BLASTX nr result
ID: Coptis25_contig00010846
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00010846
(2580 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003533145.1| PREDICTED: coiled-coil domain-containing pro... 370 e-171
ref|XP_004140828.1| PREDICTED: coiled-coil domain-containing pro... 363 e-170
ref|NP_001154775.1| DNA primase [Arabidopsis thaliana] gi|332008... 357 e-169
gb|EEC81996.1| hypothetical protein OsI_25931 [Oryza sativa Indi... 356 e-168
dbj|BAD31083.1| unknown protein [Oryza sativa Japonica Group] gi... 354 e-167
>ref|XP_003533145.1| PREDICTED: coiled-coil domain-containing protein 111 homolog [Glycine
max]
Length = 634
Score = 370 bits (949), Expect(2) = e-171
Identities = 172/260 (66%), Positives = 215/260 (82%), Gaps = 1/260 (0%)
Frame = -2
Query: 2576 SPLVFYGSPHGVPVKRPTRLL-KLLHEIHGDLSEETNLRARKDIWATFPKQDQAMNFSKQ 2400
SP+VFYGSP G+P K+PTR+L ++L EI ++S++ L RK++W TFP+QD+AM F+K
Sbjct: 105 SPIVFYGSPCGIPPKKPTRMLWRMLREICPNVSQQNILSIRKEVWMTFPRQDEAMKFAKG 164
Query: 2399 YPHARLFSYQDHVSGQRRFLVSTYTEFWQRYKNMDSTFRHHYEVIQEGLPCHLYFDLEFD 2220
+FSYQDH +GQRRFLVSTYTEFW+RY NM+ FRHHYEVIQ GLPCHLYFDLEF+
Sbjct: 165 QEDVHVFSYQDHFNGQRRFLVSTYTEFWRRYNNMNPKFRHHYEVIQAGLPCHLYFDLEFN 224
Query: 2219 KRVNLEKNGEEMVDVLLSVIFYALLDKYSIHGEEDWVIELDSSTEEKFSRHLIIRVPKSA 2040
K+VN KNGEEMVD+L+SV+ A +KY+I G+ DWV+ELDSS E+KFSRH+I+R+PK+A
Sbjct: 225 KKVNTGKNGEEMVDLLISVVLEAFHEKYAIQGDHDWVVELDSSNEDKFSRHIIVRIPKTA 284
Query: 2039 FKDNSHAGAFVAEVCSRICSGRDRDHKLQKLFVSKDLSSHEPLHHLFVDTAVYSRNRCFR 1860
FKDNSHAGAFV+E+CSRI + R++D +KLFV KD S++E LFVDTAVYSRNRCFR
Sbjct: 285 FKDNSHAGAFVSEICSRILNAREKDKSFEKLFVMKDSSNNESAGQLFVDTAVYSRNRCFR 344
Query: 1859 LALSSKAGKKSILLPTSRFK 1800
L LSSKAGK+S+LLPT RFK
Sbjct: 345 LPLSSKAGKRSVLLPTKRFK 364
Score = 259 bits (663), Expect(2) = e-171
Identities = 129/264 (48%), Positives = 172/264 (65%), Gaps = 2/264 (0%)
Frame = -3
Query: 1795 EQDMFMDSLICKMDGDCQKLLICKMDVDCMKTLCFDSEDKCDYENLSTAP-SLALHACTT 1619
E+D+FM SLIC MD DC+ L+CK D+DC+KTL FD+E+ + N + P L T+
