BLASTX nr result

ID: Coptis25_contig00010873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010873
         (2079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282069.1| PREDICTED: uncharacterized protein LOC100247...   369   2e-99
emb|CAN83005.1| hypothetical protein VITISV_003699 [Vitis vinifera]   363   1e-97
ref|XP_002315586.1| predicted protein [Populus trichocarpa] gi|2...   329   2e-87
ref|XP_002528361.1| conserved hypothetical protein [Ricinus comm...   320   9e-85
ref|XP_002312600.1| predicted protein [Populus trichocarpa] gi|2...   320   9e-85

>ref|XP_002282069.1| PREDICTED: uncharacterized protein LOC100247804 [Vitis vinifera]
            gi|296083723|emb|CBI23712.3| unnamed protein product
            [Vitis vinifera]
          Length = 642

 Score =  369 bits (946), Expect = 2e-99
 Identities = 220/569 (38%), Positives = 311/569 (54%), Gaps = 15/569 (2%)
 Frame = +1

Query: 223  HVTDHRIPKYLRFVNLDEKFLQHCLDLVEFRAANSLSMICSPAVPCNVAVNLRSSKQVFY 402
            H  ++R+PK++  ++LDE++L+ CL+L+   A        S A PCN+++NL S K   +
Sbjct: 83   HGLNNRMPKHI--MSLDERYLRRCLELIHISA--------SKAAPCNISLNLSSLKMGIF 132

Query: 403  DNHLEPHRNMRRNRSDLGNFVVHCPSATRSG--------QWILKTVDENKCGKNVLNDSL 558
             + L   +   RN  D+   V+ CP AT +G        QW++ T+  +K    +L   L
Sbjct: 133  SDTLNLPKFRGRNTCDMSKLVIECPVATGTGDVVVSPAGQWVVGTLMGSKSMMKILKSPL 192

Query: 559  LRHLGAL-GSIVMRRVGLIDVKGTKDSGFMSFPSRPSLRSLQKPETGTAYVENPRSGSKS 735
             R  GAL   +      LID KG   + F+S P   S+RS Q    G     N R G ++
Sbjct: 193  FRQFGALEDDVKFGGTSLIDAKGAMCTDFISSPGGLSIRSPQNLPKGNISQGNHRYGPEA 252

Query: 736  LNKHIFAISN-GVXXXXXXXXXXXXXXXQGTLQREWENGVPYFKYSVDDQRVVYVSKTVE 912
            ++K + + S+                  QG LQ  W+ G+P+F +SVDDQR VYV+   +
Sbjct: 253  VHKRLISTSSTNSTCSDQSPSSGFATVSQGMLQCTWKGGIPHFVFSVDDQREVYVANQWK 312

Query: 913  SEFSENMPLDCVYLFYKKKVGGKEKGTCDKSLDLAGKMNVTSSLTLCSDSDNSKVMETQC 1092
            +E  ++  LDC+YLF+ +  G KE    D   DL GKM V+SS TLC +  +SK+MET+ 
Sbjct: 313  AELPDDKALDCMYLFHSRTGGQKEHKIPDNKADLVGKMKVSSSFTLCPN--DSKIMETEF 370

Query: 1093 VLFGADAKEIGNIACSDHILGRTKVSVNKMVDVFRPKHLPKHNSCSQFGTESYVHEHFSW 1272
            V FG        +  S  I+ + K    K+V+VFR  H  K  + S+FG  + + E+ SW
Sbjct: 371  VFFGGRENYASKMQTSSSIIRKNKGLSKKVVEVFRTSHSSKQRTTSKFGGTTAILENDSW 430

Query: 1273 EA--DTSSNVGRLGAEIFQAG--PPNVELAAIVLREQTHDSHQATVVGGWGLKFLQKARV 1440
            E   DT +N   LG         PPN+ELAAIV+++      Q   VGGWGLKFL+K  +
Sbjct: 431  EQCQDTCNNPSALGRTNLLENDLPPNLELAAIVVKDHLPGKRQEAEVGGWGLKFLKKVGL 490

