BLASTX nr result

ID: Coptis25_contig00010901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010901
         (1310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273954.1| PREDICTED: UV radiation resistance-associate...   394   e-107
ref|XP_004139009.1| PREDICTED: UV radiation resistance-associate...   371   e-100
ref|XP_004162433.1| PREDICTED: LOW QUALITY PROTEIN: UV radiation...   365   1e-98
ref|XP_002518075.1| conserved hypothetical protein [Ricinus comm...   361   3e-97
ref|XP_002323989.1| predicted protein [Populus trichocarpa] gi|2...   348   2e-93

>ref|XP_002273954.1| PREDICTED: UV radiation resistance-associated gene protein [Vitis
            vinifera] gi|298205154|emb|CBI17213.3| unnamed protein
            product [Vitis vinifera]
          Length = 345

 Score =  394 bits (1011), Expect = e-107
 Identities = 208/338 (61%), Positives = 263/338 (77%), Gaps = 4/338 (1%)
 Frame = -3

Query: 1152 MDSTNLKVIEWEDYEQELARLCSLSSTLNKAKEKKIFLQQNLQSLIQVRSETLNRSNHLQ 973
            + S N+KVIEWED+EQELARL SLSS L +AKEKK  LQ+ L SL+QV++E+LNRSN L+
Sbjct: 7    LSSENVKVIEWEDFEQELARLWSLSSALKEAKEKKDSLQEKLNSLLQVKAESLNRSNELE 66

Query: 972  DLRLKLEGRSFILGNLLMRSKNDAEDLRNRRERLNVQIKTLLVAGKALSLAYHHLEEANR 793
            +++ +L+ R F+ G++ M+SK   ED++ + ERL +++++LLVAG ALS++ + L++ANR
Sbjct: 67   EMQQRLDDRKFVTGDMSMQSKIVEEDIKKKEERLGLEVRSLLVAGTALSVSRNRLQDANR 126

Query: 792  LLAGERGHARLKALHKFLRMRLQYMVAQVSTLYPVKGTSGPI--HAENFNSAS-TDNSAG 622
            LL+GERG+  LK L K LR+R Q+M++QVS LYPVK + G +    E+F S+S   N+ G
Sbjct: 127  LLSGERGYVHLKNLEKMLRVRQQHMISQVSFLYPVKPSIGSLEQELESFPSSSRAGNAVG 186

Query: 621  SKHVSPRSLAISGLELTALPVKKMSFFTDKKEIQRSATALGYIAHVVLLIGSYLDAPLRY 442
            SK ++  SL ISGL+L  L +KKMSFFTDKKE+QRSATALGY+AH V LI SYL+ PLRY
Sbjct: 187  SKPLNEGSLTISGLQLNMLAIKKMSFFTDKKEVQRSATALGYVAHAVSLIASYLEVPLRY 246

Query: 441  PLRMGGSRSYINDYA-XXXXXXXXXXSNPILFTNFKATEFPLFLDGQDTTRAAYAIFLLN 265
            PLR+GGSRSYINDYA           SN +L TN K  EFPLFL+GQDTTRAAYA+FLLN
Sbjct: 247  PLRLGGSRSYINDYAPSIEPTPTDSVSNSLLLTNLKHIEFPLFLEGQDTTRAAYAVFLLN 306

Query: 264  KDLEQLLNFIGAQSLGPRHVLANLKELFRTIQSREFND 151
            KDLEQLLNFIG +SLGPRHVLANLKEL RTI S EF D
Sbjct: 307  KDLEQLLNFIGVKSLGPRHVLANLKELLRTILSPEFID 344


>ref|XP_004139009.1| PREDICTED: UV radiation resistance-associated gene protein-like
            [Cucumis sativus]
          Length = 359

 Score =  371 bits (953), Expect = e-100
 Identities = 204/338 (60%), Positives = 250/338 (73%), Gaps = 5/338 (1%)
 Frame = -3

Query: 1149 DSTNLKVIEWEDYEQELARLCSLSSTLNKAKEKKIFLQQNLQSLIQVRSETLNRSNHLQD 970
            D  N KVIEWED+EQELARL SLSS L +AK+ K  L+Q L SLIQV SE+++RSN L +
Sbjct: 21   DPENAKVIEWEDFEQELARLWSLSSALQEAKQHKESLKQKLDSLIQVDSESVSRSNELAE 80

Query: 969  LRLKLEGRSFILGNLLMRSKNDAEDLRNRRERLNVQIKTLLVAGKALSLAYHHLEEANRL 790
            +R KLE R  I+ N+ MRSK  +ED++ + E L++++++LLVAG ALS A   L+E+NRL
Sbjct: 81   MREKLEARKCIVENMGMRSKLVSEDVKKQEESLSIEVRSLLVAGTALSKARKRLQESNRL 140

Query: 789  LAGERGHARLKALHKFLRMRLQYMVAQVSTLYPVKGTSGPIH---AENFNSAS-TDNSAG 622
            L+GE G+ RLK+L K LR R Q+MV+QV+ LYPVK  +GP +    E+F S S   NS+G
Sbjct: 141  LSGEEGYDRLKSLQKMLRRRQQFMVSQVAFLYPVKILTGPANDQELESFPSTSRLGNSSG 200

