BLASTX nr result
ID: Coptis25_contig00010930
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00010930
(987 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308505.1| predicted protein [Populus trichocarpa] gi|2... 102 1e-48
ref|NP_001147307.1| protein binding protein [Zea mays] gi|195609... 98 3e-47
ref|XP_002462434.1| hypothetical protein SORBIDRAFT_02g025520 [S... 94 4e-47
ref|XP_003544578.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-... 103 4e-47
ref|NP_197591.1| E3 ubiquitin-protein ligase AIP2 [Arabidopsis t... 100 1e-46
>ref|XP_002308505.1| predicted protein [Populus trichocarpa] gi|222854481|gb|EEE92028.1|
predicted protein [Populus trichocarpa]
Length = 307
Score = 102 bits (255), Expect(4) = 1e-48
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = -2
Query: 233 MQELPCKHLFHLLCLKPWLDKHNSCPVCRHELPTDDHAYESWKEREREA 87
MQELPCKH FH CLKPWLD+HNSCP+CRHEL TDDHAYESWKERE+EA
Sbjct: 240 MQELPCKHRFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREKEA 288
Score = 73.6 bits (179), Expect(4) = 1e-48
Identities = 38/88 (43%), Positives = 57/88 (64%)
Frame = -3
Query: 568 DNNTSQRASELMEEMVNSMGEISEFRNLIDTIEASLQGIGASRPIRSPPASKEVIENLPV 389
DNNT + AS L+ E++++ D + + +G++ P R PPASKEV+ LPV
Sbjct: 162 DNNTIETASNLLGELMSNF----------DDMIPEIMEMGSTAP-RVPPASKEVVAKLPV 210
Query: 388 ISITEEIMARLGSDMQCVVCKENLDISE 305
I+ITEEI+A LG D +C +CKENL +++
Sbjct: 211 ITITEEILAELGKDAECAICKENLVVND 238
Score = 51.2 bits (121), Expect(4) = 1e-48
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = -1
Query: 987 LLTNYYPSASPSLQESFYVCICHVASILQTRYTECELWVAG 865
LL +YPSASPSL+++FY +C VA++L+TRY W+AG
Sbjct: 35 LLRLHYPSASPSLRKTFYSVVCRVATVLKTRYIAPGFWLAG 75
Score = 33.9 bits (76), Expect(4) = 1e-48
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 18/73 (24%)
Frame = -2
Query: 800 FEEAERLVVDSSERAYMTTCIEIANEHINK------------------LVMDAVPPRPTL 675
F+EA L DS+E+ ++ CI A EH+++ L +D PPRP
Sbjct: 79 FQEALLLTSDSTEKEHLKNCIAQAKEHLDQIENPPDVSQNSGYLFEGHLTVDPEPPRPQW 138
Query: 674 QVANELLATLGVV 636
V + +L ++ +
Sbjct: 139 LVQSNILNSMATL 151
>ref|NP_001147307.1| protein binding protein [Zea mays] gi|195609736|gb|ACG26698.1|
protein binding protein [Zea mays]
gi|414589559|tpg|DAA40130.1| TPA: putative RING zinc
finger domain superfamily protein [Zea mays]
gi|414589560|tpg|DAA40131.1| TPA: putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 324
Score = 97.8 bits (242), Expect(4) = 3e-47
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = -2
Query: 233 MQELPCKHLFHLLCLKPWLDKHNSCPVCRHELPTDDHAYESWKEREREAKSN 78
MQELPCKHLFH LCLKPWLD++NSCP+CRHEL TDDH YES KERERE + +
Sbjct: 257 MQELPCKHLFHPLCLKPWLDENNSCPICRHELRTDDHVYESRKEREREEEED 308
Score = 87.0 bits (214), Expect(4) = 3e-47
Identities = 44/88 (50%), Positives = 62/88 (70%)
Frame = -3
Query: 568 DNNTSQRASELMEEMVNSMGEISEFRNLIDTIEASLQGIGASRPIRSPPASKEVIENLPV 389
+N T RA E+ ++N + IS R+L +E SLQGI P R+PPASKEV+ NLPV
