BLASTX nr result
ID: Coptis25_contig00010929
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00010929
(991 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera] 307 2e-81
ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containi... 304 2e-80
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 298 1e-78
emb|CBI36964.3| unnamed protein product [Vitis vinifera] 298 1e-78
ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2... 290 4e-76
>emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
Length = 494
Score = 307 bits (787), Expect = 2e-81
Identities = 155/332 (46%), Positives = 227/332 (68%), Gaps = 3/332 (0%)
Frame = +1
Query: 4 KSRGVEAAEKYFTDLPNSAKNKSTYGALLHCFCCEEMTEKAMMLFGKMKELNFPINSFDY 183
K+ G+ AE YF L SAK TYGALL+C+C E M +KA+ LF K+KELNF ++ Y
Sbjct: 108 KTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMVDKAVELFKKLKELNFVSSALSY 167
Query: 184 CSLMSLHLRLGQPEKVPLLHEEIKQKGIKPHLFHYKLLINSYASLKDVKSVEGVMEEIKM 363
+++SL+LR+GQPEKVP L E+++K I L+ Y LL+NSYAS+KD ++VE V+E++K
Sbjct: 168 NNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSYASVKDFEAVEQVLEKMKK 227
Query: 364 IKGITPDWAFYSNVAAIYVAAGYHEKAELTLKEIEISK-LNDPKAFHFLLSIYASMGKVE 540
+G+ DW Y N+A IYV AG+ +KA L+++E +K L+DP+AF L+++YA +E
Sbjct: 228 -RGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQNKNLHDPEAFRMLINLYARTSNLE 286
Query: 541 EVNRVWQSLKSAFPKTSNLSYLTMLQTLSRLEYMGGLKRCFDEWELHCSSYDIRLANVLI 720
VNR W+SLK A PK +N SYL ML LS+L + GL++CF EWE CS+YD+RL+NV++
Sbjct: 287 GVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEWESGCSTYDVRLSNVML 346
Query: 721 KAYLKRNMTEEANLLLSHLLEKRYELNFRTYALFTEFYLMTHSMDLALKFMGLGTPYLRK 900
++YL R M EEANLL + ++ EL +T LF +FYL H +DLA+K++ +G
Sbjct: 347 ESYLNREMIEEANLLSESIAKRGPELKLKTLDLFMKFYLKKHQLDLAMKYLDMGASKADP 406
Query: 901 SEREMY--KKKVHEFLKYFEEERDVCGAKELC 990
+ + ++ + FL+YFEE +DV A++ C
Sbjct: 407 ENNKWFPTEETITMFLEYFEEVKDVDSAEKFC 438
>ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial [Vitis vinifera]
gi|296089781|emb|CBI39600.3| unnamed protein product
[Vitis vinifera]
Length = 498
Score = 304 bits (779), Expect = 2e-80
Identities = 153/332 (46%), Positives = 227/332 (68%), Gaps = 3/332 (0%)
Frame = +1
Query: 4 KSRGVEAAEKYFTDLPNSAKNKSTYGALLHCFCCEEMTEKAMMLFGKMKELNFPINSFDY 183
K+ G+ AE YF L SAK TYGALL+C+C E M +KA+ LF K+KELNF ++ Y
Sbjct: 112 KTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMLDKAVELFKKLKELNFVSSALSY 171
Query: 184 CSLMSLHLRLGQPEKVPLLHEEIKQKGIKPHLFHYKLLINSYASLKDVKSVEGVMEEIKM 363
+++SL+LR+GQPEKVP L E+++K I L+ Y LL+NSYAS+KD ++VE V++++K
