BLASTX nr result

ID: Coptis25_contig00010867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010867
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   110   1e-22
emb|CBI35900.3| unnamed protein product [Vitis vinifera]              101   5e-20
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu...    92   4e-17
ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like...    87   2e-15

>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/122 (45%), Positives = 85/122 (69%), Gaps = 2/122 (1%)
 Frame = -2

Query: 378  QQIEAIKRNVSADLREVVKLYRWERRDNYLSLETSKSSRQKLRKHIQKFNDVLQQPVMFI 199
            + ++A ++N+  +L+E++KL RWE  ++YLS+E SK ++QKLRK IQK+ D+LQQPVM I
Sbjct: 3765 EHVQANRKNIETELKELLKLCRWEHSESYLSMENSKKTQQKLRKLIQKYTDLLQQPVMLI 3824

Query: 198  LNQEAEKR-IKGQSVFGKKLSSEAFER-SIVSQFSVDLKLFSDEERLIWYTEWRKKVVFA 25
            LN EA +R IK +S+   K+  +  ++       + DL  FSD+ R +WY +WRKKV FA
Sbjct: 3825 LNLEATQRGIKSKSIQELKVLGDFPDKHGEELNAATDLTEFSDKNRSVWYPDWRKKVAFA 3884

Query: 24   LE 19
            L+
Sbjct: 3885 LK 3886


>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
          Length = 5267

 Score =  101 bits (252), Expect = 5e-20
 Identities = 56/134 (41%), Positives = 85/134 (63%), Gaps = 14/134 (10%)
 Frame = -2

Query: 378  QQIEAIKRNVSADLREVVKLYRWERRDNYLSLETSKSSRQKLRKHIQKFN---------- 229
            + ++A ++N+  +L+E++KL RWE  ++YLS+E SK ++QKLRK IQK+           
Sbjct: 3751 EHVQANRKNIETELKELLKLCRWEHSESYLSMENSKKTQQKLRKLIQKYTVSDILYFLFS 3810

Query: 228  --DVLQQPVMFILNQEAEKR-IKGQSVFGKKLSSEAFER-SIVSQFSVDLKLFSDEERLI 61
              D+LQQPVM ILN EA +R IK +S+   K+  +  ++       + DL  FSD+ R +
Sbjct: 3811 SFDLLQQPVMLILNLEATQRGIKSKSIQELKVLGDFPDKHGEELNAATDLTEFSDKNRSV 3870

Query: 60   WYTEWRKKVVFALE 19
            WY +WRKKV FAL+
Sbjct: 3871 WYPDWRKKVAFALK 3884


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 49/124 (39%), Positives = 80/124 (64%), Gaps = 2/124 (1%)
 Frame = -2

Query: 384  VSQQIEAIKRNVSADLREVVKLYRWERRDNYLSLETSKSSRQKLRKHIQKFNDVLQQPVM 205
            + + IEA ++ +  +L++++KL+ WER +  LS+E SK +RQKLRK I K+ D+LQQPVM
Sbjct: 3804 ILEDIEANRKGIEMELKDILKLFHWERTEICLSVENSKRTRQKLRKLILKYTDLLQQPVM 3863

Query: 204  FILNQEAEKRIKGQSVFGKKLSSEAFERSIVSQFSV--DLKLFSDEERLIWYTEWRKKVV 31
             IL++EA+++       G K+ S  F +++    +   DL  F +++R IW  +WRKKV 
Sbjct: 3864 LILDREAQQK-------GPKIHSLQFPKALKDNKNTISDLTQFCEKDRSIWLADWRKKVT 3916

Query: 30   FALE 19
              L+
Sbjct: 3917 DTLQ 3920


>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
            gi|223539440|gb|EEF41030.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 5282

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 51/118 (43%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
 Frame = -2

Query: 384  VSQQIEAIKRNVSADLREVVKLYRWERRDNYLSLETSKSSRQKLRKHIQKFNDVLQQPVM 205
            + + IEA ++++  +L+E++KL RW+R ++ L  + SK++RQKLRK IQK+ DVLQQPVM
Sbjct: 3736 ILEHIEASRKSIGMELKELLKLCRWDRVEDCLCAKKSKTNRQKLRKLIQKYTDVLQQPVM 3795

Query: 204  FILNQEA-EKRIKGQSVFGKKLSSEAFERSIVSQFSVDLKLFSDEERLIWYTEWRKKV 34
             ILNQEA +K I  +S+   +  +   E +     +V L  FS+++RL+W+ +W KKV
Sbjct: 3796 LILNQEAGQKGIAIKSLQDPRPLNNILEANAGLLNNV-LDEFSNKDRLLWFPDWIKKV 3852


>ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Cucumis sativus]
          Length = 5431

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/125 (36%), Positives = 71/125 (56%)
 Frame = -2

Query: 384  VSQQIEAIKRNVSADLREVVKLYRWERRDNYLSLETSKSSRQKLRKHIQKFNDVLQQPVM 205
            + + IE  ++ +  +L+E+ KL RWER ++Y SLE S+ SR KLRK I+K++D+LQQPV+
Sbjct: 3923 ILEHIEGCRKKIEMELKEIQKLCRWERVESYCSLENSRRSRLKLRKLIKKYSDLLQQPVL 3982

Query: 204  FILNQEAEKRIKGQSVFGKKLSSEAFERSIVSQFSVDLKLFSDEERLIWYTEWRKKVVFA 25
               NQEA K+       G K               + +   S E+R  W+++WRK V   
Sbjct: 3983 LFFNQEAAKK-------GSK---------------IQILQSSAEDRFNWFSDWRKSVESV 4020

Query: 24   LEHWC 10
            L++ C
Sbjct: 4021 LQNVC 4025


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