BLASTX nr result

ID: Coptis25_contig00010851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010851
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283646.2| PREDICTED: protein kinase APK1A, chloroplast...   164   7e-39
emb|CBI16124.3| unnamed protein product [Vitis vinifera]              164   7e-39
ref|XP_002531440.1| Protein kinase APK1A, chloroplast precursor,...   163   1e-38
ref|XP_002314178.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
ref|NP_001234409.1| protein kinase 1b [Solanum lycopersicum] gi|...   162   3e-38

>ref|XP_002283646.2| PREDICTED: protein kinase APK1A, chloroplastic-like [Vitis
           vinifera]
          Length = 442

 Score =  164 bits (415), Expect = 7e-39
 Identities = 86/125 (68%), Positives = 100/125 (80%), Gaps = 12/125 (9%)
 Frame = -3

Query: 341 KGLAFLHSSEMQVIHRDLKTSSILLDLNYNAKLSYY----------KIHVSTRP--TCGY 198
           KGLAFLHS+E +VI+RD KTS+ILLD NYNAKLS +          K HVSTR   T GY
Sbjct: 193 KGLAFLHSAETKVIYRDFKTSNILLDSNYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGY 252

Query: 197 AAPEYIATGNLTAESNVYSFGVVLLEILCGRRTVDNNRPSGEHSLVEWAKPYLNHKHKVF 18
           AAPEY+ATG+LTA S+VYSFGVVLLE+L GRR VD NRPSGEH+LVEWAKPYL +K K+F
Sbjct: 253 AAPEYLATGHLTARSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLANKRKIF 312

Query: 17  RVLDS 3
           R+LD+
Sbjct: 313 RILDN 317


>emb|CBI16124.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score =  164 bits (415), Expect = 7e-39
 Identities = 86/125 (68%), Positives = 100/125 (80%), Gaps = 12/125 (9%)
 Frame = -3

Query: 341 KGLAFLHSSEMQVIHRDLKTSSILLDLNYNAKLSYY----------KIHVSTRP--TCGY 198
           KGLAFLHS+E +VI+RD KTS+ILLD NYNAKLS +          K HVSTR   T GY
Sbjct: 193 KGLAFLHSAETKVIYRDFKTSNILLDSNYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGY 252

Query: 197 AAPEYIATGNLTAESNVYSFGVVLLEILCGRRTVDNNRPSGEHSLVEWAKPYLNHKHKVF 18
           AAPEY+ATG+LTA S+VYSFGVVLLE+L GRR VD NRPSGEH+LVEWAKPYL +K K+F
Sbjct: 253 AAPEYLATGHLTARSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLANKRKIF 312

Query: 17  RVLDS 3
           R+LD+
Sbjct: 313 RILDN 317


>ref|XP_002531440.1| Protein kinase APK1A, chloroplast precursor, putative [Ricinus
           communis] gi|223528959|gb|EEF30952.1| Protein kinase
           APK1A, chloroplast precursor, putative [Ricinus
           communis]
          Length = 336

 Score =  163 bits (413), Expect = 1e-38
 Identities = 85/125 (68%), Positives = 100/125 (80%), Gaps = 12/125 (9%)
 Frame = -3

Query: 341 KGLAFLHSSEMQVIHRDLKTSSILLDLNYNAKLSYY----------KIHVSTRP--TCGY 198
           KGLAFLHS+E +VI+RD KTS+ILLD NYNAKLS +          K HVSTR   T GY
Sbjct: 123 KGLAFLHSAENKVIYRDFKTSNILLDSNYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGY 182

Query: 197 AAPEYIATGNLTAESNVYSFGVVLLEILCGRRTVDNNRPSGEHSLVEWAKPYLNHKHKVF 18
           AAPEY+ATG+LTA S+VYSFGVVLLE+L GRR +D NRPSGEH+LVEWAKPYL +K K+F
Sbjct: 183 AAPEYLATGHLTARSDVYSFGVVLLEMLSGRRAIDKNRPSGEHNLVEWAKPYLANKRKIF 242

Query: 17  RVLDS 3
           R+LD+
Sbjct: 243 RILDN 247


>ref|XP_002314178.1| predicted protein [Populus trichocarpa] gi|222850586|gb|EEE88133.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  163 bits (413), Expect = 1e-38
 Identities = 86/125 (68%), Positives = 100/125 (80%), Gaps = 12/125 (9%)
 Frame = -3

Query: 341 KGLAFLHSSEMQVIHRDLKTSSILLDLNYNAKLSYY----------KIHVSTRP--TCGY 198
           KGLAFLHS+E +VI+RD KTS+ILLD  YNAKLS +          K HVSTR   T GY
Sbjct: 179 KGLAFLHSAETKVIYRDFKTSNILLDSKYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGY 238

Query: 197 AAPEYIATGNLTAESNVYSFGVVLLEILCGRRTVDNNRPSGEHSLVEWAKPYLNHKHKVF 18
           AAPEY+ATG+LTA+S+VYSFGVVLLE+L GRR VD NRPSGEH+LVEWAKPYL +K K+F
Sbjct: 239 AAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLANKRKIF 298

Query: 17  RVLDS 3
           R+LDS
Sbjct: 299 RILDS 303


>ref|NP_001234409.1| protein kinase 1b [Solanum lycopersicum]
           gi|189163920|gb|ACD77110.1| protein kinase 1b [Solanum
           lycopersicum]
          Length = 401

 Score =  162 bits (409), Expect = 3e-38
 Identities = 85/125 (68%), Positives = 100/125 (80%), Gaps = 12/125 (9%)
 Frame = -3

Query: 341 KGLAFLHSSEMQVIHRDLKTSSILLDLNYNAKLSYY----------KIHVSTRP--TCGY 198
           KGLAFLHS+E +VI+RD KTS+ILLD NY AKLS +          K HVSTR   T GY
Sbjct: 187 KGLAFLHSAETKVIYRDFKTSNILLDSNYTAKLSDFGLAKDGPTGDKSHVSTRVMGTYGY 246

Query: 197 AAPEYIATGNLTAESNVYSFGVVLLEILCGRRTVDNNRPSGEHSLVEWAKPYLNHKHKVF 18
           AAPEY+ATG+LT++S+VYSFGVVLLE+L GRR +D NRPSGEH+LVEWAKPYL +K KVF
Sbjct: 247 AAPEYMATGHLTSKSDVYSFGVVLLEMLSGRRAIDKNRPSGEHNLVEWAKPYLGNKRKVF 306

Query: 17  RVLDS 3
           RVLD+
Sbjct: 307 RVLDT 311


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