BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010854
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853...    83   2e-14
ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis] g...    77   1e-12
emb|CAA15421.1| HMR1 protein [Antirrhinum majus]                       74   2e-11
gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]                 72   5e-11
ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|157062...    69   4e-10

>ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853898 [Vitis vinifera]
           gi|147815426|emb|CAN74749.1| hypothetical protein
           VITISV_021497 [Vitis vinifera]
           gi|297734307|emb|CBI15554.3| unnamed protein product
           [Vitis vinifera]
          Length = 355

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 46/94 (48%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
 Frame = +1

Query: 52  PPA--QAHMAHAL--TQPLKPSSNHPPYAEMIVSAXXXXXXXXXXXXXXXXXXXDSTYVN 219
           PPA  +AH+AHA   T    P  NHPPYAEMI +A                   + T+ +
Sbjct: 17  PPAASEAHVAHAANPTPSHGPPHNHPPYAEMITTAIGALNERTGSSKKAIAKYIERTFGD 76

Query: 220 LPQSHSALLTHHLKRLKKNGMVLMVKHSYKLPNS 321
           LP SH ALLTHHLKRL+ +G V+MVKHSY LP S
Sbjct: 77  LPPSHPALLTHHLKRLRSSGQVVMVKHSYMLPRS 110


>ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis]
           gi|223525178|gb|EEF27887.1| histone h1/h5, putative
           [Ricinus communis]
          Length = 435

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/86 (45%), Positives = 48/86 (55%)
 Frame = +1

Query: 64  AHMAHALTQPLKPSSNHPPYAEMIVSAXXXXXXXXXXXXXXXXXXXDSTYVNLPQSHSAL 243
           AH A+A    +  S NHPPY +MI +A                   +  Y  LP +HSAL
Sbjct: 53  AHAANATAPTVAQSFNHPPYTDMIYAAITALKERDGSSKRAIAKYIERVYPGLPPTHSAL 112

Query: 244 LTHHLKRLKKNGMVLMVKHSYKLPNS 321
           LTHHLKRLK  G+++MVK SYKLP S
Sbjct: 113 LTHHLKRLKNTGLLVMVKKSYKLPRS 138


>emb|CAA15421.1| HMR1 protein [Antirrhinum majus]
          Length = 400

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/75 (48%), Positives = 44/75 (58%)
 Frame = +1

Query: 100 PSSNHPPYAEMIVSAXXXXXXXXXXXXXXXXXXXDSTYVNLPQSHSALLTHHLKRLKKNG 279
           P+ NHPPYAEMI SA                   +S +  LP +H++LL  HLKRLK  G
Sbjct: 47  PAHNHPPYAEMITSAISALNERNGSSKRAIAKYVESNFTGLPATHASLLATHLKRLKDTG 106

Query: 280 MVLMVKHSYKLPNSS 324
            +LMVKHSYKLP S+
Sbjct: 107 DILMVKHSYKLPRSA 121


>gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]
          Length = 546

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/70 (51%), Positives = 40/70 (57%)
 Frame = +1

Query: 103 SSNHPPYAEMIVSAXXXXXXXXXXXXXXXXXXXDSTYVNLPQSHSALLTHHLKRLKKNGM 282
           S  HPPYAEMI +A                   D  Y NLP +HSALLTHHLKRLK +G 
Sbjct: 41  SPTHPPYAEMITAAITALKERDGSSRIAIAKYIDRVYTNLPPNHSALLTHHLKRLKNSGY 100

Query: 283 VLMVKHSYKL 312
           + MVKHSY L
Sbjct: 101 LAMVKHSYML 110


>ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|15706274|emb|CAC69997.1| HMG
           I/Y like protein [Glycine max]
          Length = 413

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/89 (39%), Positives = 48/89 (53%)
 Frame = +1

Query: 55  PAQAHMAHALTQPLKPSSNHPPYAEMIVSAXXXXXXXXXXXXXXXXXXXDSTYVNLPQSH 234
           P     ++ +T     ++NHPPY EMI +A                   +  Y +LP +H
Sbjct: 15  PFTVEPSNHVTPADNTNTNHPPYDEMIYTAIGALKEKDGSSKRAIGKYMEQVYKDLPPTH 74

Query: 235 SALLTHHLKRLKKNGMVLMVKHSYKLPNS 321
           SALLTHHL RLK  G++++VK SYKLP S
Sbjct: 75  SALLTHHLNRLKSAGLLILVKKSYKLPGS 103