Sbjct: 370 EEDIFMASLICNMDVDCKTYLVCKTDLDCVKTLHFDTEENSNVSNSTQIPPEFTLGTSTS 429
Query: 1618 DFPTTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGVIVYNMLRNRYCERIGR 1439
D TTYF+GKSPFP LD F+ S+AS+GN+ G I SWY+FSE+G++VY+M +NRYCERIGR
Sbjct: 430 DVSTTYFMGKSPFPFLDKFILSVASVGNIPGNIHSWYYFSEFGLMVYSMTKNRYCERIGR 489
Query: 1438 QHKSNHVMYVVDFKRTVYYQKCYDPDCKGYRSPFRPIPDDVIPDTSTCFNSI-QSDDHRV 1262
QHKSN+V+YVVD + VYYQKC+DPDC+GYRSP R IP V + S S DD +
Sbjct: 490 QHKSNNVIYVVDLRMAVYYQKCHDPDCRGYRSPSRQIPVHVFSNPSDVIGSFGLLDDEQP 549
Query: 1261 GNNDLDHQLGQNEVDHIPCDSDQKITDSCKKDGWWLEAVKIADEFESRRKMQNPGKLVAD 1082
++ L HQL N+ ++ D + D WWLEA+++ ++ M+N
Sbjct: 550 VDDKLRHQLDDNKEQNLLQFKD--TVEDNSNDSWWLEAIRVVED------MENKQTKTEQ 601
Query: 1081 QGIDDDEGDCEWWMAVERTTSQTE 1010
+ ID+DE EWW AVE T SQ E
Sbjct: 602 EVIDEDE---EWWQAVESTASQVE 622
>ref|XP_004140828.1| PREDICTED: coiled-coil domain-containing protein 111 homolog [Cucumis
sativus]
Length = 648
Score = 363 bits (932), Expect(2) = e-170
Identities = 173/257 (67%), Positives = 208/257 (80%)
Frame = -2
Query: 2576 SPLVFYGSPHGVPVKRPTRLLKLLHEIHGDLSEETNLRARKDIWATFPKQDQAMNFSKQY 2397
SP+VFYGSP GVP KRP+ L +LL EI DLSE++ + K +WATFP+Q++A+ FS+++
Sbjct: 84 SPIVFYGSPRGVPPKRPSSLWRLLREIRVDLSEQSRFKLSKQVWATFPRQEEAIKFSREH 143
Query: 2396 PHARLFSYQDHVSGQRRFLVSTYTEFWQRYKNMDSTFRHHYEVIQEGLPCHLYFDLEFDK 2217
+FSYQDH +GQRRFLVS+Y+EFW RYK+MD+ RHHYEVIQEG PCHLYFDLE+ K
Sbjct: 144 TDVHIFSYQDHFNGQRRFLVSSYSEFWHRYKSMDAKCRHHYEVIQEGAPCHLYFDLEYSK 203
Query: 2216 RVNLEKNGEEMVDVLLSVIFYALLDKYSIHGEEDWVIELDSSTEEKFSRHLIIRVPKSAF 2037
R+N KNG+EMVD L+SV+ AL +KYSI G DWV+ELDSS EEKFSRHLIIRVPK AF
Sbjct: 204 RINTGKNGDEMVDSLISVVLQALNEKYSIQGSFDWVLELDSSNEEKFSRHLIIRVPKVAF 263
Query: 2036 KDNSHAGAFVAEVCSRICSGRDRDHKLQKLFVSKDLSSHEPLHHLFVDTAVYSRNRCFRL 1857
KDNSHAGAFV E+CSRICS + + + ++LF+ KD SS E HLFVD AVYSRNRCFRL
Sbjct: 264 KDNSHAGAFVGEICSRICSAK-VEGRYEELFIKKDSSSTERPSHLFVDNAVYSRNRCFRL 322
Query: 1856 ALSSKAGKKSILLPTSR 1806
ALSSKAGK S+LLPT R
Sbjct: 323 ALSSKAGKTSVLLPTGR 339