Query: 621  SKHVSPRSLAISGLELTALPVKKMSFFTDKKEIQRSATALGYIAHVVLLIGSYLDAPLRY 442
            SK V+  SL I GL L  LP KKMSFF+DKKE QRSA+ALGY+AH V LI SYL  PLRY
Sbjct: 201  SKPVNHGSLTILGLSLNVLPFKKMSFFSDKKETQRSASALGYVAHAVSLISSYLKVPLRY 260

Query: 441  PLRMGGSRSYINDYAXXXXXXXXXXSNPIL-FTNFKATEFPLFLDGQDTTRAAYAIFLLN 265
            PLR+GGSRSY+ DYA           +     TN K  EFPLFLDGQDTTRAAYA+FLLN
Sbjct: 261  PLRLGGSRSYLCDYAPSIEPTSSVTLSTTQPSTNMKHVEFPLFLDGQDTTRAAYAVFLLN 320

Query: 264  KDLEQLLNFIGAQSLGPRHVLANLKELFRTIQSREFND 151
            KDLEQLLNFIG +SLGPRH+LANLKE+FR IQS ++ D
Sbjct: 321  KDLEQLLNFIGVKSLGPRHILANLKEIFRVIQSADYID 358


>ref|XP_004162433.1| PREDICTED: LOW QUALITY PROTEIN: UV radiation resistance-associated
            gene protein-like [Cucumis sativus]
          Length = 359

 Score =  365 bits (937), Expect = 1e-98
 Identities = 201/338 (59%), Positives = 248/338 (73%), Gaps = 5/338 (1%)
 Frame = -3

Query: 1149 DSTNLKVIEWEDYEQELARLCSLSSTLNKAKEKKIFLQQNLQSLIQVRSETLNRSNHLQD 970
            D  N KVIEWED+EQELARL SLSS L +AK+ K  L+Q L SLIQV SE+++RSN L +
Sbjct: 21   DPENAKVIEWEDFEQELARLWSLSSALQEAKQHKESLKQKLDSLIQVDSESVSRSNELAE 80

Query: 969  LRLKLEGRSFILGNLLMRSKNDAEDLRNRRERLNVQIKTLLVAGKALSLAYHHLEEANRL 790
            +R KLE R  I+ N+ MRSK  +ED++ + E L++++++LLVAG ALS A   L+E+NRL
Sbjct: 81   MREKLEARKCIVENMGMRSKLVSEDVKKQEESLSIEVRSLLVAGTALSKARKRLQESNRL 140

Query: 789  LAGERGHARLKALHKFLRMRLQYMVAQVSTLYPVKGTSGPIH---AENFNSAS-TDNSAG 622
            L+GE G+ RLK+L K LR R Q+MV+QV+ LYPVK  +GP +    E+F S S   NS+G
Sbjct: 141  LSGEEGYDRLKSLQKMLRRRQQFMVSQVAFLYPVKILTGPANDQELESFPSTSRLGNSSG 200

Query: 621  SKHVSPRSLAISGLELTALPVKKMSFFTDKKEIQRSATALGYIAHVVLLIGSYLDAPLRY 442
            SK V+  SL I GL L  LP  KMSFF+DKKE QRSA+ALGY+AH V LI SYL  PLRY
Sbjct: 201  SKPVNHGSLTILGLNLNVLPFXKMSFFSDKKETQRSASALGYVAHAVSLISSYLKVPLRY 260

Query: 441  PLRMGGSRSYINDYAXXXXXXXXXXSNPIL-FTNFKATEFPLFLDGQDTTRAAYAIFLLN 265
            PLR+GGSRSY+ DYA           +     TN K  E PLFLDGQDTTRAAYA+FLLN
Sbjct: 261  PLRLGGSRSYLCDYAPSIEPTSSVTLSTTQPSTNMKHVEXPLFLDGQDTTRAAYAVFLLN 320

Query: 264  KDLEQLLNFIGAQSLGPRHVLANLKELFRTIQSREFND 151
            +DLEQLLNFIG +SLGPRH+LANLKE+FR IQS ++ D
Sbjct: 321  RDLEQLLNFIGVKSLGPRHILANLKEIFRVIQSADYID 358


>ref|XP_002518075.1| conserved hypothetical protein [Ricinus communis]
            gi|223542671|gb|EEF44208.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 356

 Score =  361 bits (926), Expect = 3e-97
 Identities = 190/338 (56%), Positives = 248/338 (73%), Gaps = 5/338 (1%)
 Frame = -3

Query: 1149 DSTNLKVIEWEDYEQELARLCSLSSTLNKAKEKKIFLQQNLQSLIQVRSETLNRSNHLQD 970
            +S  +K+I+WEDYEQE ARL SLSS L +A+EKK+ L+Q L S IQV++E+L+R N L++
Sbjct: 18   ESEKVKLIQWEDYEQEAARLWSLSSALKEAEEKKLNLKQKLNSFIQVKAESLSRLNELEE 77

