BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010886
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17596.3| unnamed protein product [Vitis vinifera]              142   6e-32
ref|XP_003631881.1| PREDICTED: 60S ribosomal protein L38-like [V...   138   9e-31
ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [G...   138   9e-31
ref|XP_002272538.1| PREDICTED: 60S ribosomal protein L38 isoform...   137   2e-30
gb|AFK42835.1| unknown [Lotus japonicus]                              137   2e-30

>emb|CBI17596.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score =  142 bits (357), Expect = 6e-32
 Identities = 71/80 (88%), Positives = 74/80 (92%)
 Frame = +3

Query: 36  SAAENSTSPGKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD 215
           +A+  S    KMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD
Sbjct: 48  AASSGSFRNSKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD 107

Query: 216 SEKADKLKQSLPPGLTVQDL 275
           SEKADKLKQSLPPGL+VQDL
Sbjct: 108 SEKADKLKQSLPPGLSVQDL 127


>ref|XP_003631881.1| PREDICTED: 60S ribosomal protein L38-like [Vitis vinifera]
           gi|449442271|ref|XP_004138905.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
           gi|449454586|ref|XP_004145035.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
           gi|449506284|ref|XP_004162704.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
          Length = 69

 Score =  138 bits (347), Expect = 9e-31
 Identities = 68/69 (98%), Positives = 69/69 (100%)
 Frame = +3

Query: 69  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 248
           MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 249 PPGLTVQDL 275
           PPGL+VQDL
Sbjct: 61  PPGLSVQDL 69


>ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [Glycine max]
          Length = 100

 Score =  138 bits (347), Expect = 9e-31
 Identities = 68/80 (85%), Positives = 73/80 (91%)
 Frame = +3

Query: 36  SAAENSTSPGKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD 215
           ++ E   +   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD
Sbjct: 21  ASEEGIAAKSTMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD 80

Query: 216 SEKADKLKQSLPPGLTVQDL 275
           SEKADKLKQSLPPGL+VQD+
Sbjct: 81  SEKADKLKQSLPPGLSVQDV 100


>ref|XP_002272538.1| PREDICTED: 60S ribosomal protein L38 isoform 2 [Vitis vinifera]
           gi|297743847|emb|CBI36730.3| unnamed protein product
           [Vitis vinifera]
          Length = 96

 Score =  137 bits (345), Expect = 2e-30
 Identities = 68/73 (93%), Positives = 70/73 (95%)
 Frame = +3

Query: 57  SPGKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL 236
           SP   PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD+EKADKL
Sbjct: 24  SPKTPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDAEKADKL 83

Query: 237 KQSLPPGLTVQDL 275
           KQSLPPGL+VQDL
Sbjct: 84  KQSLPPGLSVQDL 96


>gb|AFK42835.1| unknown [Lotus japonicus]
          Length = 69

 Score =  137 bits (344), Expect = 2e-30
 Identities = 67/69 (97%), Positives = 69/69 (100%)
 Frame = +3

Query: 69  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 248
           MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD+EKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDTEKADKLKQSL 60

Query: 249 PPGLTVQDL 275
           PPGL+VQDL
Sbjct: 61  PPGLSVQDL 69