BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010858
         (1509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241515.1| uncharacterized protein LOC100807657 [Glycin...    89   4e-15
ref|XP_002327032.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-15
gb|ABK94354.1| unknown [Populus trichocarpa]                           89   4e-15
gb|ABI18976.1| nuclear-localized RNA binding protein [Capsicum a...    87   9e-15
ref|NP_001056483.1| Os05g0589600 [Oryza sativa Japonica Group] g...    85   4e-14

>ref|NP_001241515.1| uncharacterized protein LOC100807657 [Glycine max]
           gi|255641702|gb|ACU21122.1| unknown [Glycine max]
          Length = 367

 Score = 88.6 bits (218), Expect = 4e-15
 Identities = 89/269 (33%), Positives = 118/269 (43%), Gaps = 26/269 (9%)
 Frame = +3

Query: 258 NGSVQGGNQGHRRQFSDHQSGNGYGNVGQHNERSQSECQNGYGNVGQHNERSQSECQNGY 437
           N SV+GG  G R        G G+     ++E S       Y  V    +  +S  + GY
Sbjct: 68  NESVRGGRGGGRGGGRGFGRGRGFSRDSSNDENSFPTSGAPYNQVSFEGDAGKSSERRGY 127

Query: 438 VNGKGQRQFV--RRNEKISNVGSETENTQEPMA---TSKTEDGFQFPKKSVXXXXXXXXA 602
              +G  +    RR    +    E E  +   A    S T  G +F ++           
Sbjct: 128 GGPRGPYRGGGGRRGGFSNGETGEAEEGRPRRAFDRRSGTGRGNEFKREGSGRGNWGAQT 187

Query: 603 N--SNKKENVANEVE----DKEPAKEGKELAKEDKVPSKEVKEV------MTLTEYEKM- 743
           +  +   + VANE E    D++PA E          P+ E +E       MTL EYEK+ 
Sbjct: 188 DELAQVTDEVANETEKNLGDEKPAVEEDVADGNKDSPTNETEEKEPEDKEMTLEEYEKVL 247

Query: 744 --RKPVLSMKTTEERTVDSKGFESMKLL--KKGNHEIFVKLGSEKDGAKRKEDANSKADK 911
             R+       TEER VD+K FESM+ L  KK NH+IF+KLGS+KD  KRKE A  K +K
Sbjct: 248 EERRKAFQALKTEERKVDTKEFESMQALSSKKDNHDIFIKLGSDKD--KRKE-AFEKEEK 304

Query: 912 VKKVSQAQTVLK----FIYPRPERGRGRG 986
            KK       LK      Y  P RGRGRG
Sbjct: 305 SKKSVSITEFLKPAEGEAYYNPGRGRGRG 333


>ref|XP_002327032.1| predicted protein [Populus trichocarpa] gi|222835347|gb|EEE73782.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score = 88.6 bits (218), Expect = 4e-15
 Identities = 93/271 (34%), Positives = 128/271 (47%), Gaps = 34/271 (12%)
 Frame = +3

Query: 276 GNQGHRRQFSDHQSGNGYGNVGQHNERSQSEC--------QNGYGNVGQHNERSQSECQN 431
           G  G+ R F++++S   +GN G    +  +E           GYG  G      +   + 
Sbjct: 87  GRGGYNRDFNNNESS--FGNSGAPTVQGAAEDGDTAKTFESRGYG--GPRGGGFRGGRRG 142

Query: 432 GYVN---GKGQRQFVRRNEKISNVGSETENTQEPMATSK-----------TEDGFQFPKK 569
           G+ N   G+G+R   R NE+ S  G   E  +E                 TE+     +K
Sbjct: 143 GFGNEEVGEGERPR-RTNERWSGTGRGNEMKREGSGRGNWGTPTDELALVTEEAANEGEK 201