Sbjct: 172 NNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSYASVKDFEAVEQVLDKMKK 231
Query: 364 IKGITPDWAFYSNVAAIYVAAGYHEKAELTLKEIEISK-LNDPKAFHFLLSIYASMGKVE 540
+G+ DW Y N+A IYV AG+ +KA L+++E +K L+DP+AF L+++YA +E
Sbjct: 232 -RGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQNKNLHDPEAFRMLINLYARTSNLE 290
Query: 541 EVNRVWQSLKSAFPKTSNLSYLTMLQTLSRLEYMGGLKRCFDEWELHCSSYDIRLANVLI 720
VNR W+SLK A PK +N SYL ML LS+L + GL++CF EWE CS+YD+RL+NV++
Sbjct: 291 GVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEWESGCSTYDVRLSNVML 350
Query: 721 KAYLKRNMTEEANLLLSHLLEKRYELNFRTYALFTEFYLMTHSMDLALKFMGLGTPYLRK 900
++YL R + EEANLL + ++ EL +T LF +FYL H +DLA+K++ +G
Sbjct: 351 ESYLNREIIEEANLLSESIAKRGPELKLKTLDLFMKFYLKKHQLDLAMKYLDMGASKADP 410
Query: 901 SEREMY--KKKVHEFLKYFEEERDVCGAKELC 990
+ + ++ + FL+YFEE +DV A++ C
Sbjct: 411 ENNKWFPTEETITMFLEYFEEVKDVDSAEKFC 442
>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 298 bits (763), Expect = 1e-78
Identities = 153/330 (46%), Positives = 217/330 (65%), Gaps = 1/330 (0%)
Frame = +1
Query: 4 KSRGVEAAEKYFTDLPNSAKNKSTYGALLHCFCCEEMTEKAMMLFGKMKELNFPINSFDY 183
K++G+ AE+YF +L SAKN TYG LL+C+C E+M EKA+ LF KM ELNF S +
Sbjct: 123 KTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSLTF 182
Query: 184 CSLMSLHLRLGQPEKVPLLHEEIKQKGIKPHLFHYKLLINSYASLKDVKSVEGVMEEIKM 363
+LMSLH+RLG+PE VP L +E+K++ I P F Y +L+ SYA L D++ E V+EEIK
Sbjct: 183 NNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEIKR 242
Query: 364 IKGITPDWAFYSNVAAIYVAAGYHEKAELTLKEIEISK-LNDPKAFHFLLSIYASMGKVE 540
W YSN+AA+YV A EKAEL LK++E +D A+HFL+S+YA + +
Sbjct: 243 ENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAYHFLISLYAGINNLS 302
Query: 541 EVNRVWQSLKSAFPKTSNLSYLTMLQTLSRLEYMGGLKRCFDEWELHCSSYDIRLANVLI 720
EVNRVW SLKSAFPKT+N+SY MLQ L+ L + GLK CF+EW+ C S+D+RLANV +
Sbjct: 303 EVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVRLANVAV 362
Query: 721 KAYLKRNMTEEANLLLSHLLEKRYELNFRTYALFTEFYLMTHSMDLALKFMGLGTPYLRK 900
+A+L +M ++A +L +++ + +F +L +D ALK+M ++
Sbjct: 363 RAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVREIDTALKYMEAAASEVKN 422
Query: 901 SEREMYKKKVHEFLKYFEEERDVCGAKELC 990
+E + ++V FLKYFEEE+DV GA++ C
Sbjct: 423 NEWQPAPERVLAFLKYFEEEKDVEGAEKFC 452
>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 298 bits (763), Expect = 1e-78
Identities = 153/330 (46%), Positives = 217/330 (65%), Gaps = 1/330 (0%)
Frame = +1
Query: 4 KSRGVEAAEKYFTDLPNSAKNKSTYGALLHCFCCEEMTEKAMMLFGKMKELNFPINSFDY 183
