BLASTX nr result
ID: Coptis25_contig00010854
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00010854 (439 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853... 83 2e-14 ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis] g... 77 1e-12 emb|CAA15421.1| HMR1 protein [Antirrhinum majus] 74 2e-11 gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum] 72 5e-11 ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|157062... 69 4e-10 >ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853898 [Vitis vinifera] gi|147815426|emb|CAN74749.1| hypothetical protein VITISV_021497 [Vitis vinifera] gi|297734307|emb|CBI15554.3| unnamed protein product [Vitis vinifera] Length = 355 Score = 83.2 bits (204), Expect = 2e-14 Identities = 46/94 (48%), Positives = 55/94 (58%), Gaps = 4/94 (4%) Frame = +1 Query: 52 PPA--QAHMAHAL--TQPLKPSSNHPPYAEMIVSAXXXXXXXXXXXXXXXXXXXDSTYVN 219 PPA +AH+AHA T P NHPPYAEMI +A + T+ + Sbjct: 17 PPAASEAHVAHAANPTPSHGPPHNHPPYAEMITTAIGALNERTGSSKKAIAKYIERTFGD 76 Query: 220 LPQSHSALLTHHLKRLKKNGMVLMVKHSYKLPNS 321 LP SH ALLTHHLKRL+ +G V+MVKHSY LP S Sbjct: 77 LPPSHPALLTHHLKRLRSSGQVVMVKHSYMLPRS 110 >ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis] gi|223525178|gb|EEF27887.1| histone h1/h5, putative [Ricinus communis] Length = 435 Score = 77.0 bits (188), Expect = 1e-12 Identities = 39/86 (45%), Positives = 48/86 (55%) Frame = +1 Query: 64 AHMAHALTQPLKPSSNHPPYAEMIVSAXXXXXXXXXXXXXXXXXXXDSTYVNLPQSHSAL 243 AH A+A + S NHPPY +MI +A + Y LP +HSAL Sbjct: 53 AHAANATAPTVAQSFNHPPYTDMIYAAITALKERDGSSKRAIAKYIERVYPGLPPTHSAL 112 Query: 244 LTHHLKRLKKNGMVLMVKHSYKLPNS 321 LTHHLKRLK G+++MVK SYKLP S Sbjct: 113 LTHHLKRLKNTGLLVMVKKSYKLPRS 138 >emb|CAA15421.1| HMR1 protein [Antirrhinum majus] Length = 400 Score = 73.6 bits (179), Expect = 2e-11 Identities = 36/75 (48%), Positives = 44/75 (58%) Frame = +1 Query: 100 PSSNHPPYAEMIVSAXXXXXXXXXXXXXXXXXXXDSTYVNLPQSHSALLTHHLKRLKKNG 279 P+ NHPPYAEMI SA +S + LP +H++LL HLKRLK G Sbjct: 47 PAHNHPPYAEMITSAISALNERNGSSKRAIAKYVESNFTGLPATHASLLATHLKRLKDTG 106 Query: 280 MVLMVKHSYKLPNSS 324 +LMVKHSYKLP S+ Sbjct: 107 DILMVKHSYKLPRSA 121 >gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum] Length = 546 Score = 72.0 bits (175), Expect = 5e-11 Identities = 36/70 (51%), Positives = 40/70 (57%) Frame = +1 Query: 103 SSNHPPYAEMIVSAXXXXXXXXXXXXXXXXXXXDSTYVNLPQSHSALLTHHLKRLKKNGM 282 S HPPYAEMI +A D Y NLP +HSALLTHHLKRLK +G Sbjct: 41 SPTHPPYAEMITAAITALKERDGSSRIAIAKYIDRVYTNLPPNHSALLTHHLKRLKNSGY 100 Query: 283 VLMVKHSYKL 312 + MVKHSY L Sbjct: 101 LAMVKHSYML 110 >ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|15706274|emb|CAC69997.1| HMG I/Y like protein [Glycine max] Length = 413 Score = 68.9 bits (167), Expect = 4e-10 Identities = 35/89 (39%), Positives = 48/89 (53%) Frame = +1 Query: 55 PAQAHMAHALTQPLKPSSNHPPYAEMIVSAXXXXXXXXXXXXXXXXXXXDSTYVNLPQSH 234 P ++ +T ++NHPPY EMI +A + Y +LP +H Sbjct: 15 PFTVEPSNHVTPADNTNTNHPPYDEMIYTAIGALKEKDGSSKRAIGKYMEQVYKDLPPTH 74 Query: 235 SALLTHHLKRLKKNGMVLMVKHSYKLPNS 321 SALLTHHL RLK G++++VK SYKLP S Sbjct: 75 SALLTHHLNRLKSAGLLILVKKSYKLPGS 103