BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010888
         (1285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like...   147   6e-33
ref|XP_002523741.1| zinc finger protein, putative [Ricinus commu...   128   3e-27
ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp....   124   5e-26
ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thali...   120   8e-25
gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis ...   105   3e-20

>ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like [Vitis vinifera]
          Length = 244

 Score =  147 bits (371), Expect = 6e-33
 Identities = 89/213 (41%), Positives = 120/213 (56%), Gaps = 4/213 (1%)
 Frame = +1

Query: 487  FDTSMALTVLVILTALFFMGFFSVYLRRYGGDSPIEFXXXXXXXXXXXXXXXXXXXXXXX 666
            FD+SMALTV+V+LTALFFMGFFSVY+RR+  D+ +E                        
Sbjct: 52   FDSSMALTVIVLLTALFFMGFFSVYIRRFAEDNAVEMSRRRRHPNPPASSSSRSPTPSK- 110

Query: 667  XXXXXXXXXXXXGVDPMIVKSLPLFIYNDENVKEPLDCAVCLSEFEERESVKMVTCCGQV 846
                        G+D   V SLPLF Y+ +  KE LDC VCL++FE++++VK++  C  V
Sbjct: 111  ------------GLDASTVSSLPLFSYHGD-AKETLDCPVCLTQFEDKDTVKIIPYCRHV 157

Query: 847  FHPECIDRWLASHASCPLCRSTDLL----GLSTVMNKSEISSLTMNVVIEERSTVENGDT 1014
            FHP CID WL+SH SCP+CRST L     G  +V+ +      + +    ER T ++GDT
Sbjct: 158  FHPPCIDTWLSSHVSCPVCRSTQLFPAKDGRCSVVQEGSDEGGSQS---HERLTADDGDT 214

Query: 1015 SGEGQSDELWRMRRTGSWCSSFGDRVCLQRSLS 1113
              E +S     +RRT S CSS G+R  L R+ S
Sbjct: 215  YVEVES---LAVRRTTS-CSSLGERALLHRTSS 243


>ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis]
            gi|223537045|gb|EEF38681.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 254

 Score =  128 bits (322), Expect = 3e-27
 Identities = 81/223 (36%), Positives = 115/223 (51%), Gaps = 13/223 (5%)
 Frame = +1

Query: 487  FDTSMALTVLVILTALFFMGFFSVYLRRYGGDSPIEFXXXXXXXXXXXXXXXXXXXXXXX 666
            FD+SMALTVLV+L+ALFFMGFFS+Y+RR+  +   EF                       
Sbjct: 46   FDSSMALTVLVLLSALFFMGFFSIYIRRFSTEPASEFTSHHPGPGTPSNQRPSRVVGGSR 105

Query: 667  XXXXXXXXXXXXGVDPMIVKSLPLFIYNDENVKEPLDCAVCLSEFEERESVKMVTCCGQV 846
                        G+DP ++KSLP++ Y     K  ++CAVCL EFEE+E+VK +  C  +
Sbjct: 106  K-----------GLDPEVIKSLPVYSYYHGEAKYQIECAVCLGEFEEKETVKSIPYCKHM 154

Query: 847  FHPECIDRWLASHASCPLCRSTDLLGLSTVMNKSEISSLTMNVVIEERSTVENGDTSGE- 1023
            FH ECI+ WL  H +CP+CR T  L + +            + V+  R  V++G  S + 
Sbjct: 155  FHLECIETWLKLHVTCPVCRGTQFLEVKSRDGDGGDGGGGSDKVV--RIRVDDGGNSSQQ 212

Query: 1024 -------GQSD---ELWRM--RRTGSWCSSFGDRVCLQRSLSL 1116
                   G +D   EL  +   RTG+ CSS G+R+ L  + SL
Sbjct: 213  DQGRSMVGDADTGIELGTLGTGRTGN-CSSLGERILLSETSSL 254


>ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297326798|gb|EFH57218.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 234

 Score =  124 bits (311), Expect = 5e-26
 Identities = 75/217 (34%), Positives = 102/217 (47%)
 Frame = +1

Query: 466  PKRTLSNFDTSMALTVLVILTALFFMGFFSVYLRRYGGDSPIEFXXXXXXXXXXXXXXXX 645
            P    S  D+SMALT+ V+L ALFFMGFFSVY+  +  DS +E                 
Sbjct: 38   PPEPPSALDSSMALTIFVLLVALFFMGFFSVYIHHFVDDSTVEISSIPRTRSSRMSPRRL 97

