BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010869
         (1849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           310   6e-82
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         300   1e-78
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]            292   2e-76
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]      276   1e-71
emb|CAN77763.1| hypothetical protein VITISV_026761 [Vitis vinifera]   275   2e-71

>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  310 bits (795), Expect = 6e-82
 Identities = 157/270 (58%), Positives = 192/270 (71%)
 Frame = +3

Query: 384  THELVEKPQGRKILKNKWIYKVKHEENNPHLRHKARLVVKGFGQRKKIDFDEIFSPVVKM 563
            T ELV+ P+G++ LKNKW++K+KH+E+N   R KARLVVKGF QRK IDFDEIFSPVVKM
Sbjct: 843  TFELVKLPKGKRALKNKWVFKMKHDEHNSLPRFKARLVVKGFNQRKGIDFDEIFSPVVKM 902

Query: 564  TSIRVVLGMTASMNLEIEQLDVKTVFLHGDLEEDVYMDQPEEFEVKGKEHLVCKLIKRLY 743
            TSIR VLG+ AS+NLE+EQ+DVKT FLHGDLEE++YM+QP+ F+ KGKE  VC+L K LY
Sbjct: 903  TSIRTVLGLAASLNLEVEQMDVKTAFLHGDLEEEIYMEQPDGFQQKGKEDYVCRLRKSLY 962

Query: 744  GLKQAPRQWYIKFGSFMAKQEYKKSVSDHCVFLQRFSDGDFIVLLLYVDDMLIIGPNINK 923
            GLKQAPRQWY KF S M +  YKK+ SDHCVF Q+FSD DFI+LLLYVDDMLI+G N+++
Sbjct: 963  GLKQAPRQWYKKFESVMGQHGYKKTTSDHCVFAQKFSDDDFIILLLYVDDMLIVGRNVSR 1022

Query: 924  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKQILGMWITRDRKGGKLWLS* 1103
                                                  AKQILGM I RDR+  KLWLS 
Sbjct: 1023 -------------------INSLKEQLSKFFAMKDLGPAKQILGMRIMRDREAKKLWLSQ 1063

Query: 1104 KSYIEKVLKKFNMDQAKPVSCTLGGQFRIT 1193
            + YIEKVL++FNM++ K VSC L   FR++
Sbjct: 1064 EKYIEKVLQRFNMEKTKAVSCPLANHFRLS 1093



 Score =  130 bits (326), Expect(2) = 1e-58
 Identities = 67/99 (67%), Positives = 77/99 (77%), Gaps = 4/99 (4%)
 Frame = +1

Query: 1564 YTDADIAADVDLMKSTSGYLVTFARGAVS*QSKL*KCVALSTTEAEYITV----KELLWM 1731
            YTDAD+A DVD  KSTSGYL+ F+ GAVS QSKL KCVALSTTEAE+I      KEL+WM
Sbjct: 1179 YTDADMAGDVDSRKSTSGYLINFSGGAVSWQSKLQKCVALSTTEAEFIAATEACKELIWM 1238

Query: 1732 KRFYDELGLKQKQFVVLCDSQSAIHLSKNPSFYSRSKHI 1848
            K+F  ELG  Q  + + CDSQSAIHL+KN SF+SRSKHI
Sbjct: 1239 KKFLTELGFSQDGYQLFCDSQSAIHLAKNASFHSRSKHI 1277



 Score =  125 bits (314), Expect(2) = 1e-58
 Identities = 58/73 (79%), Positives = 62/73 (84%)
 Frame = +2

Query: 1346 MEKILYAFAVGSLMYAMVCTRPDIAFTIGVVSRFLSNPGKEHWKGVKWILRYLKGTSKSC 1525
            ME+I YA AVGSLMYAMVCTRPDIA  +GVVSRFLSNPGKEHW  VKWILRYL+GTSK C
Sbjct: 1107 MERIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGTSKLC 1166

Query: 1526 LCFGGSKPLLEGY 1564
            LCFG   P+L GY
Sbjct: 1167 LCFGEDNPVLVGY 1179


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  300 bits (767), Expect = 1e-78
 Identities = 154/271 (56%), Positives = 190/271 (70%)
 Frame = +3

Query: 384  THELVEKPQGRKILKNKWIYKVKHEENNPHLRHKARLVVKGFGQRKKIDFDEIFSPVVKM 563
            T ELV+ P+ RK LKN+W+Y+VKHEE     R KARLVVKGF Q+K IDFDEIFSPVVK 
Sbjct: 840  TFELVKAPKNRKALKNRWVYRVKHEEGTSVPRFKARLVVKGFSQKKGIDFDEIFSPVVKF 899

