BLASTX nr result

ID: Coptis25_contig00010825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010825
         (1325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270145.1| PREDICTED: TVP38/TMEM64 family membrane prot...   421   e-115
ref|XP_002270047.2| PREDICTED: LOW QUALITY PROTEIN: TVP38/TMEM64...   395   e-107
ref|XP_003535025.1| PREDICTED: uncharacterized protein LOC100800...   381   e-103
ref|XP_002519396.1| conserved hypothetical protein [Ricinus comm...   380   e-103
ref|XP_002332702.1| predicted protein [Populus trichocarpa] gi|2...   379   e-103

>ref|XP_002270145.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis
            vinifera] gi|297739420|emb|CBI29602.3| unnamed protein
            product [Vitis vinifera]
          Length = 320

 Score =  421 bits (1081), Expect = e-115
 Identities = 214/319 (67%), Positives = 237/319 (74%), Gaps = 3/319 (0%)
 Frame = +2

Query: 281  MVNSPEEESK---NAGAHAREDSEYVSLVISNDLRIGETDFLRAHSETRNKSLIWWLKAX 451
            M NS EE  K   N+G   RE+SEYV LVISN+ R+ E D L+  +ETR KS IWW KA 
Sbjct: 1    MPNSSEETDKLNTNSGHDVREESEYVRLVISNEARLSEADILQPQAETRIKSFIWWFKAL 60

Query: 452  XXXXXXXXXXXVSLKWVAPFLLEKVLLPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPS 631
                       V LKW APF+ EK+LLPI+ WEATAFGR                  IPS
Sbjct: 61   IFCVVNIIFLLVFLKWGAPFMFEKILLPIMHWEATAFGRPVLAFVLVASLALFPVLLIPS 120

Query: 632  GPSMWLAGMIFGYGLGFVIIMVGTTIGMALPYLIGLLFRDRIHQWLKRWPEKAAIIRLAG 811
            GPSMWLAGMIFGYGLGFVIIM+GTTIGM LPYLIGLLFRDRIHQWLKRWP+KAA+IRLAG
Sbjct: 121  GPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYLIGLLFRDRIHQWLKRWPQKAAMIRLAG 180

Query: 812  EGSWLHQFRVVAIFRISPFPYTIFNYAIVVTNMRFWPYICGSIAGMIPEAFIYIYSGKLI 991
            EGSW HQFRVVA+FR+SPFPYTIFNYAIVVT+M FWPY+ GSIAGM+PEAFIYIYSG+LI
Sbjct: 181  EGSWFHQFRVVALFRVSPFPYTIFNYAIVVTSMTFWPYLWGSIAGMVPEAFIYIYSGRLI 240

Query: 992  RTLADVRYGNHHLTTVEIVYNAISLXXXXXXXXXXXXYAKRALNELKQRERNGESSAAIG 1171
            RTLADV+YGN HLTT+EI+YN IS             YAKRALNELK  E NGE  A+  
Sbjct: 241  RTLADVQYGNQHLTTLEIIYNIISFIVAIITTVAFTIYAKRALNELKM-ETNGE-EASTS 298

Query: 1172 GLDSFEIEKLPLERPKHLG 1228
             L SFE+EKLPLERPKHLG
Sbjct: 299  ELSSFEMEKLPLERPKHLG 317


>ref|XP_002270047.2| PREDICTED: LOW QUALITY PROTEIN: TVP38/TMEM64 family membrane protein
            slr0305 [Vitis vinifera]
          Length = 324

 Score =  395 bits (1015), Expect = e-107
 Identities = 206/323 (63%), Positives = 231/323 (71%), Gaps = 7/323 (2%)
 Frame = +2

Query: 281  MVNSPEEESK---NAGAHAREDSEYVSLVISNDLRIGETDFLRAHSETRNKSLIWWLKAX 451
            M NS EE  K   N+G + RE+SEYV LVISN+ R+ E D L+  +ETR KS IWWLKA 
Sbjct: 1    MPNSSEETDKLNTNSGHNVREESEYVRLVISNEARLSEADILQPQAETRIKSFIWWLKAL 60

Query: 452  XXXXXXXXXXXVSLKWVAPFLLEKVLLPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPS 631
                       + LKW APF+ EK+LLPI+ WEATAFGR                  IPS
Sbjct: 61   IFCVVNVIFLLIFLKWGAPFMFEKILLPIMHWEATAFGRPVLAFVLVASLALFPVLLIPS 120