Sbjct: 169 NNRTVPRAEEITPAIMNLLETISGDRDLETALEESLQGI-IEYPQRAPPASKEVVANLPV 227
Query: 388 ISITEEIMARLGSDMQCVVCKENLDISE 305
I++TEE+M+RLGS+ +C VC+ENL + +
Sbjct: 228 IAVTEEVMSRLGSETECAVCRENLVVDD 255
Score = 42.4 bits (98), Expect(4) = 3e-47
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -1
Query: 972 YPSASPSLQESFYVCICHVASILQTRYTECELWVAGKEL 856
Y ASP+L+++ Y +C VA++LQTRYT W G L
Sbjct: 43 YAGASPALRKAMYSTVCRVATVLQTRYTAPGFWHVGLNL 81
Score = 29.6 bits (65), Expect(4) = 3e-47
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 22/81 (27%)
Frame = -2
Query: 800 FEEAERLVVDSSERAYMTTCIEIANEHINK----------------------LVMDAVPP 687
F E+LV + +E+ ++ TCI A EH+++ L + PP
Sbjct: 82 FVGIEKLVSNPAEKEHLKTCISRAREHLDEKENEDSVPSNREADTRFLFEGHLTVGQEPP 141
Query: 686 RPTLQVANELLATLGVVPGSS 624
P VA L L ++ SS
Sbjct: 142 PPAWLVAQNLTRELSILTESS 162
>ref|XP_002462434.1| hypothetical protein SORBIDRAFT_02g025520 [Sorghum bicolor]
gi|241925811|gb|EER98955.1| hypothetical protein
SORBIDRAFT_02g025520 [Sorghum bicolor]
Length = 324
Score = 94.0 bits (232), Expect(4) = 4e-47
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = -2
Query: 233 MQELPCKHLFHLLCLKPWLDKHNSCPVCRHELPTDDHAYESWKEREREAKSN 78
MQELPCKHLFH CLKPWLD++NSCP+CRHEL TDDH YES KERE+E + +
Sbjct: 257 MQELPCKHLFHPPCLKPWLDENNSCPICRHELRTDDHVYESRKEREKEEEED 308
Score = 87.4 bits (215), Expect(4) = 4e-47
Identities = 44/87 (50%), Positives = 61/87 (70%)
Frame = -3
Query: 565 NNTSQRASELMEEMVNSMGEISEFRNLIDTIEASLQGIGASRPIRSPPASKEVIENLPVI 386
N T RA E+ ++N + IS R+L +E SLQGI P R+PPASKEV+ NLPVI
Sbjct: 170 NRTVPRAEEITPAIMNLLESISGDRDLETALEESLQGI-IEHPPRAPPASKEVVANLPVI 228
Query: 385 SITEEIMARLGSDMQCVVCKENLDISE 305
++TEE++ARLGS+ +C VC+ENL + +
Sbjct: 229 AVTEEVIARLGSETECAVCRENLVVDD 255
Score = 45.1 bits (105), Expect(4) = 4e-47
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = -1
Query: 972 YPSASPSLQESFYVCICHVASILQTRYTECELWVAGKEL 856
Y ASP+L++S Y +C VA++LQTRYT W AG L
Sbjct: 43 YAGASPTLRKSMYSTVCRVATVLQTRYTAPGFWRAGLNL 81
Score = 30.0 bits (66), Expect(4) = 4e-47
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 22/81 (27%)
Frame = -2
Query: 800 FEEAERLVVDSSERAYMTTCIEIANEHINK----------------------LVMDAVPP 687
F E+LV + +E+ ++ TCI A EH+++ L + PP
Sbjct: 82 FMGTEKLVSNPAEKEHLKTCISRAREHLDEKENEDSMPSSREADTRFLFEGHLTVGQEPP 141
Query: 686 RPTLQVANELLATLGVVPGSS 624
P VA L L ++ SS
Sbjct: 142 PPAWLVAQNLTRELSILTESS 162
>ref|XP_003544578.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 1 [Glycine
max]
Length = 313
Score = 103 bits (257), Expect(4) = 4e-47
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = -2
Query: 233 MQELPCKHLFHLLCLKPWLDKHNSCPVCRHELPTDDHAYESWKEREREAK 84
MQELPCKH FH CLKPWLD+HNSCP+CRHEL TDDHAYESWKERE+EA+
Sbjct: 246 MQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREKEAE 295
Score = 68.6 bits (166), Expect(4) = 4e-47
Identities = 34/88 (38%), Positives = 57/88 (64%)
