BLASTX nr result

ID: Coptis25_contig00010841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010841
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76485.1| hypothetical protein VITISV_000801 [Vitis vinifera]   183   2e-44
ref|XP_002270560.1| PREDICTED: uncharacterized protein LOC100264...   183   2e-44
ref|XP_004147754.1| PREDICTED: uncharacterized protein LOC101216...   179   2e-43
ref|XP_002332207.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_004161558.1| PREDICTED: uncharacterized protein LOC101224...   177   9e-43

>emb|CAN76485.1| hypothetical protein VITISV_000801 [Vitis vinifera]
          Length = 369

 Score =  183 bits (465), Expect = 2e-44
 Identities = 87/141 (61%), Positives = 110/141 (78%), Gaps = 1/141 (0%)
 Frame = -2

Query: 595 IPVKAFSFKNSDVLSWAFHDSSKPGHSTTSECWVLHSTTEYAKRVINQTGPQMLASSAFS 416
           I VK FSFKNS++LSWAF DSSKPGH  TSE WVLHST EYA+ V+ Q G Q  +SS  +
Sbjct: 226 ISVKGFSFKNSEILSWAFCDSSKPGHPATSERWVLHSTMEYARGVVAQIGLQKPSSSTLA 285

Query: 415 NIAEELLQEFQ-SKFTIPRPFFMRAHRWDTAFPAIAVARDEKCLYDDSKRFAMCGDFCVS 239
            +AEEL +EFQ +  TI +PFF +AHRW +AFPA ++AR+EKCL+D  KR A+CGDFCVS
Sbjct: 286 KVAEELFEEFQRTGLTISQPFFKKAHRWGSAFPAASIAREEKCLWDKKKRVAICGDFCVS 345

Query: 238 PNVEGAVLSGIGAAAKILDVL 176
           P VEGA+LSG+ A++K+ + L
Sbjct: 346 PTVEGAILSGMAASSKLTEFL 366


>ref|XP_002270560.1| PREDICTED: uncharacterized protein LOC100264528 [Vitis vinifera]
           gi|296082792|emb|CBI21797.3| unnamed protein product
           [Vitis vinifera]
          Length = 369

 Score =  183 bits (464), Expect = 2e-44
 Identities = 87/141 (61%), Positives = 110/141 (78%), Gaps = 1/141 (0%)
 Frame = -2

Query: 595 IPVKAFSFKNSDVLSWAFHDSSKPGHSTTSECWVLHSTTEYAKRVINQTGPQMLASSAFS 416
           I VK FSFKNS++LSWAF DSSKPGH  TSE WVLHST EYA+ V+ Q G Q  +SS  +
Sbjct: 226 ISVKGFSFKNSEILSWAFCDSSKPGHPATSERWVLHSTMEYARGVVAQIGLQKPSSSTLA 285

Query: 415 NIAEELLQEFQ-SKFTIPRPFFMRAHRWDTAFPAIAVARDEKCLYDDSKRFAMCGDFCVS 239
            +AEEL +EFQ +  TI +PFF +AHRW +AFPA ++AR+EKCL+D  KR A+CGDFCVS
Sbjct: 286 KVAEELFEEFQRTGLTISQPFFKKAHRWGSAFPAASIAREEKCLWDRKKRVAICGDFCVS 345

Query: 238 PNVEGAVLSGIGAAAKILDVL 176
           P VEGA+LSG+ A++K+ + L
Sbjct: 346 PTVEGAILSGMAASSKLTEFL 366


>ref|XP_004147754.1| PREDICTED: uncharacterized protein LOC101216187 [Cucumis sativus]
          Length = 369

 Score =  179 bits (455), Expect = 2e-43
 Identities = 86/141 (60%), Positives = 107/141 (75%), Gaps = 1/141 (0%)
 Frame = -2