Query: 564  TSIRVVLGMTASMNLEIEQLDVKTVFLHGDLEEDVYMDQPEEFEVKGKEHLVCKLIKRLY 743
            +SIRVVLG+ A +++EIEQ+DVKT FLHGDL+E++YM+QPE F+VKGKE  VC+L K LY
Sbjct: 900  SSIRVVLGLAARLDIEIEQMDVKTAFLHGDLDEEIYMEQPEGFKVKGKEDYVCRLKKSLY 959

Query: 744  GLKQAPRQWYIKFGSFMAKQEYKKSVSDHCVFLQRFSDGDFIVLLLYVDDMLIIGPNINK 923
            GLKQAPRQWY KF S M+K  YKK+ SDHCVF+ R+SD DF++LLLYVDDMLI+G N ++
Sbjct: 960  GLKQAPRQWYKKFTSVMSKHGYKKTSSDHCVFVNRYSDDDFVILLLYVDDMLIVGRNASR 1019

Query: 924  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKQILGMWITRDRKGGKLWLS* 1103
                                                  AKQILGM I RDR+  KLWLS 
Sbjct: 1020 -------------------IQELKQELSKSFSMKDMGPAKQILGMKIIRDRQNKKLWLSQ 1060

Query: 1104 KSYIEKVLKKFNMDQAKPVSCTLGGQFRITK 1196
            + YIEKVL++F+M++AKPVS  L   F++ K
Sbjct: 1061 EKYIEKVLERFHMNEAKPVSTPLDMHFKLCK 1091



 Score =  118 bits (296), Expect(2) = 5e-44
 Identities = 53/73 (72%), Positives = 61/73 (83%)
 Frame = +2

Query: 1346 MEKILYAFAVGSLMYAMVCTRPDIAFTIGVVSRFLSNPGKEHWKGVKWILRYLKGTSKSC 1525
            M+++ Y+ AVGSLMYAMVCTRPDIA  +GVVSRFLSNPG+EHW  VKWILRYL+GTS   
Sbjct: 1104 MQRVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGREHWDAVKWILRYLRGTSSLS 1163

Query: 1526 LCFGGSKPLLEGY 1564
            LCFG  KP+L GY
Sbjct: 1164 LCFGTGKPILTGY 1176



 Score = 87.8 bits (216), Expect(2) = 5e-44
 Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
 Frame = +1

Query: 1564 YTDADIAADVDLMKSTSGYLVTFARGAVS*QSKL*KCVALSTTEAEYI----TVKELLWM 1731
            YTD+D+A D+D  KSTSGYL+T+A GAVS QS+L KCV LSTTEAE+I      KE+LWM
Sbjct: 1176 YTDSDMAGDIDTRKSTSGYLITYAGGAVSWQSRLQKCVDLSTTEAEFIASVEASKEMLWM 1235

Query: 1732 KRFYDELGLKQ 1764
            K+F  ELG  Q
Sbjct: 1236 KKFLQELGFVQ 1246


>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  292 bits (747), Expect = 2e-76
 Identities = 146/271 (53%), Positives = 192/271 (70%)
 Frame = +3

Query: 384  THELVEKPQGRKILKNKWIYKVKHEENNPHLRHKARLVVKGFGQRKKIDFDEIFSPVVKM 563
            T++LV+ P+G+K+LKN+W++K K ++ N  ++ KARLVVKG  Q+K IDFDEIF+PVVKM
Sbjct: 203  TYDLVKPPKGKKVLKNRWLFKNK-KDGNKLVKRKARLVVKGCHQKKGIDFDEIFAPVVKM 261

Query: 564  TSIRVVLGMTASMNLEIEQLDVKTVFLHGDLEEDVYMDQPEEFEVKGKEHLVCKLIKRLY 743
            TSIR++LG+   +NLE+EQLDVKT FLHGDL E++YM+QPE FEVKGKE+ VCKL K LY
Sbjct: 262  TSIRMILGLATCLNLELEQLDVKTAFLHGDLHEEIYMEQPEGFEVKGKENFVCKLKKSLY 321

Query: 744  GLKQAPRQWYIKFGSFMAKQEYKKSVSDHCVFLQRFSDGDFIVLLLYVDDMLIIGPNINK 923
            GLKQAPRQWY KF SFM+  EYK++ +D CV+ ++FS+G+FI+L LYVDDMLI+G ++  
Sbjct: 322  GLKQAPRQWYHKFDSFMSNNEYKRTTADPCVYFRKFSEGNFIILCLYVDDMLIVGQDVE- 380