Query: 1441 GGANTXXXXXXXXXXXXXXRLRGMGDCSTSMNVIIPAGAHGGPRTRNGGPSSLTERWQSG 1620
               +                LR  GDCSTSM++++PAG HGGPRTRNGGPSSL ERW+SG
Sbjct: 491  KQNSASLEASLPSECC----LRSTGDCSTSMDILVPAGIHGGPRTRNGGPSSLIERWRSG 546

Query: 1621 GHCDCGGWDIGCPLTVLTSQPSKEIWT-NTNAEGEHNSLDLIIEGSRQGVPPSLEMVNVG 1797
            GHCDCGGWDIGCPLTVL ++ +KE ++ +T+ + E+ S DL  +GS     P L +VNV 
Sbjct: 547  GHCDCGGWDIGCPLTVLKTRATKEEFSHHTDIQEEYKSFDLFAQGSELSA-PILRVVNVH 605

Query: 1798 NGTYNIXXXXXXXXXXXXXVGVAIIHTQS 1884
            +G Y I             + VAIIHT+S
Sbjct: 606  DGLYFIHFRSMLSALQSFSIAVAIIHTRS 634


>emb|CAN83005.1| hypothetical protein VITISV_003699 [Vitis vinifera]
          Length = 597

 Score =  363 bits (932), Expect = 1e-97
 Identities = 218/564 (38%), Positives = 307/564 (54%), Gaps = 15/564 (2%)
 Frame = +1

Query: 238  RIPKYLRFVNLDEKFLQHCLDLVEFRAANSLSMICSPAVPCNVAVNLRSSKQVFYDNHLE 417
            R+PK++  ++LDE++L+ CL+L+   A        S A PCN+++NL S K   + + L 
Sbjct: 43   RMPKHI--MSLDERYLRRCLELIHISA--------SKAAPCNISLNLSSLKMGIFSDTLN 92

Query: 418  PHRNMRRNRSDLGNFVVHCPSATRSG--------QWILKTVDENKCGKNVLNDSLLRHLG 573
              +   RN  D+   V+ CP AT +G        QW++ T+  +K    +L   L R  G
Sbjct: 93   LPKFRGRNTCDMSKLVIECPVATGTGDVVVSPAGQWVVGTLMGSKSMMKILKSPLFRQFG 152

Query: 574  AL-GSIVMRRVGLIDVKGTKDSGFMSFPSRPSLRSLQKPETGTAYVENPRSGSKSLNKHI 750
            AL   +      LID KG   + F+S P   S+RS Q    G     N   G ++++K +
Sbjct: 153  ALEDDVKFGGTSLIDAKGAMCTDFISSPGGLSIRSPQNLPKGNISQGNHIYGPEAVHKRL 212

Query: 751  FAISN-GVXXXXXXXXXXXXXXXQGTLQREWENGVPYFKYSVDDQRVVYVSKTVESEFSE 927
             + S+                  QG LQ  W+ G+P+F +SVDDQR VYV+   ++E  +
Sbjct: 213  ISTSSTNSTCSDQSPSSGFATVSQGMLQCTWKGGIPHFVFSVDDQREVYVANQWKAELPD 272

Query: 928  NMPLDCVYLFYKKKVGGKEKGTCDKSLDLAGKMNVTSSLTLCSDSDNSKVMETQCVLFGA 1107
            +  LDC+YLF+ +  G KE    D   DL GKM V+SS TLC +  +SK+MET+ V FG 
Sbjct: 273  DKALDCMYLFHSRTGGQKEHKIPDNKADLVGKMKVSSSFTLCPN--DSKIMETEFVFFGG 330

Query: 1108 DAKEIGNIACSDHILGRTKVSVNKMVDVFRPKHLPKHNSCSQFGTESYVHEHFSWEA--D 1281
                   +  S  I+ + K    K+V+VFR  H  K  + S+FG  + + E+ SWE   D
Sbjct: 331  RENYASKMQTSSSIIRKNKGLSKKVVEVFRTSHSSKQRTTSKFGGTTAILENDSWEQCQD 390