Query: 646  XXXXXXXXXXXXXXXXXXXGVDPMIVKSLPLFIYNDENVKEPLDCAVCLSEFEERESVKM 825
                               G+D   V+SLP++ Y     +   DC +CLSEFEE E+VK+
Sbjct: 98   STSVVVSRPYSYRR-----GLDSQTVRSLPVYHYTKATKQRNEDCVICLSEFEEGETVKV 152

Query: 826  VTCCGQVFHPECIDRWLASHASCPLCRSTDLLGLSTVMNKSEISSLTMNVVIEERSTVEN 1005
            +  CG VFH +C+D WL+S+ +CPLCRS  L                 +  +  +   + 
Sbjct: 153  IPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFS---------------DKDLGMQEPPDQ 197

Query: 1006 GDTSGEGQSDELWRMRRTGSWCSSFGDRVCLQRSLSL 1116
            G +      D +    R  S CSS G R  L+RSLSL
Sbjct: 198  GSSEEHDTCDVVDPCVRRCSSCSSLGQRTGLERSLSL 234


>ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thaliana]
            gi|68565332|sp|Q9SJJ7.1|ATL57_ARATH RecName: Full=RING-H2
            finger protein ATL57 gi|4510422|gb|AAD21508.1| putative
            RING zinc finger protein [Arabidopsis thaliana]
            gi|26452105|dbj|BAC43142.1| putative RING finger protein
            [Arabidopsis thaliana] gi|28950793|gb|AAO63320.1|
            At2g27940 [Arabidopsis thaliana]
            gi|330252968|gb|AEC08062.1| RING-H2 finger protein ATL57
            [Arabidopsis thaliana]
          Length = 237

 Score =  120 bits (301), Expect = 8e-25
 Identities = 77/222 (34%), Positives = 105/222 (47%), Gaps = 5/222 (2%)
 Frame = +1

Query: 466  PKRTLSNFDTSMALTVLVILTALFFMGFFSVYLRRYGGDSPIEFXXXXXXXXXXXXXXXX 645
            P +  S  D++MALT+ ++L ALFFMGFFSVY R +   S                    
Sbjct: 39   PPQPPSALDSTMALTIFILLVALFFMGFFSVYFRHFADSSS---STVDISSMPRTRSSRM 95

Query: 646  XXXXXXXXXXXXXXXXXXXGVDPMIVKSLPLFIYNDENVKEPLDCAVCLSEFEERESVKM 825
                               G+D   V+SLP++ Y     +   DC +CLS+FEE E+VK+
Sbjct: 96   SPRRLSTSVVVSRPYSFRRGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKV 155

Query: 826  VTCCGQVFHPECIDRWLASHASCPLCRSTDL-----LGLSTVMNKSEISSLTMNVVIEER 990
            +  CG VFH +C+D WL+S+ +CPLCRS  L     LG+    ++            EE 
Sbjct: 156  IPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKDLGMQEPPDQDS---------AEEH 206

Query: 991  STVENGDTSGEGQSDELWRMRRTGSWCSSFGDRVCLQRSLSL 1116
             T +  DT           +RR  S CSS G R  L+RSLSL
Sbjct: 207  DTCDGVDTC----------VRRCSS-CSSLGQRTGLERSLSL 237


>gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo]
          Length = 379

 Score =  105 bits (261), Expect = 3e-20
 Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 4/186 (2%)
 Frame = +1

Query: 496  SMALTVLVILTALFFMGFFSVYLRRYGGDSPIEFXXXXXXXXXXXXXXXXXXXXXXXXXX 675
            SMA+ +++++ ALFFM FFSVY+R +  DSP                             
Sbjct: 46   SMAVIIVILIAALFFMAFFSVYIR-HCNDSPSN-------------------TVRPITAA 85

Query: 676  XXXXXXXXXGVDPMIVKSLPLFIYNDENV----KEPLDCAVCLSEFEERESVKMVTCCGQ 843
                     G+DP ++++ P  IY+D       K  L+CAVCL+EFE+ E+++++  C  
Sbjct: 86   AGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKSALECAVCLNEFEDDETLRLIPKCDH 145

Query: 844  VFHPECIDRWLASHASCPLCRSTDLLGLSTVMNKSEISSLTMNVVIEERSTVENGDTSGE 1023
            VFHPECID WLASH++CP+CR+      +  +++++ S+  +N      S  + GD   E
Sbjct: 146  VFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRADDSNAVVN------SDTDGGDI--E 197

Query: 1024 GQSDEL 1041
             QS+++
Sbjct: 198  AQSNDV 203