BLASTX nr result

ID: Coptis25_contig00010830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010830
         (1099 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529571.1| Chorismate synthase, chloroplast precursor, ...   392   e-107
ref|XP_002312018.1| chorismate synthase [Populus trichocarpa] gi...   392   e-106
ref|XP_002315301.1| chorismate synthase [Populus trichocarpa] gi...   391   e-106
ref|XP_003556230.1| PREDICTED: chorismate synthase, chloroplasti...   381   e-103
gb|ABA54870.1| putative chorismate synthase [Fagus sylvatica]         379   e-103

>ref|XP_002529571.1| Chorismate synthase, chloroplast precursor, putative [Ricinus
           communis] gi|223530947|gb|EEF32805.1| Chorismate
           synthase, chloroplast precursor, putative [Ricinus
           communis]
          Length = 435

 Score =  392 bits (1007), Expect = e-107
 Identities = 200/266 (75%), Positives = 217/266 (81%)
 Frame = +3

Query: 6   YAGTEVLAYVSQVHKVVLPEGVVDHETLTLNQIESNIVXXXXXXXXXXXXXXXXXXXQIE 185
           ++GTEVLAYVSQVHKVVLPE +VDHETLTL+QIESN                        
Sbjct: 195 FSGTEVLAYVSQVHKVVLPEDMVDHETLTLDQIESN------------------------ 230

Query: 186 SNIVRCPDPEYVEKMIAAIDTIRVRGDSVGGVVTCIARNVPRGLGSPVFDKLEAELSKAV 365
             IVRCPDPEY EKMIAAID IRVRGDSVGGVVTCI RNVPRGLGSPVFDKLEAEL+KAV
Sbjct: 231 --IVRCPDPEYAEKMIAAIDKIRVRGDSVGGVVTCIVRNVPRGLGSPVFDKLEAELAKAV 288

Query: 366 MSLPATKAFEFGSGFAGTFLTGSEHNDEFYTDEHGKIRTRTNRSGGIQGGISNGEIINMR 545
           MSLPATK FEFGSGFAGTFLTGSEHNDEFY +EHGKIRTRTNRSGGIQGGISNGE I MR
Sbjct: 289 MSLPATKGFEFGSGFAGTFLTGSEHNDEFYMEEHGKIRTRTNRSGGIQGGISNGETIYMR 348

Query: 546 VAFKPTATIGKKQLTVTRDRKEIELVTRGRHDPCVVPRAVPMVEAMVALVLADQLIGHHG 725
           +AFKPT+TIGKKQ TVTRD+ E EL+ RGRHDPCVVPRAVPMVEAMVALVL DQL+  + 
Sbjct: 349 IAFKPTSTIGKKQHTVTRDKVETELIARGRHDPCVVPRAVPMVEAMVALVLVDQLMAQYA 408

Query: 726 QCQLFPGNPDLQ*PIMLPTLEPVNLS 803
           QC +FP NP+LQ P+ LP  E VN++
Sbjct: 409 QCYMFPINPELQEPLKLPRAESVNMT 434


>ref|XP_002312018.1| chorismate synthase [Populus trichocarpa]
           gi|222851838|gb|EEE89385.1| chorismate synthase [Populus
           trichocarpa]
          Length = 438

 Score =  392 bits (1006), Expect = e-106
 Identities = 197/266 (74%), Positives = 218/266 (81%)
 Frame = +3

Query: 6   YAGTEVLAYVSQVHKVVLPEGVVDHETLTLNQIESNIVXXXXXXXXXXXXXXXXXXXQIE 185
           YAGTE+LAYVSQVHKVVLPEGVV+H++L+L+QIESN                        
Sbjct: 198 YAGTEILAYVSQVHKVVLPEGVVNHDSLSLDQIESN------------------------ 233

Query: 186 SNIVRCPDPEYVEKMIAAIDTIRVRGDSVGGVVTCIARNVPRGLGSPVFDKLEAELSKAV 365
             IVRCPDPEY EKMIAAID +RV+GDSVGGVVTCI RN PRGLGSPVFDKLEAEL+KA 
Sbjct: 234 --IVRCPDPEYAEKMIAAIDAVRVKGDSVGGVVTCIVRNAPRGLGSPVFDKLEAELAKAA 291