Query: 1282 TSSNVGRLGAEIFQAG--PPNVELAAIVLREQTHDSHQATVVGGWGLKFLQKARVGGANT 1455
            T +N   LG         PPN+ELAAIV+++      Q   VGGWGLKFL+K  +   + 
Sbjct: 391  TCNNPSALGRTNLLENDLPPNLELAAIVVKDHLPGKRQEAEVGGWGLKFLKKVGLKQNSA 450

Query: 1456 XXXXXXXXXXXXXXRLRGMGDCSTSMNVIIPAGAHGGPRTRNGGPSSLTERWQSGGHCDC 1635
                           LR  GDCSTSM++++PAG HGGPRTRNGGPSSL ERW+SGGHCDC
Sbjct: 451  SLEASLPSECC----LRSTGDCSTSMDILVPAGIHGGPRTRNGGPSSLIERWRSGGHCDC 506

Query: 1636 GGWDIGCPLTVLTSQPSKEIWT-NTNAEGEHNSLDLIIEGSRQGVPPSLEMVNVGNGTYN 1812
            GGWDIGCPLTVL ++ +KE ++ +T+ + E+ S DL  +GS     P L +VNV +G Y 
Sbjct: 507  GGWDIGCPLTVLKTRATKEEFSHHTDIQEEYKSFDLFAQGSELSA-PILRVVNVHDGLYF 565

Query: 1813 IXXXXXXXXXXXXXVGVAIIHTQS 1884
            I             + VAIIHT+S
Sbjct: 566  IHFRSMLSALQSFSIAVAIIHTRS 589


>ref|XP_002315586.1| predicted protein [Populus trichocarpa] gi|222864626|gb|EEF01757.1|
            predicted protein [Populus trichocarpa]
          Length = 615

 Score =  329 bits (844), Expect = 2e-87
 Identities = 211/591 (35%), Positives = 308/591 (52%), Gaps = 14/591 (2%)
 Frame = +1

Query: 163  DSKQQLISKRCIQQSLLQSEHVTDHRIPKYLRFVNLDEKFLQHCLDLVEFRAANSLSMIC 342
            D KQ   SK CI+ S L+S HV D+ IPK++  + +DEK+L+ CL+ +            
Sbjct: 35   DFKQLQRSKSCIKDSFLRSIHVLDNWIPKHI--ITIDEKYLRRCLEFIHAST-------- 84

Query: 343  SPAVPCNVAVNLRSSKQVFYDNHLEPHRNMRRNRSDLGNFVVHCPSA-------TRSGQW 501
            S A PCN ++ L      F+ + L   +   +N      F   CP A       + + QW
Sbjct: 85   SQAAPCNASMYLDWGNMGFFSDGLNIAKIGNQNTCSSAGFDFDCPLAGTGSVVISPAEQW 144

Query: 502  ILKTVDENKCGKNVLNDSLLRHLGAL-GSIVMRRVGLIDVKGTKDSGFMSFPSRPSLRSL 678
            I  ++  +K   N+L   LLR  GA  G     +V   DVKG+    FM+ P   S  S 
Sbjct: 145  IAGSIMGSKSMVNILKSPLLRRYGAYDGDANFEKVTSSDVKGSICYDFMNSPGGLSSYSP 204

Query: 679  QKPETGTAYVENPRSGSKSLNKHIFAISN-GVXXXXXXXXXXXXXXXQGTLQREWENGVP 855
             K + G     + +  S+SL+K   ++S+                  QGTLQ  W+ G P
Sbjct: 205  HKLDNGAQTPGSHKYESESLHKRFVSMSSTNSTCSDQSSSSLPAAVTQGTLQCTWKGGNP 264

