BLASTX nr result

ID: Coptis25_contig00010849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010849
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554113.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, ...   111   5e-23
ref|XP_003529496.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, ...   111   7e-23
ref|XP_003555172.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, ...   110   9e-23
ref|XP_003566872.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, ...   110   2e-22
gb|ACG45252.1| hydroxymethylglutaryl-CoA lyase [Zea mays]             109   2e-22

>ref|XP_003554113.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like
           [Glycine max]
          Length = 412

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = -2

Query: 386 AKGASGNVATEDVVYMLNGLGVKTNVDLGKLMSAGEFICKHLGRASGSKAAVALSRITLD 207
           AKGA+GNVATEDVVYMLNGLGVKTNVDLGKLM AG+FICKHLGRASGSKAA ALS++T  
Sbjct: 349 AKGATGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFICKHLGRASGSKAATALSKVTSH 408

Query: 206 ASKI 195
           ASK+
Sbjct: 409 ASKL 412


>ref|XP_003529496.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like
           [Glycine max]
          Length = 433

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/64 (87%), Positives = 58/64 (90%)
 Frame = -2

Query: 386 AKGASGNVATEDVVYMLNGLGVKTNVDLGKLMSAGEFICKHLGRASGSKAAVALSRITLD 207
           AKGASGNVATEDVVYMLNGLGVKTNVDLGKLMSAGEFI KHLGR SGSK  +A SR+T D
Sbjct: 370 AKGASGNVATEDVVYMLNGLGVKTNVDLGKLMSAGEFIGKHLGRPSGSKTTIAFSRVTAD 429

Query: 206 ASKI 195
           ASKI
Sbjct: 430 ASKI 433


>ref|XP_003555172.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like
           [Glycine max]
          Length = 435

 Score =  110 bits (276), Expect = 9e-23
 Identities = 57/64 (89%), Positives = 58/64 (90%)
 Frame = -2

Query: 386 AKGASGNVATEDVVYMLNGLGVKTNVDLGKLMSAGEFICKHLGRASGSKAAVALSRITLD 207
           AKGASGNVATEDVVYMLNGLGVKTNVDLGKLM AGEFI KHLGR SGSK AVA SR+T D
Sbjct: 372 AKGASGNVATEDVVYMLNGLGVKTNVDLGKLMLAGEFIGKHLGRPSGSKTAVAFSRVTAD 431

Query: 206 ASKI 195
           ASKI
Sbjct: 432 ASKI 435


>ref|XP_003566872.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like
           [Brachypodium distachyon]
          Length = 443

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/64 (82%), Positives = 60/64 (93%)
 Frame = -2

Query: 386 AKGASGNVATEDVVYMLNGLGVKTNVDLGKLMSAGEFICKHLGRASGSKAAVALSRITLD 207
           AKGASGNVATEDVVYML+GLG+KT VDLGK+MSAGEFICKHLGR SGSKAA+ALS +T +
Sbjct: 380 AKGASGNVATEDVVYMLHGLGIKTGVDLGKVMSAGEFICKHLGRQSGSKAAIALSNVTAN 439

Query: 206 ASKI 195
           ASK+
Sbjct: 440 ASKL 443


>gb|ACG45252.1| hydroxymethylglutaryl-CoA lyase [Zea mays]
          Length = 435

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/64 (82%), Positives = 60/64 (93%)
 Frame = -2

Query: 386 AKGASGNVATEDVVYMLNGLGVKTNVDLGKLMSAGEFICKHLGRASGSKAAVALSRITLD 207
           AKGASGNVATEDVVYMLNGLGVKT VDLGK+M+AGEFIC+HLGR SGSKAA ALS++T +
Sbjct: 372 AKGASGNVATEDVVYMLNGLGVKTGVDLGKVMAAGEFICRHLGRQSGSKAATALSKVTAN 431

Query: 206 ASKI 195
           ASK+
Sbjct: 432 ASKL 435


Top