Query: 570 SVXXXXXXXXANSN-KKENVANEVEDKEPAKEGKELAKEDKVPSKEVKEVMTLTEYEKM- 743
           ++        A ++ KKEN ANE E+KEP         EDKV        MTL EYEK+ 
Sbjct: 202 NLGDDKPVEEAAADRKKENPANEPEEKEP---------EDKV--------MTLEEYEKVL 244

Query: 744 ---RKPVLSMKTTEERTVDSKGFESMKLL--KKGNHEIFVKLGSEKDGAKRKEDANSKAD 908
              RK + ++KT EER VD+K F+SM+ L  KK N+++F+KLGS+KD  KRKE A  K +
Sbjct: 245 EEKRKALQALKT-EERKVDTKEFQSMQQLSNKKENNDVFIKLGSDKD--KRKE-AYEKDE 300

Query: 909 KVKKVSQAQTVLK-----FIYPRPERGRGRG 986
           K KK       LK       Y    RGRGRG
Sbjct: 301 KAKKSVSINEFLKPAEGERYYGSGSRGRGRG 331


>gb|ABK94354.1| unknown [Populus trichocarpa]
          Length = 373

 Score = 88.6 bits (218), Expect = 4e-15
 Identities = 93/271 (34%), Positives = 128/271 (47%), Gaps = 34/271 (12%)
 Frame = +3

Query: 276 GNQGHRRQFSDHQSGNGYGNVGQHNERSQSEC--------QNGYGNVGQHNERSQSECQN 431
           G  G+ R F++++S   +GN G    +  +E           GYG  G      +   + 
Sbjct: 87  GRGGYNRDFNNNESS--FGNSGAPTVQGAAEDGDTAKTFESRGYG--GPRGGGFRGGRRG 142

Query: 432 GYVN---GKGQRQFVRRNEKISNVGSETENTQEPMATSK-----------TEDGFQFPKK 569
           G+ N   G+G+R   R NE+ S  G   E  +E                 TE+     +K
Sbjct: 143 GFGNEEVGEGERPR-RTNERWSGTGRGNEMKREGSGRGNWGTPTDELALVTEEAANEGEK 201

Query: 570 SVXXXXXXXXANSN-KKENVANEVEDKEPAKEGKELAKEDKVPSKEVKEVMTLTEYEKM- 743
           ++        A ++ KKEN ANE E+KEP         EDKV        MTL EYEK+ 
Sbjct: 202 NLGDDKPVEEAAADRKKENPANEPEEKEP---------EDKV--------MTLEEYEKVL 244

Query: 744 ---RKPVLSMKTTEERTVDSKGFESMKLL--KKGNHEIFVKLGSEKDGAKRKEDANSKAD 908
              RK + ++KT EER VD+K F+SM+ L  KK N+++F+KLGS+KD  KRKE A  K +
Sbjct: 245 EEKRKALQALKT-EERKVDTKEFQSMQQLSNKKENNDVFIKLGSDKD--KRKE-AYEKDE 300

Query: 909 KVKKVSQAQTVLK-----FIYPRPERGRGRG 986
           K KK       LK       Y    RGRGRG
Sbjct: 301 KAKKSVSINEFLKPAEGERYYGSGSRGRGRG 331


>gb|ABI18976.1| nuclear-localized RNA binding protein [Capsicum annuum]
          Length = 360

 Score = 87.4 bits (215), Expect = 9e-15
 Identities = 89/285 (31%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
 Frame = +3

Query: 270 QGGNQGHRRQFSDHQSGNGYGNVGQHNER--------------------SQSECQNGYGN 389
           +GG  G  R +S  + G G+     +NE                       SE + GYG 
Sbjct: 69  RGGGSGGGRGYSRGRGGGGFNRESSNNENFPRNREFSGGIVAPEYVEGGRPSERRGGYGG 128

Query: 390 VGQHNERSQSECQNGYV--NGKGQRQFVRRNE-------KISNVGSETENTQEPMATSKT 542
                   Q    NG +    + +R F RR+        K    G     T+    T  T
Sbjct: 129 PRAFRGGRQGGFSNGEMPEGDRPRRTFERRSGTGRGSEIKREGAGRGNWGTEADEVTQMT 188

