BLASTX nr result
ID: Coptis25_contig00010855
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00010855 (1285 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN77350.1| hypothetical protein VITISV_007542 [Vitis vinifera] 394 e-107 ref|XP_002279513.1| PREDICTED: pre-mRNA-splicing factor syf2 iso... 391 e-106 ref|XP_002305528.1| predicted protein [Populus trichocarpa] gi|2... 384 e-104 ref|XP_004147047.1| PREDICTED: pre-mRNA-splicing factor syf2-lik... 377 e-102 ref|NP_001142424.1| uncharacterized protein LOC100274600 [Zea ma... 366 6e-99 >emb|CAN77350.1| hypothetical protein VITISV_007542 [Vitis vinifera] Length = 295 Score = 394 bits (1011), Expect = e-107 Identities = 207/300 (69%), Positives = 228/300 (76%), Gaps = 4/300 (1%) Frame = -1 Query: 1093 EGRVHPKCINASNPYHECTDYCFLKIA----QQPSSAAGVQSPDHEEPHNNNNSLDEKDL 926 E RVHP CINASNPYHEC +YCF KIA Q +GV D + PH+ +E+ Sbjct: 4 ERRVHPDCINASNPYHECVEYCFRKIAEAKAQMDKKESGVPDQD-KNPHDEGTDPEEQS- 61 Query: 925 HXXXXXXXXXXXXXXXXXXXDGSKLTGRQKKLFDLRLKMNEARKANQNAMVAEKKRIEAP 746 D ++LTGRQKKLF+LRLKMNEARKANQ AMVAEKK++EAP Sbjct: 62 ------DDDNDQPVEEIEEVDFTQLTGRQKKLFELRLKMNEARKANQTAMVAEKKKMEAP 115 Query: 745 QETRGISKQKFNEERKKKIGRLLDANGLDMKKAYMLDTXXXXXXXXXXXXXXXXPFGWDV 566 E+RGISKQK+ EERKKKIG+LLD NGLDMKKAYMLDT PFGWDV Sbjct: 116 PESRGISKQKWIEERKKKIGKLLDVNGLDMKKAYMLDTQEMAETKYKKWEKDPAPFGWDV 175 Query: 565 FNQKTLYDAYKKRTKNIVCDIEEYNKMKEADPEFYRDASSLQYGKSPKVSEAKIDKMVKE 386 FNQKTLY+AYKKRTKNI DI+EYNKMKEADPEFYR+ASSLQYGK+PK SE KIDKMVKE Sbjct: 176 FNQKTLYNAYKKRTKNIEVDIDEYNKMKEADPEFYREASSLQYGKAPKCSEDKIDKMVKE 235 Query: 385 LHDRDDNRKAFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 206 L DRD+ R++FSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD Sbjct: 236 LKDRDEKRQSFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 295 >ref|XP_002279513.1| PREDICTED: pre-mRNA-splicing factor syf2 isoform 2 [Vitis vinifera] Length = 295 Score = 391 bits (1005), Expect = e-106 Identities = 205/296 (69%), Positives = 227/296 (76%) Frame = -1 Query: 1093 EGRVHPKCINASNPYHECTDYCFLKIAQQPSSAAGVQSPDHEEPHNNNNSLDEKDLHXXX 914 E RVHP CINASNPYHEC +YCF KIA+ + A + + P + N+ DE Sbjct: 4 ERRVHPDCINASNPYHECVEYCFRKIAE---AKAQMDKKESGVPDQDKNTHDE-GTDPEE 59 Query: 913 XXXXXXXXXXXXXXXXDGSKLTGRQKKLFDLRLKMNEARKANQNAMVAEKKRIEAPQETR 734 D ++LTGRQKKLF+LRLKMNEARKANQ AMVAEKK++EAP E+R Sbjct: 60 RSDDDNDQPVEEIEEVDFTQLTGRQKKLFELRLKMNEARKANQTAMVAEKKKMEAPPESR 119 Query: 733 