Query: 924  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKQILGMWITRDRKGGKLWLS* 1103
                                                  AKQILGM I RDRK GKLWLS 
Sbjct: 381  ------------------MICRLKEDLSKSFDMKDLGPAKQILGMEIARDRKAGKLWLSQ 422

Query: 1104 KSYIEKVLKKFNMDQAKPVSCTLGGQFRITK 1196
            ++YIE+VL++FNM  AKPV+  L   F+++K
Sbjct: 423  ENYIERVLERFNMKNAKPVNTPLAAHFKLSK 453



 Score =  126 bits (317), Expect(2) = 2e-53
 Identities = 64/99 (64%), Positives = 78/99 (78%), Gaps = 4/99 (4%)
 Frame = +1

Query: 1564 YTDADIAADVDLMKSTSGYLVTFARGAVS*QSKL*KCVALSTTEAEYITV----KELLWM 1731
            +TDAD+A D+D  KSTSGYL  FARGA+S QSKL KCVALSTTE EYI      KE+LW+
Sbjct: 538  FTDADMAGDLDNRKSTSGYLFKFARGAISWQSKLQKCVALSTTEVEYIAAVEASKEMLWL 597

Query: 1732 KRFYDELGLKQKQFVVLCDSQSAIHLSKNPSFYSRSKHI 1848
            KRF  ELGLKQ ++VV CDS+SA+ LSKN  +++R+KHI
Sbjct: 598  KRFLQELGLKQSEYVVFCDSKSAMDLSKNIMYHARTKHI 636



 Score =  111 bits (277), Expect(2) = 2e-53
 Identities = 49/73 (67%), Positives = 59/73 (80%)
 Frame = +2

Query: 1346 MEKILYAFAVGSLMYAMVCTRPDIAFTIGVVSRFLSNPGKEHWKGVKWILRYLKGTSKSC 1525
            M  I Y+  VGSLMYAMVCTRPDIA  +G+VSR+L+NP K HW+ VKWILRYL+GTS   
Sbjct: 466  MSHIPYSSVVGSLMYAMVCTRPDIAHAVGLVSRYLANPSKVHWEAVKWILRYLRGTSNLS 525

Query: 1526 LCFGGSKPLLEGY 1564
            LCFGG +P+LEG+
Sbjct: 526  LCFGGGEPILEGF 538


>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score =  276 bits (707), Expect = 1e-71
 Identities = 144/280 (51%), Positives = 194/280 (69%), Gaps = 4/280 (1%)
 Frame = +3

Query: 366  DEMQRI----THELVEKPQGRKILKNKWIYKVKHEENNPHLRHKARLVVKGFGQRKKIDF 533
            DEM+ +    T +LV+ P+ +K L+N+WIY+VK E N+   R+KARLVVKGF QRK IDF
Sbjct: 776  DEMKSLHDNHTFDLVKLPKDKKALENRWIYRVKQESNSTSPRYKARLVVKGFRQRKGIDF 835

Query: 534  DEIFSPVVKMTSIRVVLGMTASMNLEIEQLDVKTVFLHGDLEEDVYMDQPEEFEVKGKEH 713
            +EIFSPVVKM+SIR+VL + A+++LE+EQ+DVKT FLHGDLEE++YM QP+ F V+GKE 
Sbjct: 836  NEIFSPVVKMSSIRIVLSLAATLDLEVEQMDVKTAFLHGDLEEEIYMKQPDGFLVEGKED 895

Query: 714  LVCKLIKRLYGLKQAPRQWYIKFGSFMAKQEYKKSVSDHCVFLQRFSDGDFIVLLLYVDD 893
             VC+L K LYGLKQAPRQWY KF S M +Q YKK+ SDHCVF+++F++ DFI+LLLYVDD
Sbjct: 896  HVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKTTSDHCVFVKKFANDDFIILLLYVDD 955

Query: 894  MLIIGPNINKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKQILGMWITRD 1073
            +LI+G +I+                                       AKQILG+ I RD
Sbjct: 956  ILIVGKDIS-------------------MINRLKKQLSESFAMKDMGAAKQILGIRIMRD 996

Query: 1074 RKGGKLWLS*KSYIEKVLKKFNMDQAKPVSCTLGGQFRIT 1193
            R+  KLWLS ++Y+++VL++F M+ AK VS  L   F+++
Sbjct: 997  RQEKKLWLSQENYVKRVLQRFQMENAKVVSTPLATHFKLS 1036