Query: 632  GPSMWLAGMIFGYGLGFVIIMVGTTIGMALPYLIGLLFRDRIH----QWLKRWPEKAAII 799
            GPSMWLAGMIFGYGLGFVIIM+GTTIGM LPYLIGLLFRDRIH    +   RW     +I
Sbjct: 121  GPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYLIGLLFRDRIHVSDXELAFRWXXXXXMI 180

Query: 800  RLAGEGSWLHQFRVVAIFRISPFPYTIFNYAIVVTNMRFWPYICGSIAGMIPEAFIYIYS 979
            RLAGEGSW HQFRVVA+FR+SPFPYTIFNYAIVVT+M FWPY+ GSIAGM+PEAFIYIYS
Sbjct: 181  RLAGEGSWFHQFRVVALFRVSPFPYTIFNYAIVVTSMTFWPYLWGSIAGMVPEAFIYIYS 240

Query: 980  GKLIRTLADVRYGNHHLTTVEIVYNAISLXXXXXXXXXXXXYAKRALNELKQRERNGESS 1159
            G+LIRTLADV+YGN HLTT+EI+YN IS             YAKRALNELK  E NGE  
Sbjct: 241  GRLIRTLADVQYGNQHLTTLEIIYNIISFIVAIITTVAFTIYAKRALNELKM-ETNGE-E 298

Query: 1160 AAIGGLDSFEIEKLPLERPKHLG 1228
            A+   L SFE+EKLPLERPKHLG
Sbjct: 299  ASTSELSSFEMEKLPLERPKHLG 321


>ref|XP_003535025.1| PREDICTED: uncharacterized protein LOC100800730 [Glycine max]
          Length = 312

 Score =  381 bits (979), Expect = e-103
 Identities = 191/305 (62%), Positives = 221/305 (72%), Gaps = 2/305 (0%)
 Frame = +2

Query: 290  SPEEESKNA--GAHAREDSEYVSLVISNDLRIGETDFLRAHSETRNKSLIWWLKAXXXXX 463
            S E+  K+A  G H R +SEYV L IS++LR+ ET+ L+  +E+R KS  WW+KA     
Sbjct: 6    SAEDLEKHAISGHHVRGNSEYVRLAISDELRVVETEMLQPLAESRMKSFRWWIKALLWCF 65

Query: 464  XXXXXXXVSLKWVAPFLLEKVLLPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPSGPSM 643
                   V LKW  PF  EKVL PI++WEATAFGR                  IPSGPSM
Sbjct: 66   VIVVLGLVILKWGVPFTFEKVLYPIMEWEATAFGRPVLALVLVASLALFPVFFIPSGPSM 125

Query: 644  WLAGMIFGYGLGFVIIMVGTTIGMALPYLIGLLFRDRIHQWLKRWPEKAAIIRLAGEGSW 823
            WLAGMIFGYGLGFVIIMVGTTIGM LPYLIGL+FRDRIHQWLKRWP+ AA+IRLAGEGSW
Sbjct: 126  WLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLIFRDRIHQWLKRWPKNAAMIRLAGEGSW 185

Query: 824  LHQFRVVAIFRISPFPYTIFNYAIVVTNMRFWPYICGSIAGMIPEAFIYIYSGKLIRTLA 1003
             HQF+VVA+FR+SPFPYTIFNYA+VVTNMRFWPY+CGSIAGM+PEAFIYIYSG+LIRTLA
Sbjct: 186  FHQFQVVALFRVSPFPYTIFNYAVVVTNMRFWPYLCGSIAGMVPEAFIYIYSGRLIRTLA 245

Query: 1004 DVRYGNHHLTTVEIVYNAISLXXXXXXXXXXXXYAKRALNELKQRERNGESSAAIGGLDS 1183
            D +YG H LTTVEI+YN IS             YAKR LNELK  E N E +A++ G  +
Sbjct: 246  DAQYGKHQLTTVEIIYNIISFIVAVVTTIAFTVYAKRTLNELKIAEAN-EEAASVSGSSN 304

Query: 1184 FEIEK 1198
             E+ K
Sbjct: 305  LEMGK 309


>ref|XP_002519396.1| conserved hypothetical protein [Ricinus communis]
            gi|223541463|gb|EEF43013.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 327

 Score =  380 bits (975), Expect = e-103
 Identities = 197/320 (61%), Positives = 217/320 (67%), Gaps = 4/320 (1%)
 Frame = +2

Query: 299  EESKNAGAHAREDSEYVSLVISNDLRIGETDFLRAHSETRN----KSLIWWLKAXXXXXX 466
            +E  N     REDSEYV LVI N    G    +       N    KS +WW KA      
Sbjct: 10   KEGANCEGRVREDSEYVRLVIPNASNPGLPQQIHILHPQPNPSSTKSFLWWTKALAFSFL 69