Query: 366 MSLPATKAFEFGSGFAGTFLTGSEHNDEFYTDEHGKIRTRTNRSGGIQGGISNGEIINMR 545
           MSLPATK FEFGSGF+GTFL+GSEHNDEFYTDEHG+IRTRTNRSGGIQGGISNGEIIN+R
Sbjct: 292 MSLPATKGFEFGSGFSGTFLSGSEHNDEFYTDEHGRIRTRTNRSGGIQGGISNGEIINLR 351

Query: 546 VAFKPTATIGKKQLTVTRDRKEIELVTRGRHDPCVVPRAVPMVEAMVALVLADQLIGHHG 725
           +AFKPT+TIG+KQ TVTRD+KEIEL+ RGRHDPCVVPRAVPMVEAMVALVL DQL+    
Sbjct: 352 IAFKPTSTIGRKQHTVTRDKKEIELIARGRHDPCVVPRAVPMVEAMVALVLMDQLMAQFS 411

Query: 726 QCQLFPGNPDLQ*PIMLPTLEPVNLS 803
           Q  LFP NPDLQ P+ +P LE  N S
Sbjct: 412 QSYLFPINPDLQEPLTMPRLEAANAS 437


>ref|XP_002315301.1| chorismate synthase [Populus trichocarpa]
           gi|118487444|gb|ABK95550.1| unknown [Populus
           trichocarpa] gi|222864341|gb|EEF01472.1| chorismate
           synthase [Populus trichocarpa]
          Length = 437

 Score =  391 bits (1004), Expect = e-106
 Identities = 196/266 (73%), Positives = 217/266 (81%)
 Frame = +3

Query: 6   YAGTEVLAYVSQVHKVVLPEGVVDHETLTLNQIESNIVXXXXXXXXXXXXXXXXXXXQIE 185
           YAGTE+LAYVSQVHKVVLPEGVVDH++LTL+Q+ESNI                       
Sbjct: 197 YAGTEILAYVSQVHKVVLPEGVVDHDSLTLDQMESNI----------------------- 233

Query: 186 SNIVRCPDPEYVEKMIAAIDTIRVRGDSVGGVVTCIARNVPRGLGSPVFDKLEAELSKAV 365
              VRCPDPEY EKMIAAID +RV+GDSVGGVVTCI RN PRGLGSPVFDKLEAEL+KA 
Sbjct: 234 ---VRCPDPEYAEKMIAAIDAVRVKGDSVGGVVTCIVRNAPRGLGSPVFDKLEAELAKAA 290

Query: 366 MSLPATKAFEFGSGFAGTFLTGSEHNDEFYTDEHGKIRTRTNRSGGIQGGISNGEIINMR 545
           MSLPATK FEFGSGFAGT LTGSEHNDEFYTD+HG+IRTRTNRSGGIQGGISNGEIINMR
Sbjct: 291 MSLPATKGFEFGSGFAGTLLTGSEHNDEFYTDKHGRIRTRTNRSGGIQGGISNGEIINMR 350

Query: 546 VAFKPTATIGKKQLTVTRDRKEIELVTRGRHDPCVVPRAVPMVEAMVALVLADQLIGHHG 725
           +AFKPT+TIGKKQ TVTRD+KE +L+ RGRHDPCVVPRAVPMVEAMVALVL DQL+  + 
Sbjct: 351 IAFKPTSTIGKKQHTVTRDKKETDLIARGRHDPCVVPRAVPMVEAMVALVLMDQLMAQYS 410

Query: 726 QCQLFPGNPDLQ*PIMLPTLEPVNLS 803
           QC L P N +LQ P+++P LE  N S
Sbjct: 411 QCYLLPINSELQEPLIMPRLEAANAS 436


>ref|XP_003556230.1| PREDICTED: chorismate synthase, chloroplastic-like [Glycine max]
          Length = 435

 Score =  381 bits (978), Expect = e-103
 Identities = 191/262 (72%), Positives = 211/262 (80%)
 Frame = +3

