BLASTX nr result

ID: Coptis25_contig00010927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010927
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304537.1| cation proton exchanger [Populus trichocarpa...   169   2e-40
ref|XP_002509895.1| Na(+)/H(+) antiporter, putative [Ricinus com...   161   5e-38
emb|CBI34426.3| unnamed protein product [Vitis vinifera]              161   6e-38
ref|XP_002276249.1| PREDICTED: cation/H(+) antiporter 18 [Vitis ...   161   6e-38
emb|CAN81240.1| hypothetical protein VITISV_031075 [Vitis vinifera]   161   6e-38

>ref|XP_002304537.1| cation proton exchanger [Populus trichocarpa]
           gi|222841969|gb|EEE79516.1| cation proton exchanger
           [Populus trichocarpa]
          Length = 806

 Score =  169 bits (428), Expect = 2e-40
 Identities = 87/126 (69%), Positives = 98/126 (77%)
 Frame = -3

Query: 378 VPFALGMGDSFGLRKTISKGVDQAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMA 199
           +PF LG+G SF LR TISKG D+APFLVFMGVALSITAFPVLARILAELKLLTTDVGRMA
Sbjct: 138 LPFLLGIGTSFALRGTISKGADKAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMA 197

Query: 198 MSAAAVNDVVXXXXXXXXXXLSGSGRSPAISVYVLIAGSVFVAVAIFLLRPIFSWMAKRC 19
           MSAAAVNDV           LSG+G S  +S++V + GS FV   +F++ PIF WMA RC
Sbjct: 198 MSAAAVNDVAAWILLALAIALSGTGHSALVSLWVFLCGSGFVLCCVFIIPPIFKWMANRC 257

Query: 18  PEGEPV 1
           PEGEPV
Sbjct: 258 PEGEPV 263


>ref|XP_002509895.1| Na(+)/H(+) antiporter, putative [Ricinus communis]
           gi|223549794|gb|EEF51282.1| Na(+)/H(+) antiporter,
           putative [Ricinus communis]
          Length = 805

 Score =  161 bits (408), Expect = 5e-38
 Identities = 83/126 (65%), Positives = 96/126 (76%)
 Frame = -3

Query: 378 VPFALGMGDSFGLRKTISKGVDQAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMA 199
           +PF +G+G SF LR TIS GV +AP LVFMGVALSITAFPVLARILAELKLLTTDVGRMA
Sbjct: 136 LPFVMGIGVSFVLRNTISPGVKEAPLLVFMGVALSITAFPVLARILAELKLLTTDVGRMA 195

Query: 198 MSAAAVNDVVXXXXXXXXXXLSGSGRSPAISVYVLIAGSVFVAVAIFLLRPIFSWMAKRC 19
           MSAAAVND+           LSG+GRSP  S++VL+ G  F+   I ++ P+F WMA RC
Sbjct: 196 MSAAAVNDIAAWILLALAIALSGTGRSPLTSLWVLLTGCGFIICCILIVPPVFKWMAHRC 255

Query: 18  PEGEPV 1
           PEGEPV
Sbjct: 256 PEGEPV 261


>emb|CBI34426.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  161 bits (407), Expect = 6e-38
 Identities = 86/126 (68%), Positives = 96/126 (76%)
 Frame = -3

Query: 378 VPFALGMGDSFGLRKTISKGVDQAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMA 199
           +PFALG+G SF LR TISKGVD  PF+VFMGVALSITAFPVLARILAELKLLTTDVG+MA
Sbjct: 133 LPFALGVGTSFVLRATISKGVDAGPFVVFMGVALSITAFPVLARILAELKLLTTDVGQMA 192

Query: 198 MSAAAVNDVVXXXXXXXXXXLSGSGRSPAISVYVLIAGSVFVAVAIFLLRPIFSWMAKRC 19
           MSAAAVNDV           LSG+GRSP IS++V + G  FV     +   IF WMA+RC
Sbjct: 193 MSAAAVNDVAAWILLALAIALSGTGRSPIISLWVFLCGFGFVLCCSLIAPRIFRWMAQRC 252

Query: 18  PEGEPV 1
           PEGEPV
Sbjct: 253 PEGEPV 258


>ref|XP_002276249.1| PREDICTED: cation/H(+) antiporter 18 [Vitis vinifera]
          Length = 787

 Score =  161 bits (407), Expect = 6e-38
 Identities = 86/126 (68%), Positives = 96/126 (76%)
 Frame = -3

Query: 378 VPFALGMGDSFGLRKTISKGVDQAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMA 199
           +PFALG+G SF LR TISKGVD  PF+VFMGVALSITAFPVLARILAELKLLTTDVG+MA
Sbjct: 133 LPFALGVGTSFVLRATISKGVDAGPFVVFMGVALSITAFPVLARILAELKLLTTDVGQMA 192

Query: 198 MSAAAVNDVVXXXXXXXXXXLSGSGRSPAISVYVLIAGSVFVAVAIFLLRPIFSWMAKRC 19
           MSAAAVNDV           LSG+GRSP IS++V + G  FV     +   IF WMA+RC
Sbjct: 193 MSAAAVNDVAAWILLALAIALSGTGRSPIISLWVFLCGFGFVLCCSLIAPRIFRWMAQRC 252

Query: 18  PEGEPV 1
           PEGEPV
Sbjct: 253 PEGEPV 258


>emb|CAN81240.1| hypothetical protein VITISV_031075 [Vitis vinifera]
          Length = 787

 Score =  161 bits (407), Expect = 6e-38
 Identities = 86/126 (68%), Positives = 96/126 (76%)
 Frame = -3

Query: 378 VPFALGMGDSFGLRKTISKGVDQAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMA 199
           +PFALG+G SF LR TISKGVD  PF+VFMGVALSITAFPVLARILAELKLLTTDVG+MA
Sbjct: 133 LPFALGVGTSFVLRATISKGVDAGPFVVFMGVALSITAFPVLARILAELKLLTTDVGQMA 192

Query: 198 MSAAAVNDVVXXXXXXXXXXLSGSGRSPAISVYVLIAGSVFVAVAIFLLRPIFSWMAKRC 19
           MSAAAVNDV           LSG+GRSP IS++V + G  FV     +   IF WMA+RC
Sbjct: 193 MSAAAVNDVAAWILLALAIALSGTGRSPIISLWVFLCGFGFVLCCSLIAPRIFRWMAQRC 252

Query: 18  PEGEPV 1
           PEGEPV
Sbjct: 253 PEGEPV 258


Top