Query: 856  YFKYSVDDQRVVYVSKTVESEFSENMPLDCVYLFYKKKVGGKEKGTCDKSLDLAGKMNVT 1035
            +F +S+DDQ+VVYV+       +++  L+ VYLF+ +K G KE    DK   L G+MNV+
Sbjct: 265  HFIFSLDDQKVVYVANFYNVNSADDKALEYVYLFHSRKGGQKEHMIHDKESRLVGQMNVS 324

Query: 1036 SSLTLCSDSDNSKVMETQCVLFGADAKEIGNIACSDHILGRTKVSVNKMVDVFRPKHLPK 1215
            +S +LC +  N ++ME + VLFG     +G +  S H L + K   +++V+VFR  +  K
Sbjct: 325  TSFSLCPN--NCRIMEREFVLFGCYENLVGELQSSSHDLRKNKRLSSRVVEVFRTNNSFK 382

Query: 1216 HNSCSQFGTESYVHEHFSWEA--DTSSNVGRLGAEIFQAG--PPNVELAAIVLREQTHDS 1383
              + S+F     + E+ SWE   +   N+  LG         PPN+ELAAI+++    + 
Sbjct: 383  KRTNSRFDGSGAILENSSWEPFQEREYNMDALGGANLLENHLPPNLELAAILVKNHLPEK 442

Query: 1384 HQATVVGGWGLKFLQKARVGGANTXXXXXXXXXXXXXXRLRGMGDCSTSMNVIIPAGAHG 1563
                  GGWGL FL+   V  A                  R  GDCSTS++++IPAG HG
Sbjct: 443  RPEKT-GGWGLNFLKNTAVTQAKDTMKSSVLSASCA----RDTGDCSTSIDILIPAGLHG 497

Query: 1564 GPRTRNGGPSSLTERWQSGGHCDCGGWDIGCPLTVLTSQ-PSKEIWTNTNAEGEHNSLDL 1740
            GPRTRNGGPSSL +RW+SGG+CDCGGWD+GCPLTVL S+  +KE  ++ + +GE   ++L
Sbjct: 498  GPRTRNGGPSSLIDRWRSGGYCDCGGWDLGCPLTVLKSRSANKEFSSSADMQGECKLINL 557

Query: 1741 IIEGSRQGVPPSLEMVNVGNGTYNIXXXXXXXXXXXXXVGVAIIHTQSHSH 1893
             I+GS  G PP L MVNV +G Y++             + +A IH+Q   H
Sbjct: 558  FIQGSENGAPP-LRMVNVHDGMYSVHFQSTLSALQTFSIALAFIHSQKVPH 607


>ref|XP_002528361.1| conserved hypothetical protein [Ricinus communis]
            gi|223532229|gb|EEF34033.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 637

 Score =  320 bits (820), Expect = 9e-85
 Identities = 212/609 (34%), Positives = 315/609 (51%), Gaps = 15/609 (2%)
 Frame = +1

Query: 103  ASSKFKFLLGRIKAEKQLPSDSKQQLISKRCIQQSLLQSEHVTDHRIPKYLRFVNLDEKF 282
            + S+ K L+ R+ ++  L S  KQ   S+  I++S L+S  V D+ IPK++  V +DEK+
Sbjct: 38   SESRSKRLVRRVNSQNTLVSKFKQLQRSRSYIKESFLRSIRVLDNWIPKHM--VTVDEKY 95

Query: 283  LQHCLDLVEFRAANSLSMICSPAVPCNVAVNLRSSKQVFYDNHLEPHRNMRRNRSDLGNF 462
            L+ CL+++            S  VP ++++NL   +     + L P +    N  D   F
Sbjct: 96   LRRCLEIIHVST--------SKEVPRDLSLNLGWGEMGVLSDGLSPAKIGSENTCDFTRF 147

Query: 463  VVHCPSATR--------SGQWILKTVDENKCGKNVLNDSLLRHLGAL-GSIVMRRVGLID 615
               CP A+         +G WI+ ++  +K   N+LN  L R  GA  G     +V   D
Sbjct: 148  HFDCPLASGDGSVVISPAGHWIVGSIMGSKSMVNILNSPLFRKYGAYDGDANFEKVSFSD 207