Query: 6   YAGTEVLAYVSQVHKVVLPEGVVDHETLTLNQIESNIVXXXXXXXXXXXXXXXXXXXQIE 185
           ++GTE+LAYVSQVHK+VLPE ++DH+TLTL+QIESN                        
Sbjct: 196 FSGTEILAYVSQVHKIVLPEDLIDHDTLTLDQIESN------------------------ 231

Query: 186 SNIVRCPDPEYVEKMIAAIDTIRVRGDSVGGVVTCIARNVPRGLGSPVFDKLEAELSKAV 365
             IVRCPDPEY EKMI+AID +RVRGDSVGGVVTCI RN PRGLGSPVFDKLEAEL+KA 
Sbjct: 232 --IVRCPDPEYAEKMISAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAA 289

Query: 366 MSLPATKAFEFGSGFAGTFLTGSEHNDEFYTDEHGKIRTRTNRSGGIQGGISNGEIINMR 545
           MSLPATK F+FGSGFAGTFLTGSEHNDEFY DEHG  RTRTNRSGGIQGGISNGEIINMR
Sbjct: 290 MSLPATKGFQFGSGFAGTFLTGSEHNDEFYIDEHGNTRTRTNRSGGIQGGISNGEIINMR 349

Query: 546 VAFKPTATIGKKQLTVTRDRKEIELVTRGRHDPCVVPRAVPMVEAMVALVLADQLIGHHG 725
           +AFKPT+TIGKKQ TVTRD+KE E + RGRHDPCVVPRAVPMVEAMVALVL DQL+  + 
Sbjct: 350 IAFKPTSTIGKKQKTVTRDKKETEFIARGRHDPCVVPRAVPMVEAMVALVLVDQLMAQYA 409

Query: 726 QCQLFPGNPDLQ*PIMLPTLEP 791
           QC LFP N DLQ P ++P L P
Sbjct: 410 QCNLFPVNSDLQEP-LVPILRP 430


>gb|ABA54870.1| putative chorismate synthase [Fagus sylvatica]
          Length = 434

 Score =  379 bits (974), Expect = e-103
 Identities = 193/264 (73%), Positives = 211/264 (79%)
 Frame = +3

Query: 9   AGTEVLAYVSQVHKVVLPEGVVDHETLTLNQIESNIVXXXXXXXXXXXXXXXXXXXQIES 188
           AGTE+ AYVSQVHKVVLPE +VD  TLTL+QIESN                         
Sbjct: 195 AGTEIFAYVSQVHKVVLPEDLVDPYTLTLDQIESN------------------------- 229

Query: 189 NIVRCPDPEYVEKMIAAIDTIRVRGDSVGGVVTCIARNVPRGLGSPVFDKLEAELSKAVM 368
            IVRCPDPEY EKMIAAID +RVRGDS+GGVVTCI R  PRGLGSPVFDKLEAEL+KA M
Sbjct: 230 -IVRCPDPEYAEKMIAAIDAVRVRGDSIGGVVTCIVRRCPRGLGSPVFDKLEAELAKAAM 288

Query: 369 SLPATKAFEFGSGFAGTFLTGSEHNDEFYTDEHGKIRTRTNRSGGIQGGISNGEIINMRV 548
           SLPATK FEFGSGFAGT L GSEHNDEF+TDE+G+IRTRTNRSGGIQGGISNGE+INMRV
Sbjct: 289 SLPATKGFEFGSGFAGTTLCGSEHNDEFFTDENGRIRTRTNRSGGIQGGISNGEVINMRV 348

Query: 549 AFKPTATIGKKQLTVTRDRKEIELVTRGRHDPCVVPRAVPMVEAMVALVLADQLIGHHGQ 728
           AFKPTATI +KQ TVTR++KEIEL+ RGRHDPCVVPRAVPMVEAMVALVLADQL+  + Q
Sbjct: 349 AFKPTATISRKQQTVTREKKEIELIARGRHDPCVVPRAVPMVEAMVALVLADQLMSQYAQ 408

Query: 729 CQLFPGNPDLQ*PIMLPTLEPVNL 800
           C LFP NPDLQ P  LP  EP ++
Sbjct: 409 CNLFPINPDLQEPFSLPRFEPAHV 432


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