GISKQKFNEERKKKIGRLLDANGLDMKKAYMLDTXXXXXXXXXXXXXXXXPFGWDVFNQK 554 GISKQK+ EERKKKIG+LLD NGLDMKKAYMLDT PFGWDVFNQK Sbjct: 120 GISKQKWIEERKKKIGKLLDVNGLDMKKAYMLDTQEMAETKYKKWEKDPAPFGWDVFNQK 179 Query: 553 TLYDAYKKRTKNIVCDIEEYNKMKEADPEFYRDASSLQYGKSPKVSEAKIDKMVKELHDR 374 TLY+AYKKRTKNI DI+EYNKMKEADPEFYR+ASSLQYGK+PK SE KIDKMVKEL DR Sbjct: 180 TLYNAYKKRTKNIEVDIDEYNKMKEADPEFYREASSLQYGKAPKCSEDKIDKMVKELKDR 239 Query: 373 DDNRKAFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 206 D+ R++FSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD Sbjct: 240 DEKRQSFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 295 >ref|XP_002305528.1| predicted protein [Populus trichocarpa] gi|222848492|gb|EEE86039.1| predicted protein [Populus trichocarpa] Length = 308 Score = 384 bits (985), Expect = e-104 Identities = 197/308 (63%), Positives = 228/308 (74%), Gaps = 11/308 (3%) Frame = -1 Query: 1096 EEGRVHPKCINASNPYHECTDYCFLKIAQQPSSA-----------AGVQSPDHEEPHNNN 950 +E RVHP CINASNPYHEC +YCF+KIA+ + A G+ + P Sbjct: 3 DERRVHPDCINASNPYHECVEYCFIKIAEAKARAEIKETEVVQAKGGIGWSSSQAPEQGE 62 Query: 949 NSLDEKDLHXXXXXXXXXXXXXXXXXXXDGSKLTGRQKKLFDLRLKMNEARKANQNAMVA 770 +E+ H ++LTGR+KKLF+LRLKMNEARKANQ AMV+ Sbjct: 63 ELDEERPDHEHSEDDDDRAVLDNVEGDV--TQLTGRKKKLFELRLKMNEARKANQTAMVS 120 Query: 769 EKKRIEAPQETRGISKQKFNEERKKKIGRLLDANGLDMKKAYMLDTXXXXXXXXXXXXXX 590 EKK++EAP E+RGISKQK+ E+RKKKIG+LLDANGLDM KAYMLDT Sbjct: 121 EKKKMEAPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEVKYKKWEKD 180 Query: 589 XXPFGWDVFNQKTLYDAYKKRTKNIVCDIEEYNKMKEADPEFYRDASSLQYGKSPKVSEA 410 PFGWDVFNQKTLY+AYKKRTKN+ D+EEYNKMKEADPEFYR+ASSLQYGK+PK SE Sbjct: 181 PAPFGWDVFNQKTLYNAYKKRTKNVDVDLEEYNKMKEADPEFYREASSLQYGKAPKTSEE 240 Query: 409 KIDKMVKELHDRDDNRKAFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNL 230 KI++MVKEL DRD+NRK+FSRRR+F +EKDIDSINDRNEHFNKKIERAFGKYTLEIKNNL Sbjct: 241 KIERMVKELKDRDENRKSFSRRRRFRDEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNL 300 Query: 229 ERGTALPD 206 ERGTALPD Sbjct: 301 ERGTALPD 308 >ref|XP_004147047.1| PREDICTED: pre-mRNA-splicing factor syf2-like [Cucumis sativus] gi|449489629|ref|XP_004158369.1| PREDICTED: pre-mRNA-splicing factor syf2-like [Cucumis sativus] Length = 310 Score = 377 bits (969), Expect = e-102 Identities = 197/308 (63%), Positives = 225/308 (73%), Gaps = 11/308 (3%) Frame = -1 Query: 1096 EEGRVHPKCINASNPYHECTDYCF-----LKIAQQPSSAAGVQ------SPDHEEPHNNN 950 +EGRVHP C NASNPYHEC++YCF LK Q + VQ S P Sbjct: 3 DEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPETVQAGRSSGSSSFVPPDEYE 62 Query: 949 NSLDEKDLHXXXXXXXXXXXXXXXXXXXDGSKLTGRQKKLFDLRLKMNEARKANQNAMVA 770 + DEK D +KLTGR+KKLF++RLKMNEARKANQ A+ A Sbjct: 63 DLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKANQTAIAA 122 Query: 769 EKKRIEAPQETRGISKQKFNEERKKKIGRLLDANGLDMKKAYMLDTXXXXXXXXXXXXXX 590 EKK++E P E+RGISKQK+ E+RKKKIG+LLDANGLDM KAYMLDT Sbjct: 123 EKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKD 182 Query: 589 XXPFGWDVFNQKTLYDAYKKRTKNIVCDIEEYNKMKEADPEFYRDASSLQYGKSPKVSEA 410 P+GWDVFNQKTLY+AYKKRTKN+ D+EEYNKMKE+DPEFYR+ASSLQYGK+PK+SE Sbjct: 183 PAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISED 242 Query: 409 KIDKMVKELHDRDDNRKAFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNL 230 KID MVKEL DRD+ RK+FSRRRKFHE+KDIDSINDRNEHFNKKIERAFG+YTLEIKNNL Sbjct: 243 KIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNL 302 Query: 229 ERGTALPD 206 ERGTALPD Sbjct: 303 ERGTALPD 310 >ref|NP_001142424.1| uncharacterized protein LOC100274600 [Zea mays] gi|194688472|gb|ACF78320.1| unknown [Zea mays] gi|194690672|gb|ACF79420.1| unknown [Zea mays] gi|194708756|gb|ACF88462.1| unknown [Zea mays] gi|413934897|gb|AFW69448.1| hypothetical protein ZEAMMB73_419782 [Zea mays] Length = 356 Score = 366 bits (940), Expect = 6e-99 Identities = 189/298 (63%), Positives = 219/298 (73%), Gaps = 1/298 (0%) Frame = -1 Query: 1096 EEGRVHPKCINASNPYHECTDYCFLKIAQQPSSAAGVQSPDHEEPHNNNNSLDEKDLHXX 917 E+ VHP CINASNPYHEC+DYCF +IA S A G++ + + P + + D Sbjct: 59 EQRTVHPDCINASNPYHECSDYCFKRIADAKSPACGLEREERQPPADVFAAAGMSDAVEQ 118 Query: 916 XXXXXXXXXXXXXXXXXDG-SKLTGRQKKLFDLRLKMNEARKANQNAMVAEKKRIEAPQE 740 DG ++T +QKKLF+LRLKMNEARKANQ AMVAEKKR+E E Sbjct: 119 HRPIDNDSDEQEGAGPDDGYPQMTEKQKKLFELRLKMNEARKANQQAMVAEKKRMEPRGE 178 Query: 739 TRGISKQKFNEERKKKIGRLLDANGLDMKKAYMLDTXXXXXXXXXXXXXXXXPFGWDVFN 560 +RG+SKQK+ ++RKKKIG+LLD+NGLDMK AYMLDT P+GWDVFN Sbjct: 179 SRGVSKQKWLDDRKKKIGKLLDSNGLDMKMAYMLDTQETAEAKYKKWEKEPAPYGWDVFN 238 Query: 559 QKTLYDAYKKRTKNIVCDIEEYNKMKEADPEFYRDASSLQYGKSPKVSEAKIDKMVKELH 380 QKTLYDAYKKRTKNI D+E YNK KEADPEFYRDASSLQYGK V E IDKMVKEL Sbjct: 239 QKTLYDAYKKRTKNIEVDMESYNKAKEADPEFYRDASSLQYGKVSNVPEENIDKMVKELR 298 Query: 379 DRDDNRKAFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 206 +R++ RK+FSRRRKF+E+KDIDSINDRNEHFNKK+ERAFGKYTLEIKNNLERGTALPD Sbjct: 299 EREEKRKSFSRRRKFNEDKDIDSINDRNEHFNKKVERAFGKYTLEIKNNLERGTALPD 356