BLASTX nr result

ID: Coptis25_contig00010905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010905
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34813.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCA...    67   1e-09
ref|XP_002279636.1| PREDICTED: putative DNA-binding protein ESCA...    65   6e-09
ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08

>emb|CBI34813.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -3

Query: 459 LMSDSNAPLFQGLPPNLLNSCQLPTEAYWATGRSPY 352
           L++D NAPLF GLPPNLLNS QLP EAYWATGR PY
Sbjct: 205 LLADPNAPLFHGLPPNLLNSIQLPAEAYWATGRPPY 240


>ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis
           vinifera]
          Length = 302

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -3

Query: 459 LMSDSNAPLFQGLPPNLLNSCQLPTEAYWATGRSPY 352
           L++D NAPLF GLPPNLLNS QLP EAYWATGR PY
Sbjct: 267 LLADPNAPLFHGLPPNLLNSIQLPAEAYWATGRPPY 302


>ref|XP_002279636.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
           gi|147867329|emb|CAN81187.1| hypothetical protein
           VITISV_029906 [Vitis vinifera]
           gi|296089162|emb|CBI38865.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/36 (77%), Positives = 29/36 (80%)
 Frame = -3

Query: 459 LMSDSNAPLFQGLPPNLLNSCQLPTEAYWATGRSPY 352
           L+ D NA LFQGLPPNLLNSCQLP EAYW T R PY
Sbjct: 265 LLPDPNASLFQGLPPNLLNSCQLPAEAYWGTARPPY 300


>ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|222846842|gb|EEE84389.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = -3

Query: 459 LMSDSNAPLFQGLPPNLLNSCQLPTEAYWATGRSPY 352
           +M++ NA LF GLPPNLLNS QLP EAYWATGR PY
Sbjct: 267 VMAEQNAQLFHGLPPNLLNSIQLPAEAYWATGRPPY 302


>ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|222840972|gb|EEE78519.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = -3

Query: 459 LMSDSNAPLFQGLPPNLLNSCQLPTEAYWATGRSPY 352
           +M++ NA LF GLPPNLLNS QLP EAYWATGR PY
Sbjct: 268 VMAEQNAQLFHGLPPNLLNSIQLPAEAYWATGRPPY 303


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