Score = 264 bits (675), Expect(2) = e-170
Identities = 143/306 (46%), Positives = 181/306 (59%), Gaps = 48/306 (15%)
Frame = -3
Query: 1798 CEQDMFMDSLICKMDGDCQKLLICKMDVDCMKTLCFDSE--------------------- 1682
CE+DMFM SLIC +D DC+KLL+CKMD+DC+KTL F+ E
Sbjct: 346 CEEDMFMASLICNVDADCEKLLVCKMDLDCIKTLQFEMEVSSIPLCLILIIHDLFTFEFL 405
Query: 1681 ---DKCDY-ENLSTAPSLALHACTTDFPTTYFVGKSPFPALDMFVESIASIGNV------ 1532
+KC++ N S L DF T +GKSPFP +D FV+S+AS GNV
Sbjct: 406 LLQEKCNFGHNFSFTKEAVLTGSMRDFSATSCMGKSPFPDVDKFVQSVASTGNVAGKLPV 465
Query: 1531 ---------------SGRIRSWYWFSEYGVIVYNMLRNRYCERIGRQHKSNHVMYVVDFK 1397
SG+IR WYWFSE+G+IVY+M NRYCERIGR+HKSNHVMYVVD +
Sbjct: 466 FTMRQLLVINLAAAFSGKIRCWYWFSEFGLIVYSMSSNRYCERIGREHKSNHVMYVVDLR 525
Query: 1396 RTVYYQKCYDPDCKGYRSPFRPIPDDVIPDTSTCFNSIQSDDHRVGNND-LD-HQLGQNE 1223
R YYQKC+DPDC+GYRSP RPIP D IP +S Q + V +D +D HQ N+
Sbjct: 526 RAAYYQKCHDPDCRGYRSPLRPIPIDAIPSPWISTDSGQISNDMVSTHDCIDYHQSPSND 585
Query: 1222 VDHIPCDSDQKITDSCKKDGWWLEAVKIADEFESRRKMQNPGKLVADQGIDDDEGDCEWW 1043
+ + SD+ ITDS KD WWLE +++AD+ E++R M GKL D D +WW
Sbjct: 586 ENCLLLFSDKNITDSSVKDSWWLEVMRVADDVENKRNMV-LGKL--------DFEDDDWW 636
Query: 1042 MAVERT 1025
MAVE +
Sbjct: 637 MAVENS 642
>ref|NP_001154775.1| DNA primase [Arabidopsis thaliana] gi|332008880|gb|AED96263.1| DNA
primase [Arabidopsis thaliana]
Length = 614
Score = 357 bits (916), Expect(2) = e-169
Identities = 169/259 (65%), Positives = 212/259 (81%)
Frame = -2
Query: 2576 SPLVFYGSPHGVPVKRPTRLLKLLHEIHGDLSEETNLRARKDIWATFPKQDQAMNFSKQY 2397
SP+VFYGSP+GVP K+P LL+LL EI DLSEE +RK +WATFP+Q++A+ F K++
Sbjct: 96 SPIVFYGSPNGVPPKKPLSLLRLLREIRIDLSEERKAISRKGVWATFPRQEEAIKFEKRH 155
Query: 2396 PHARLFSYQDHVSGQRRFLVSTYTEFWQRYKNMDSTFRHHYEVIQEGLPCHLYFDLEFDK 2217
+ R+FSYQDH SGQRRFLVS+Y EFW+RY +MD RHHYEVIQEGLPCH+YFDLEF++
Sbjct: 156 DNVRIFSYQDHFSGQRRFLVSSYEEFWKRYLSMDPRHRHHYEVIQEGLPCHMYFDLEFNQ 215
Query: 2216 RVNLEKNGEEMVDVLLSVIFYALLDKYSIHGEEDWVIELDSSTEEKFSRHLIIRVPKSAF 2037
+ N KN +EMVD+L+SVI AL +KY+I G+EDW++ELDSST++KFSRH+I+ +PK AF