Query: 969  LRLKLEGRSFILGNLLMRSKNDAEDLRNRRERLNVQIKTLLVAGKALSLAYHHLEEANRL 790
            +R KLE +   + ++  R+K  AE+ +    RL++++++LLVAG ALS++   L+E+ R 
Sbjct: 78   MRQKLEAKELAIESISARTKVAAENAKKEENRLSMEVRSLLVAGTALSVSSKQLQESKRS 137

Query: 789  LAGERGHARLKALHKFLRMRLQYMVAQVSTLYPVKGTSGPIHAENF----NSASTDNSAG 622
            ++GERG+ RL+ L K LR+R QY ++QVS L+PVK ++GP   +      N++ + N  G
Sbjct: 138  VSGERGYGRLRNLQKMLRIRQQYTISQVSLLFPVKISAGPSEEQELESFPNTSKSGNYTG 197

Query: 621  SKHVSPRSLAISGLELTALPVKKMSFFTDKKEIQRSATALGYIAHVVLLIGSYLDAPLRY 442
            SK V+  SL I GL LT LP  K+SFFTDKKEIQ+SATALGY+AH V LI SYL+ PLRY
Sbjct: 198  SKPVNQGSLTILGLHLTMLPFTKISFFTDKKEIQKSATALGYVAHAVSLIASYLEVPLRY 257

Query: 441  PLRMGGSRSYINDYA-XXXXXXXXXXSNPILFTNFKATEFPLFLDGQDTTRAAYAIFLLN 265
            P+R+GGSRSYINDYA            +    TN K  EFPLFL+GQDTTRAAYA+FLLN
Sbjct: 258  PVRLGGSRSYINDYAPSAEPTLPELSLSASSSTNVKPVEFPLFLEGQDTTRAAYAVFLLN 317

Query: 264  KDLEQLLNFIGAQSLGPRHVLANLKELFRTIQSREFND 151
            KDLEQLLN+IG +SLGPRHVLANLKEL RTIQS EF D
Sbjct: 318  KDLEQLLNYIGIKSLGPRHVLANLKELIRTIQSAEFLD 355


>ref|XP_002323989.1| predicted protein [Populus trichocarpa] gi|222866991|gb|EEF04122.1|
            predicted protein [Populus trichocarpa]
          Length = 333

 Score =  348 bits (892), Expect = 2e-93
 Identities = 187/333 (56%), Positives = 240/333 (72%)
 Frame = -3

Query: 1149 DSTNLKVIEWEDYEQELARLCSLSSTLNKAKEKKIFLQQNLQSLIQVRSETLNRSNHLQD 970
            +S   K IEWEDYE E+ARL SLSS+LN++K+KK   +Q L+SLIQV+ E L+R N L++
Sbjct: 2    ESEKEKFIEWEDYEHEVARLWSLSSSLNESKQKKQNFEQKLRSLIQVKEEALSRLNKLEE 61

Query: 969  LRLKLEGRSFILGNLLMRSKNDAEDLRNRRERLNVQIKTLLVAGKALSLAYHHLEEANRL 790
            ++ ++E R  ++  +  +SK  AE+     ERL+ ++++LLVAG ALS+A   L+++ R 
Sbjct: 62   MKERVEARKLVIERIKGQSKVAAENSTKEEERLSSEVRSLLVAGTALSVASKQLQDSRRS 121

Query: 789  LAGERGHARLKALHKFLRMRLQYMVAQVSTLYPVKGTSGPIHAENFNSASTDNSAGSKHV 610
            LAGERG+ RL  L K LR+R Q+M++QVS LYP+K ++GP   +   S  + N  GSK V
Sbjct: 122  LAGERGYVRLTKLQKKLRLRQQFMISQVSLLYPIKISAGPSEEQELESFPSRNYVGSKPV 181

Query: 609  SPRSLAISGLELTALPVKKMSFFTDKKEIQRSATALGYIAHVVLLIGSYLDAPLRYPLRM 430
            +  SL I GL LT  P  KMSFFTDKKE+QRSA+ALG++AH V LI SYL+ PLRY LR+
Sbjct: 182  NQGSLTILGLHLTMAPFTKMSFFTDKKEVQRSASALGHVAHAVSLIASYLEVPLRYSLRL 241

Query: 429  GGSRSYINDYAXXXXXXXXXXSNPILFTNFKATEFPLFLDGQDTTRAAYAIFLLNKDLEQ 250
            GGS SYI D A          S+ +L  N K  EFPLFL+GQDTTRAAYA+FLLNKDLEQ
Sbjct: 242  GGSNSYIIDCA-PSVESSDLLSSTLLTANTKPVEFPLFLEGQDTTRAAYAVFLLNKDLEQ 300

Query: 249  LLNFIGAQSLGPRHVLANLKELFRTIQSREFND 151
            LLN+IG +SLGPRHVLANLKEL RTIQS EF D
Sbjct: 301  LLNYIGVRSLGPRHVLANLKELTRTIQSAEFLD 333


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