Query: 616  VKGTKDSGFMSFPSRPSLRSLQKPETGTAYVENPRSGSKSLNKHIFAISN-GVXXXXXXX 792
            V G+    FM+ PS     S  K    T      R  S++LN+   ++S+          
Sbjct: 208  VDGSICYNFMNSPSVLGSYSSNKLYKETPIPGKQRYRSETLNERPVSMSSTNSTCSDQSS 267

Query: 793  XXXXXXXXQGTLQREWENGVPYFKYSVDDQRVVYVSKTVESEFSENMPLDCVYLFYKKKV 972
                    QG LQ  WE+G P+F +S+DDQ+VVYV+    S+ ++++ +D  YLF+ +K 
Sbjct: 268  SSLSGTVSQGMLQCTWEDGNPHFVFSLDDQKVVYVANLWNSQLADDIVVDYTYLFHLRKG 327

Query: 973  GGKEKGTCDKSLDLAGKMNVTSSLTLCSDSDNSKVMETQCVLFGADAKEIGNIACSDHIL 1152
              KE    D    L GKM V++S +LC +  NSK+ME + +LFG++ + +  +  S H L
Sbjct: 328  DQKESEIHDTESHLVGKMKVSTSFSLCQN--NSKIMEREFILFGSN-ENVKRMQTSSHDL 384

Query: 1153 GRTKVSVNKMVDVFRPKHLPKHNSCSQFGTESYVHEHFSWEA--DTSSNV-GRLGAEIFQ 1323
             + K    K+ +VFR  H  K  + S+    S + E  SWE   DT +N+    G  + +
Sbjct: 385  RKNKGLSKKVAEVFRTSHSMKKRTISRLTGSSAILESCSWEPLQDTENNIDAHSGVNLLE 444

Query: 1324 AG-PPNVELAAIVLREQTHDSHQATVVGGWGLKFLQKARVGGANTXXXXXXXXXXXXXXR 1500
               PPN+E+AAIV++E   +  +    GGWGL FL+K+                      
Sbjct: 445  KHLPPNLEMAAIVVKEHIPEKRREKG-GGWGLNFLKKSSAKQTTDLMESSQHYGSCA--- 500

Query: 1501 LRGMGDCSTSMNVIIPAGAHGGPRTRNGGPSSLTERWQSGGHCDCGGWDIGCPLTVLTSQ 1680
             R  GDCSTS++++IP   HGGPRTRNGGPS LTERW+SGG CDCGGWD+GCPLTVL S+
Sbjct: 501  -RNTGDCSTSIDILIPVSLHGGPRTRNGGPSGLTERWKSGGCCDCGGWDLGCPLTVLKSR 559

Query: 1681 PS-KEIWTNTNAEGEHNSLDLIIEGSRQGVPPSLEMVNVGNGTYNIXXXXXXXXXXXXXV 1857
             S KE+    + +GE   +DLI +GS     P + MVNV +G Y +             +
Sbjct: 560  LSNKELSPQADMQGECKLIDLITQGSENSA-PQMRMVNVHDGLYFVHFQSTLSALQSFSI 618

Query: 1858 GVAIIHTQS 1884
             VA IH+QS
Sbjct: 619  AVAFIHSQS 627


>ref|XP_002312600.1| predicted protein [Populus trichocarpa] gi|222852420|gb|EEE89967.1|
            predicted protein [Populus trichocarpa]
          Length = 607

 Score =  320 bits (820), Expect = 9e-85
 Identities = 204/585 (34%), Positives = 302/585 (51%), Gaps = 14/585 (2%)
 Frame = +1

Query: 169  KQQLISKRCIQQSLLQSEHVTDHRIPKYLRFVNLDEKFLQHCLDLVEFRAANSLSMICSP 348
            KQ   SK CI+ S L+  HV D+ IPK++    +DEK+L+ CL+ +    + S       
Sbjct: 31   KQLQRSKSCIKDSFLRGIHVLDNWIPKHI--TTIDEKYLRRCLEFIHASTSQS------- 81