Sbjct: 216 KENEGKNVDEMVDILISVILEALREKYAIEGQEDWIVELDSSTKDKFSRHVIVIIPKVAF 275
Query: 2036 KDNSHAGAFVAEVCSRICSGRDRDHKLQKLFVSKDLSSHEPLHHLFVDTAVYSRNRCFRL 1857
KDNSH GAFV E+CSRI + ++ D +L+KLFV K+ + L LFVDTAVYSRNRCFRL
Sbjct: 276 KDNSHVGAFVGELCSRIVNAKETDERLRKLFVHKEANDSASL--LFVDTAVYSRNRCFRL 333
Query: 1856 ALSSKAGKKSILLPTSRFK 1800
ALSSKAGK S+LLPT RFK
Sbjct: 334 ALSSKAGKTSVLLPTGRFK 352
Score = 265 bits (678), Expect(2) = e-169
Identities = 133/256 (51%), Positives = 170/256 (66%), Gaps = 3/256 (1%)
Frame = -3
Query: 1795 EQDMFMDSLICKMDGDCQKLLICKMDVDCMKTLCFDSEDKCDYENL---STAPSLALHAC 1625
E+D+FM SLIC ++ DC+KLL+CKM+ DCMKTLCFD+E + NL A L+A
Sbjct: 358 ERDVFMTSLICNVESDCEKLLVCKMESDCMKTLCFDTE--VNSNNLVRDQNAQKFQLNAS 415
Query: 1624 TTDFPTTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGVIVYNMLRNRYCERI 1445
T+D T+YF GKSPFP LD F+ES AS GNV G+IR WYWFSE G+IVY+MLRNRYCERI
Sbjct: 416 TSDMSTSYFGGKSPFPQLDQFIESTASTGNVPGKIRCWYWFSEDGLIVYSMLRNRYCERI 475
Query: 1444 GRQHKSNHVMYVVDFKRTVYYQKCYDPDCKGYRSPFRPIPDDVIPDTSTCFNSIQSDDHR 1265
GR+HKSNHVMY+VD +R +YYQKCYDPDC+ YRSP RP+PD +P+ + +
Sbjct: 476 GREHKSNHVMYIVDLRRGIYYQKCYDPDCRDYRSPIRPVPDSYLPEDMVYYQGATQN--- 532
Query: 1264 VGNNDLDHQLGQNEVDHIPCDSDQKITDSCKKDGWWLEAVKIADEFESRRKMQNPGKLVA 1085
D + G+ VD CD D + + WWLEAVK+AD+ ES+ K P L
Sbjct: 533 --LCDNLYSEGECHVDK-ECDPD----SAASRGSWWLEAVKVADDLESKPKTLEP--LTW 583
Query: 1084 DQGIDDDEGDCEWWMA 1037
+ +DD +WW+A
Sbjct: 584 ENYEEDD----DWWVA 595
>gb|EEC81996.1| hypothetical protein OsI_25931 [Oryza sativa Indica Group]
Length = 609
Score = 356 bits (913), Expect(2) = e-168
Identities = 166/260 (63%), Positives = 208/260 (80%)
Frame = -2
Query: 2579 ISPLVFYGSPHGVPVKRPTRLLKLLHEIHGDLSEETNLRARKDIWATFPKQDQAMNFSKQ 2400
+SP+VFYGSP GVPVK+P LL+LL EI DL ++T+L +WATFP+Q++A+ F K
Sbjct: 81 MSPVVFYGSPQGVPVKKPLSLLRLLWEIRIDLKKQTDLVPSAGVWATFPRQEEAIRFCKA 140
Query: 2399 YPHARLFSYQDHVSGQRRFLVSTYTEFWQRYKNMDSTFRHHYEVIQEGLPCHLYFDLEFD 2220
+ + +FSYQDH++GQRRFLVSTY EFW+RY NMD RHHYEVIQ+G PCH+YFDLEFD