K++G+ AE+YF +L SAKN TYG LL+C+C E+M EKA+ LF KM ELNF S +
Sbjct: 162 KTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSLTF 221
Query: 184 CSLMSLHLRLGQPEKVPLLHEEIKQKGIKPHLFHYKLLINSYASLKDVKSVEGVMEEIKM 363
+LMSLH+RLG+PE VP L +E+K++ I P F Y +L+ SYA L D++ E V+EEIK
Sbjct: 222 NNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEIKR 281
Query: 364 IKGITPDWAFYSNVAAIYVAAGYHEKAELTLKEIEISK-LNDPKAFHFLLSIYASMGKVE 540
W YSN+AA+YV A EKAEL LK++E +D A+HFL+S+YA + +
Sbjct: 282 ENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAYHFLISLYAGINNLS 341
Query: 541 EVNRVWQSLKSAFPKTSNLSYLTMLQTLSRLEYMGGLKRCFDEWELHCSSYDIRLANVLI 720
EVNRVW SLKSAFPKT+N+SY MLQ L+ L + GLK CF+EW+ C S+D+RLANV +
Sbjct: 342 EVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVRLANVAV 401
Query: 721 KAYLKRNMTEEANLLLSHLLEKRYELNFRTYALFTEFYLMTHSMDLALKFMGLGTPYLRK 900
+A+L +M ++A +L +++ + +F +L +D ALK+M ++
Sbjct: 402 RAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVREIDTALKYMEAAASEVKN 461
Query: 901 SEREMYKKKVHEFLKYFEEERDVCGAKELC 990
+E + ++V FLKYFEEE+DV GA++ C
Sbjct: 462 NEWQPAPERVLAFLKYFEEEKDVEGAEKFC 491
>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
predicted protein [Populus trichocarpa]
Length = 473
Score = 290 bits (742), Expect = 4e-76
Identities = 154/330 (46%), Positives = 212/330 (64%), Gaps = 1/330 (0%)
Frame = +1
Query: 4 KSRGVEAAEKYFTDLPNSAKNKSTYGALLHCFCCEEMTEKAMMLFGKMKELNFPINSFDY 183
K G+ AAE YF L S +N ST+GALL C+C E M+EKA+ LF KM ++ F + S +
Sbjct: 89 KKEGIAAAENYFDGLSPSEQNHSTHGALLSCYCRELMSEKALTLFEKMDKMKFLLTSLPF 148
Query: 184 CSLMSLHLRLGQPEKVPLLHEEIKQKGIKPHLFHYKLLINSYASLKDVKSVEGVMEEIKM 363
+L+SLHLRL QPEKV + +E+KQKG+ P F Y + + SY L D + VE V++E+KM
Sbjct: 149 NNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYNMWMQSYGCLNDFEGVERVLDEMKM 208
Query: 364 IKGITPDWAFYSNVAAIYVAAGYHEKAELTLKEIEISKLNDPK-AFHFLLSIYASMGKVE 540
W Y+N+A IYV AG+ +KAE LK++E D + A+HFL+++YA +
Sbjct: 209 DGQKNFSWTTYTNLATIYVKAGHFDKAESALKKVEEQIERDYREAYHFLITLYAGTSNLG 268
Query: 541 EVNRVWQSLKSAFPKTSNLSYLTMLQTLSRLEYMGGLKRCFDEWELHCSSYDIRLANVLI 720
EVNRVW SLKS F T+N+SYLTML TL++L+ + GL +CF EWE C SYD+RLANV I
Sbjct: 269 EVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKCFKEWESSCHSYDMRLANVAI 328
Query: 721 KAYLKRNMTEEANLLLSHLLEKRYELNFRTYALFTEFYLMTHSMDLALKFMGLGTPYLRK 900
+A L+ +M EEA L+ L++ L F +F F+L H +DLALK M +++
Sbjct: 329 RACLEHDMYEEAALIFDDALKRTEGLFFNAREMFMVFFLKNHQLDLALKHMKAAFSEVKE 388
Query: 901 SEREMYKKKVHEFLKYFEEERDVCGAKELC 990
E + K V F YFE+E+DV GA+ LC
Sbjct: 389 IEWQPEPKTVSAFFAYFEDEKDVNGAERLC 418