Query: 349  AVPCNVAVNLRSSKQVFYDNHLEPHRNMRRNRSDLGNFVVHCPSA-------TRSGQWIL 507
              PCN +++L      F+ + L   +    N   L  F   CP A       + + QWI+
Sbjct: 82   -APCNASMHLDWGNMGFFSDGLNIAKTGSENTYGLARFDFDCPLAGTGNVVISPAEQWIV 140

Query: 508  KTVDENKCGKNVLNDSLLRHLGAL-GSIVMRRVGLIDVKGTKDSGFMSFPSRPSLRSLQK 684
             ++  +K   N+L   LL   G+  G     +V   +VKG      M+ PS     S  K
Sbjct: 141  GSIMGSKSMVNILKSPLLLRYGSYDGDANFEKVSSSEVKGPICFNLMNSPSGLRSYSPHK 200

Query: 685  PETGTAYVENPRSGSKSLNKHIFAISNG-VXXXXXXXXXXXXXXXQGTLQREWENGVPYF 861
             +       + + GS++L+K + ++S+                  QGTLQ  W+ G P+F
Sbjct: 201  LDKEAQIPGSHKFGSETLHKRLISMSSSNSTCSDQSSSSPSASVTQGTLQCTWKGGNPHF 260

Query: 862  KYSVDDQRVVYVSKTVESEFSENMPLDCVYLFYKKKVGGKEKGTCDKSLDLAGKMNVTSS 1041
             +S+D+Q++VYV+     + +++  L+ VYLF+ +K   KE    DK   L GKM V++S
Sbjct: 261  VFSIDNQKLVYVANLYNVDSADDKALEYVYLFHSRKGSQKEHMNHDKESHLVGKMKVSTS 320

Query: 1042 LTLCSDSDNSKVMETQCVLFGADAKEIGNIACSDHILGRTKVSVNKMVDVFRPKHLPKHN 1221
              LC    NS++ + + VLFG +   +G    S H L + K   +++ +VFR  +  K  
Sbjct: 321  FALCPK--NSRITQREFVLFGYE-NYVGEWQSSSHDLRKNKGLSSRVAEVFRTSNSSKRR 377

Query: 1222 SCSQFGTESYVHEHFSWEA--DTSSNVGRLGAEIFQAG--PPNVELAAIVLREQTHDSHQ 1389
            + S+FG    + E+ SWE   +  +N+  LG         PPN+ELAAI++++   +  Q
Sbjct: 378  TNSRFGGSGAILENSSWEPFQERDNNIDALGGTNLLENHLPPNLELAAILVKDHLPEKRQ 437

Query: 1390 ATVVGGWGLKFLQKARVGGANTXXXXXXXXXXXXXXRLRGMGDCSTSMNVIIPAGAHGGP 1569
                GGWGL FL+K  V  A                  +  GDCSTS++++IPAG HGGP
Sbjct: 438  EKA-GGWGLNFLKKMAVTQAEDVKSSVLPACCA-----QDSGDCSTSIDILIPAGLHGGP 491

Query: 1570 RTRNGGPSSLTERWQSGGHCDCGGWDIGCPLTVLTSQPS-KEIWTNTNAEGEHNSLDLII 1746
            RTRNGGPSSL +RW SGGHCDCGGWD+GCPLTVL S+ + KE  +  + +GE   +DL I
Sbjct: 492  RTRNGGPSSLIDRWISGGHCDCGGWDLGCPLTVLKSRSAHKEFSSQADTQGECKLVDLFI 551

Query: 1747 EGSRQGVPPSLEMVNVGNGTYNIXXXXXXXXXXXXXVGVAIIHTQ 1881
            EGS  G PP + MVNV +G Y +             + VA IHTQ
Sbjct: 552  EGSENGAPP-MSMVNVHDGLYFVHFQSTLSALQSFSIAVAFIHTQ 595


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