Sbjct: 141 HAYTNVFSYQDHLTGQRRFLVSTYDEFWKRYNNMDPQIRHHYEVIQDGSPCHIYFDLEFD 200
Query: 2219 KRVNLEKNGEEMVDVLLSVIFYALLDKYSIHGEEDWVIELDSSTEEKFSRHLIIRVPKSA 2040
R+N ++ +EMVD+L++V F AL DKYSI G+E+W+IELDSSTEEKFSRHLIIR+PK+A
Sbjct: 201 PRLNKMRDADEMVDILVAVTFSALHDKYSIEGQEEWIIELDSSTEEKFSRHLIIRIPKTA 260
Query: 2039 FKDNSHAGAFVAEVCSRICSGRDRDHKLQKLFVSKDLSSHEPLHHLFVDTAVYSRNRCFR 1860
FKDNSH GAF++E+CSRI S R + KL+++KD S HLF+DTAVYSRNRCFR
Sbjct: 261 FKDNSHVGAFISEICSRIASQRAANPNFDKLYITKDSSCTGRADHLFMDTAVYSRNRCFR 320
Query: 1859 LALSSKAGKKSILLPTSRFK 1800
LA SSK+GKKS L+ T RFK
Sbjct: 321 LAFSSKSGKKSFLVATERFK 340
Score = 263 bits (673), Expect(2) = e-168
Identities = 133/266 (50%), Positives = 177/266 (66%), Gaps = 3/266 (1%)
Frame = -3
Query: 1792 QDMFMDSLICKMDGDCQKLLICKMDVDCMKTLCFDSE-DKCDYENLSTAPSLALHACTTD 1616
+++FM+SLIC++D DC KLL CK+D+DC KTL FDSE + ++ S+ + D
Sbjct: 347 KELFMESLICRLDDDCDKLLTCKLDLDCKKTLHFDSEASMIRIQGRNSKDSIGTYQ--ND 404
Query: 1615 FPTTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGVIVYNMLRNRYCERIGRQ 1436
FP + G SPFPALD+F+ESIAS GNVSG+IR WYWFS YG+++Y+M R+RYCE IGR+
Sbjct: 405 FPVSNTYGISPFPALDVFIESIASFGNVSGKIRCWYWFSHYGLMIYSMSRSRYCEHIGRE 464
Query: 1435 HKSNHVMYVVDFKRTVYYQKCYDPDCKGYRSPFRPIPDDVIPDTSTCFNSIQSD-DHRVG 1259
HKSNHVMY+V+F+R YYQKCYDPDC+GYRSP RP+P DVIP+ S+ +S Q + V
Sbjct: 465 HKSNHVMYIVEFQRAAYYQKCYDPDCQGYRSPLRPVPWDVIPELSSISDSAQREYQGEVV 524
Query: 1258 NNDLDHQLGQNEVDHIPCDSDQKITDSCKKD-GWWLEAVKIADEFESRRKMQNPGKLVAD 1082
+++ G N D C+ + +T+S + D WW EAVK AD E+ + G D
Sbjct: 525 EINIE---GSNRNDEYLCNGTKSVTESGEDDPSWWEEAVKFADSIEN----TDHGPDTRD 577
Query: 1081 QGIDDDEGDCEWWMAVERTTSQTEQQ 1004
Q D D D +WWM ER Q E+Q
Sbjct: 578 QE-DKDCDDADWWMDAERIMVQIEEQ 602
>dbj|BAD31083.1| unknown protein [Oryza sativa Japonica Group]
gi|215707259|dbj|BAG93719.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 612
Score = 354 bits (908), Expect(2) = e-167
Identities = 165/260 (63%), Positives = 206/260 (79%)
Frame = -2
Query: 2579 ISPLVFYGSPHGVPVKRPTRLLKLLHEIHGDLSEETNLRARKDIWATFPKQDQAMNFSKQ 2400