Query: 595 IPVKAFSFKNSDVLSWAFHDSSKPGHSTTSECWVLHSTTEYAKRVINQTGPQMLASSAFS 416
           IPVK F  KNS+VLSWA+ DSSKPG ST  E WVLHST EYA+RVI + G Q  + +   
Sbjct: 226 IPVKGFFIKNSEVLSWAYCDSSKPGRSTACERWVLHSTKEYAERVIAEYGLQKPSDAMLK 285

Query: 415 NIAEELLQEFQSK-FTIPRPFFMRAHRWDTAFPAIAVARDEKCLYDDSKRFAMCGDFCVS 239
            +AEEL QE QS     PRPFFM+AHRW +AFPA ++A +EKCL+D+SKR A+CGDFCVS
Sbjct: 286 KVAEELYQELQSVGLCTPRPFFMKAHRWGSAFPAASIAGEEKCLWDESKRVAICGDFCVS 345

Query: 238 PNVEGAVLSGIGAAAKILDVL 176
           PN+EGA+LSG+ AA+K   ++
Sbjct: 346 PNIEGAILSGLAAASKFQKIV 366


>ref|XP_002332207.1| predicted protein [Populus trichocarpa] gi|222875314|gb|EEF12445.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  179 bits (455), Expect = 2e-43
 Identities = 87/145 (60%), Positives = 110/145 (75%), Gaps = 5/145 (3%)
 Frame = -2

Query: 595 IPVKAFSFKNSDVLSWAFHDSSKPGHSTTS----ECWVLHSTTEYAKRVINQTGPQMLAS 428
           I VK FSFKNS++LSW+  DSSKPG ST      E WVLHST  YA+ +I QTG Q  +S
Sbjct: 225 ISVKGFSFKNSEILSWSHCDSSKPGRSTARHASVERWVLHSTANYARGIIAQTGLQKPSS 284

Query: 427 SAFSNIAEELLQEFQS-KFTIPRPFFMRAHRWDTAFPAIAVARDEKCLYDDSKRFAMCGD 251
           +  + +AEEL QEFQS    IPRPFFM+AHRW +AFP  ++AR++KCL+D  KR A+CGD
Sbjct: 285 ATLTKVAEELFQEFQSIGLNIPRPFFMKAHRWGSAFPTASIAREQKCLWDRKKRLAICGD 344

Query: 250 FCVSPNVEGAVLSGIGAAAKILDVL 176
           FCVSPNVEGA+LSG+ AA+K+ ++L
Sbjct: 345 FCVSPNVEGAILSGLAAASKLTEML 369


>ref|XP_004161558.1| PREDICTED: uncharacterized protein LOC101224633 [Cucumis sativus]
          Length = 369

 Score =  177 bits (450), Expect = 9e-43
 Identities = 85/141 (60%), Positives = 106/141 (75%), Gaps = 1/141 (0%)
 Frame = -2

Query: 595 IPVKAFSFKNSDVLSWAFHDSSKPGHSTTSECWVLHSTTEYAKRVINQTGPQMLASSAFS 416
           IPVK F  KNS+VLSWA+ DSSKPG ST  E WVLHST EYA+RVI + G Q  + +   
Sbjct: 226 IPVKGFFIKNSEVLSWAYCDSSKPGRSTACERWVLHSTKEYAERVIAEYGLQKPSDAMLK 285

Query: 415 NIAEELLQEFQSK-FTIPRPFFMRAHRWDTAFPAIAVARDEKCLYDDSKRFAMCGDFCVS 239
            +AEEL QE QS     PRPFFM+AHRW +AFPA ++  +EKCL+D+SKR A+CGDFCVS
Sbjct: 286 KVAEELYQELQSVGLCTPRPFFMKAHRWGSAFPAASIPGEEKCLWDESKRVAICGDFCVS 345

Query: 238 PNVEGAVLSGIGAAAKILDVL 176
           PN+EGA+LSG+ AA+K   ++
Sbjct: 346 PNIEGAILSGLAAASKFQKIV 366


Top