GLGDCKAPKVLGDIFESIAGAIFLDSGRNTAVVWRVFQPLLQPMVTPETLPMHPVRELQE 1012
            GLGDCKAPKVLGDI ESIAGAIFLDSG +T+VVW+VFQPLL PMVTPETLPMHPVRELQE
Sbjct: 1660 GLGDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPMHPVRELQE 1719

Query: 1011 RCQQQAEGLEYKATRNGNLATVEVYIDGLQIGSAQNPQKKMAQKLAARNALVVLXXXXXX 832
            RCQQQAEGLEYKA+R GN+ATVEV++DG+QIG AQNPQKKMAQKLAARNALVVL      
Sbjct: 1720 RCQQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALVVL-KEKET 1778

Query: 831  XXXXXXXXXXXXXXXSHTLTRQTLNDICLRKQWPMPQYRCVYEGGPAHAKRFTYSVRVNT 652
                           +   TRQTLNDICLR+QWPMPQYRCV EGGPAHAKRF YSVRVNT
Sbjct: 1779 ATKKEDERDGEKKNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRVNT 1838

Query: 651  TDKGWTDDCIGEPMPSVKKAKDSAAVLLLELLN 553
            +D+GWTD+CIGEPMPSVKKAKDSAAVLLLELLN
Sbjct: 1839 SDRGWTDECIGEPMPSVKKAKDSAAVLLLELLN 1871


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