+SP+VFYGSP GVPVK+P LL+LL EI DL ++T+L +WATFP+Q++A+ F K
Sbjct: 85 MSPVVFYGSPQGVPVKKPLSLLRLLREIRIDLKKQTDLVPSAGVWATFPRQEEAIRFCKA 144
Query: 2399 YPHARLFSYQDHVSGQRRFLVSTYTEFWQRYKNMDSTFRHHYEVIQEGLPCHLYFDLEFD 2220
+ + +FSYQDH+SGQRRFLVSTY EFW+RY NMD RHHYEVIQ+G PCH+YFDLEFD
Sbjct: 145 HAYTNVFSYQDHLSGQRRFLVSTYDEFWKRYNNMDPQIRHHYEVIQDGSPCHIYFDLEFD 204
Query: 2219 KRVNLEKNGEEMVDVLLSVIFYALLDKYSIHGEEDWVIELDSSTEEKFSRHLIIRVPKSA 2040
R+N ++ +EMVD+L++ F AL DKYSI G+E+W+IELDSSTEEKFSRHLIIR+PK+A
Sbjct: 205 PRLNKMRDADEMVDILVAATFSALHDKYSIEGQEEWIIELDSSTEEKFSRHLIIRIPKTA 264
Query: 2039 FKDNSHAGAFVAEVCSRICSGRDRDHKLQKLFVSKDLSSHEPLHHLFVDTAVYSRNRCFR 1860
FKDNSH GAF++E+CSRI S R + KL+++KD S HLF+D AVYSRNRCFR
Sbjct: 265 FKDNSHVGAFISEICSRIASQRAANPNFDKLYITKDSSCTGHADHLFMDIAVYSRNRCFR 324
Query: 1859 LALSSKAGKKSILLPTSRFK 1800
LA SSK+GKKS L+ T RFK
Sbjct: 325 LAFSSKSGKKSFLVATERFK 344
Score = 265 bits (677), Expect(2) = e-167
Identities = 133/267 (49%), Positives = 179/267 (67%), Gaps = 3/267 (1%)
Frame = -3
Query: 1795 EQDMFMDSLICKMDGDCQKLLICKMDVDCMKTLCFDSE-DKCDYENLSTAPSLALHACTT 1619
++++FM+SLIC++D DC KLL CK+D+DC KTL FDSE + ++ S+ +
Sbjct: 350 DKELFMESLICRLDDDCHKLLTCKLDLDCKKTLHFDSEASMIRIQGRNSKDSIGTYR--N 407
Query: 1618 DFPTTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGVIVYNMLRNRYCERIGR 1439
DFP + G SPFPALD+F+ESIAS GNVSG+IR WYWFS YG+++Y+M R+RYCE IGR
Sbjct: 408 DFPVSNTYGISPFPALDVFIESIASFGNVSGKIRCWYWFSHYGLMIYSMSRSRYCEHIGR 467
Query: 1438 QHKSNHVMYVVDFKRTVYYQKCYDPDCKGYRSPFRPIPDDVIPDTSTCFNSIQSD-DHRV 1262
+HKSNHVMY+V+F+R YYQKCYDPDC+GYRSP RP+P DVIP+ S+ +S Q + V
Sbjct: 468 EHKSNHVMYIVEFQRAAYYQKCYDPDCQGYRSPLRPVPWDVIPELSSISDSAQREYQGEV 527
Query: 1261 GNNDLDHQLGQNEVDHIPCDSDQKITDSCKKD-GWWLEAVKIADEFESRRKMQNPGKLVA 1085
+++ G+N D C+ + +T+S + D WW EAVK AD E+ + G
Sbjct: 528 VEINIE---GRNRNDEYLCNGTKSVTESGEDDPSWWEEAVKFADSIEN----TDHGPDTR 580
Query: 1084 DQGIDDDEGDCEWWMAVERTTSQTEQQ 1004
DQ D D D +WWM ER Q E+Q
Sbjct: 581 DQ--DKDCDDADWWMDAERIMVQIEEQ 605