 Score =  117 bits (292), Expect(2) = 4e-52
 Identities = 57/99 (57%), Positives = 76/99 (76%), Gaps = 4/99 (4%)
 Frame = +1

Query: 1564 YTDADIAADVDLMKSTSGYLVTFARGAVS*QSKL*KCVALSTTEAEYITV----KELLWM 1731
            YTD+D+  D+D  +STSGY++ FA GAV+ QS+L KCVALSTTEAE+I +    KELLW+
Sbjct: 1122 YTDSDMGGDIDSRRSTSGYVIKFAGGAVAWQSRLQKCVALSTTEAEFIAITEACKELLWV 1181

Query: 1732 KRFYDELGLKQKQFVVLCDSQSAIHLSKNPSFYSRSKHI 1848
            K+   EL   Q ++++ CDSQSAI+L KN +F+SRSKHI
Sbjct: 1182 KKLLQELSFVQDKYLLFCDSQSAIYLGKNSTFHSRSKHI 1220



 Score =  116 bits (291), Expect(2) = 4e-52
 Identities = 53/73 (72%), Positives = 60/73 (82%)
 Frame = +2

Query: 1346 MEKILYAFAVGSLMYAMVCTRPDIAFTIGVVSRFLSNPGKEHWKGVKWILRYLKGTSKSC 1525
            M++I YA AVGSLMYAMVCTRPDIA  +G VSRF+SNPG+EHW  VKWILRYL+GT+   
Sbjct: 1050 MQRIPYASAVGSLMYAMVCTRPDIAHVVGTVSRFMSNPGREHWNAVKWILRYLRGTTCLR 1109

Query: 1526 LCFGGSKPLLEGY 1564
            LCFGG KP L GY
Sbjct: 1110 LCFGGDKPTLVGY 1122


>emb|CAN77763.1| hypothetical protein VITISV_026761 [Vitis vinifera]
          Length = 369

 Score =  275 bits (704), Expect = 2e-71
 Identities = 142/258 (55%), Positives = 176/258 (68%)
 Frame = +3

Query: 384  THELVEKPQGRKILKNKWIYKVKHEENNPHLRHKARLVVKGFGQRKKIDFDEIFSPVVKM 563
            T+EL+  P+G++ LKNKW+ K K + N    R+KARLV+K F Q+K IDF+EIFSPVVKM
Sbjct: 13   TYELMRLPKGKRALKNKWVLKRKSKPNKSQPRYKARLVMKDFSQKKVIDFEEIFSPVVKM 72

Query: 564  TSIRVVLGMTASMNLEIEQLDVKTVFLHGDLEEDVYMDQPEEFEVKGKEHLVCKLIKRLY 743
             S+RV+LG+  SMNLEIEQLDVKT+FLHGDLE+++YM+QPE F +K KEHLVC+L K LY
Sbjct: 73   YSMRVMLGLATSMNLEIEQLDVKTIFLHGDLEKEIYMEQPEGFTIKSKEHLVCRLKKSLY 132

Query: 744  GLKQAPRQWYIKFGSFMAKQEYKKSVSDHCVFLQRFSDGDFIVLLLYVDDMLIIGPNINK 923
            GLKQ  RQWY KF SFM K  Y ++  DHCVF+++FS G+FI+LLLYVDDMLI+  N +K
Sbjct: 133  GLKQTLRQWYKKFDSFMVKHGYDRTAFDHCVFVKKFSYGEFIILLLYVDDMLIVSHNTSK 192

Query: 924  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKQILGMWITRDRKGGKLWLS* 1103
                                                  A QIL + I+RDR  GKLWLS 
Sbjct: 193  -------------------IDKLKNELSKSFEMKDLGLASQILSIKISRDRTNGKLWLSQ 233

Query: 1104 KSYIEKVLKKFNMDQAKP 1157
            +SYIEKVL KFNM +AKP
Sbjct: 234  ESYIEKVLDKFNMGKAKP 251



 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 42/64 (65%), Positives = 50/64 (78%), Gaps = 4/64 (6%)
 Frame = +1

Query: 1669 KCVALSTTEAEYITV----KELLWMKRFYDELGLKQKQFVVLCDSQSAIHLSKNPSFYSR 1836
            KCV LSTTEAEYI +    KELLW K+F  ELGL+Q+++++ CDSQS IHLSKN  FYSR
Sbjct: 252  KCVVLSTTEAEYIVITEAIKELLWTKKFLQELGLQQERYLLYCDSQSDIHLSKNSIFYSR 311

Query: 1837 SKHI 1848
             KHI
Sbjct: 312  FKHI 315