Frame = -3
Query: 568 DNNTSQRASELMEEMVNSMGEISEFRNLIDTIEASLQGIGASRPIRSPPASKEVIENLPV 389
+ T A+ ++E+++N + E+ ++D +G P R+PPASKEV+ NLPV
Sbjct: 168 NETTQDDATNMLEDLLNRLEEVVPL--MVD--------VGPVAP-RAPPASKEVVANLPV 216
Query: 388 ISITEEIMARLGSDMQCVVCKENLDISE 305
I++TEEI+A LG D +C +C+ENL +++
Sbjct: 217 ITLTEEILANLGKDAECAICRENLVLND 244
Score = 51.2 bits (121), Expect(4) = 4e-47
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -1
Query: 987 LLTNYYPSASPSLQESFYVCICHVASILQTRYTECELWVAG 865
LL YPSASP+L++SFY +C VA++L+TRYT W AG
Sbjct: 34 LLQRTYPSASPALRKSFYSVLCRVATVLKTRYTAPGFWNAG 74
Score = 33.1 bits (74), Expect(4) = 4e-47
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 24/75 (32%)
Frame = -2
Query: 800 FEEAERLVVDSSERAYMTTCIEIANEHIN------------------------KLVMDAV 693
FE+A LV D SE+ ++ CI A EH++ L +D
Sbjct: 78 FEQAHLLVSDPSEKEHLKACIAQAREHLHLEDNPSQTLRPADNQANRGYLFEGHLTVDPE 137
Query: 692 PPRPTLQVANELLAT 648
PP+P V + LL T
Sbjct: 138 PPQPQWLVQSNLLTT 152
>ref|NP_197591.1| E3 ubiquitin-protein ligase AIP2 [Arabidopsis thaliana]
gi|75330749|sp|Q8RXD3.1|AIP2_ARATH RecName: Full=E3
ubiquitin-protein ligase AIP2; AltName:
Full=ABI3-interacting protein 2
gi|19698965|gb|AAL91218.1| ABI3-interacting protein 2
[Arabidopsis thaliana] gi|23198060|gb|AAN15557.1|
ABI3-interacting protein 2 [Arabidopsis thaliana]
gi|66865964|gb|AAY57616.1| RING finger family protein
[Arabidopsis thaliana] gi|332005520|gb|AED92903.1| E3
ubiquitin-protein ligase AIP2 [Arabidopsis thaliana]
Length = 310
Score = 100 bits (249), Expect(4) = 1e-46
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = -2
Query: 233 MQELPCKHLFHLLCLKPWLDKHNSCPVCRHELPTDDHAYESWKEREREAK 84
MQELPCKH FH CLKPWLD+HNSCP+CRHELPTDD YE+WKERE+EA+
Sbjct: 243 MQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDQKYENWKEREKEAE 292
Score = 63.9 bits (154), Expect(4) = 1e-46
Identities = 33/86 (38%), Positives = 51/86 (59%)
Frame = -3
Query: 562 NTSQRASELMEEMVNSMGEISEFRNLIDTIEASLQGIGASRPIRSPPASKEVIENLPVIS 383
NT + LM+E++N + I +++D P R+PPASKEV+E LPVI
Sbjct: 168 NTIGETANLMQELINGLDMI--IPDILDD----------GGPPRAPPASKEVVEKLPVII 215
Query: 382 ITEEIMARLGSDMQCVVCKENLDISE 305
TEE++ + G++ +C +CKENL I +
Sbjct: 216 FTEELLKKFGAEAECCICKENLVIGD 241
Score = 51.2 bits (121), Expect(4) = 1e-46
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = -1
Query: 987 LLTNYYPSASPSLQESFYVCICHVASILQTRYTECELWVAGKEL 856
LL ++Y S+SPSL++ FY+ + VA++L+TRYT WVAG L
Sbjct: 41 LLRDHYSSSSPSLRKQFYIVVSRVATVLKTRYTATGFWVAGLSL 84
Score = 39.3 bits (90), Expect(4) = 1e-46
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 17/74 (22%)
Frame = -2
Query: 800 FEEAERLVVDSSERAYMTTCIEIANEHINK-----------------LVMDAVPPRPTLQ 672
FEEAERLV D+SE+ ++ +C+ A E +++ L +D PP+P
Sbjct: 85 FEEAERLVSDASEKKHLKSCVAQAKEQLSEVDNQPTESSQGYLFEGHLTVDREPPQPQWL 144
Query: 671 VANELLATLGVVPG 630
V L++ + G
Sbjct: 145 VQQNLMSAFASIVG 158