Query: 543 EDGFQFPKKS--VXXXXXXXXANSNKKENVANEVEDKEPAKEGKELAKEDKVPSKEVKEV 716
            +     +K+  V        A  +KKEN+  E EDKEP         EDK         
Sbjct: 189 GEVANEGEKNLNVEKPSTEEEAGDDKKENLVAEAEDKEP---------EDKE-------- 231

Query: 717 MTLTEYEKM----RKPVLSMKTTEERTVDSKGFESM-KLLKKGNHEIFVKLGSEKDGAKR 881
           MTL EYEK+    RK + ++KT EER VD+K FESM +L KK   EIFVKLGS       
Sbjct: 232 MTLEEYEKLLEEKRKALQALKTAEERKVDTKVFESMQQLSKKSGDEIFVKLGS------- 284

Query: 882 KEDANSKADKVKKVSQAQTVLKFIYP-RPER-----GRGRGDNQG 998
           K+     A+K +K  +A ++ +F+ P   ER     GRGRG  +G
Sbjct: 285 KDKKRESAEKEEKAKKAVSINEFLKPAEGERYYAPGGRGRGRGRG 329


>ref|NP_001056483.1| Os05g0589600 [Oryza sativa Japonica Group]
           gi|47777369|gb|AAT38003.1| putative nuclear RNA binding
           protein A [Oryza sativa Japonica Group]
           gi|49328113|gb|AAT58811.1| unknown protein [Oryza sativa
           Japonica Group] gi|113580034|dbj|BAF18397.1|
           Os05g0589600 [Oryza sativa Japonica Group]
           gi|222632748|gb|EEE64880.1| hypothetical protein
           OsJ_19739 [Oryza sativa Japonica Group]
          Length = 383

 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 89/274 (32%), Positives = 121/274 (44%), Gaps = 10/274 (3%)
 Frame = +3

Query: 207 EDGNGLYEEFPRKRVDANGSVQGGNQGHRRQFSDHQSGNGYGNVGQHNERSQSECQNGYG 386
           EDG G   E  R         +GG  G R  +SD QSG+ YG   +  ER      +G G
Sbjct: 123 EDGEGRQAERGR---GPRQPYRGG--GRRGGYSDGQSGDDYGRPRRAYER-----HSGTG 172

Query: 387 NVGQHNERSQSECQNGYVNGKGQRQFVRRNEKISNVGSETENTQEPMATSKTEDGFQFPK 566
              +           G V  +G  Q V          +E  NT+E  AT++ E       
Sbjct: 173 RGYELKREGSGRGNWGTVTDEGLAQEV----------AEAVNTEEAPATAEDE------- 215

Query: 567 KSVXXXXXXXXANSNKKENVANEVEDKEPAKEGKELAKEDKVPSKEVKEVMTLTEYEKM- 743
                          K E+V     DK+  KE  E  +E+K P  E KE MTL EYEK+ 
Sbjct: 216 --------------KKPEDVPQSEVDKD--KESPENEEEEKEP--EDKE-MTLEEYEKVL 256

Query: 744 ---RKPVLSMKTTEERTVDSKGFESMKLL--KKGNHEIFVKLGSEKDGAKRKEDANSKAD 908
              RK +L++K  E +    K  ++M+ L  KK N E+F+KLGS+KD  K+++D   K +
Sbjct: 257 EEKRKALLALKAEERKVEVDKELQAMQQLSVKKANEEVFIKLGSDKDLKKKEKD--EKDE 314

Query: 909 KVKKVSQAQTVLKFI----YPRPERGRGRGDNQG 998
           + KK       LK      Y  P RGRGRG  +G
Sbjct: 315 RTKKSLSINEFLKPAEGERYYNPGRGRGRGRGRG 348