Query: 467  XXXXXXVSLKWVAPFLLEKVLLPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPSGPSMW 646
                     KW  PFL +KVL PILQWEATAFGR                  IPSGPSMW
Sbjct: 70   VILLLLAFFKWGLPFLFQKVLFPILQWEATAFGRPVLALVLIASLAVFPIFLIPSGPSMW 129

Query: 647  LAGMIFGYGLGFVIIMVGTTIGMALPYLIGLLFRDRIHQWLKRWPEKAAIIRLAGEGSWL 826
            LAGMIFGYG+GFVIIMVGTTIGM LPYLIGLLFRDRIHQWLKRWP+KAA+IRLAGEGSW 
Sbjct: 130  LAGMIFGYGMGFVIIMVGTTIGMILPYLIGLLFRDRIHQWLKRWPQKAAMIRLAGEGSWF 189

Query: 827  HQFRVVAIFRISPFPYTIFNYAIVVTNMRFWPYICGSIAGMIPEAFIYIYSGKLIRTLAD 1006
            HQFRVVA+FR+SPFPYTIFNYAIVVT+MRFWPY+CGSIAGM+PEAFIYIYSG+LIRT AD
Sbjct: 190  HQFRVVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSIAGMVPEAFIYIYSGRLIRTFAD 249

Query: 1007 VRYGNHHLTTVEIVYNAISLXXXXXXXXXXXXYAKRALNELKQRERNGESSAAIGGLDSF 1186
            V+YGNHHLTTVEI+YN IS             YAKRAL EL+  E   E  A+  G  S+
Sbjct: 250  VKYGNHHLTTVEIIYNVISFIIAIITTVAFTVYAKRALKELEGIETTEEVPASHQG--SY 307

Query: 1187 EIEKLPLERPKHLGTFPFPL 1246
            E+ KLPLERP  +G   F L
Sbjct: 308  EMGKLPLERPAQVGLSSFSL 327


>ref|XP_002332702.1| predicted protein [Populus trichocarpa] gi|222832956|gb|EEE71433.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  379 bits (974), Expect = e-103
 Identities = 193/325 (59%), Positives = 229/325 (70%), Gaps = 3/325 (0%)
 Frame = +2

Query: 281  MVNSPEEESKNAGA---HAREDSEYVSLVISNDLRIGETDFLRAHSETRNKSLIWWLKAX 451
            M  +  E  K++G    + REDSEYV LVIS++ R+G+ D  +  S  R K+ I W+KA 
Sbjct: 1    MAETAVESRKDSGKLEHNVREDSEYVRLVISDEPRVGDFDISQVQSRARIKAFIRWIKAL 60

Query: 452  XXXXXXXXXXXVSLKWVAPFLLEKVLLPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPS 631
                       V LKW   FL +KVLLP+++WEATAFGR                  IPS
Sbjct: 61   IWCLVIATLVLVFLKWGVSFLFDKVLLPMMEWEATAFGRPVLSLVLTASLALFPVFLIPS 120

Query: 632  GPSMWLAGMIFGYGLGFVIIMVGTTIGMALPYLIGLLFRDRIHQWLKRWPEKAAIIRLAG 811
            GPSMWLAGMIFGYG+GFVIIMVGTTIGM LPYLIGL+FRDRIHQWLKRWP+KA++IRLAG
Sbjct: 121  GPSMWLAGMIFGYGIGFVIIMVGTTIGMVLPYLIGLVFRDRIHQWLKRWPQKASMIRLAG 180

Query: 812  EGSWLHQFRVVAIFRISPFPYTIFNYAIVVTNMRFWPYICGSIAGMIPEAFIYIYSGKLI 991
            EGSW HQF+VVAIFR+SPFPYTIFNYAIVVT+MRFWPY+ GS++GM+PEAFIYIYSG+LI
Sbjct: 181  EGSWFHQFKVVAIFRVSPFPYTIFNYAIVVTSMRFWPYLWGSVSGMVPEAFIYIYSGRLI 240

Query: 992  RTLADVRYGNHHLTTVEIVYNAISLXXXXXXXXXXXXYAKRALNELKQRERNGESSAAIG 1171
            RT ADV+YGN+HLTTVEI+YN IS             YAKRAL EL++ E   E   +  
Sbjct: 241  RTFADVKYGNYHLTTVEIIYNIISFIIAIVTTVAFTIYAKRALKELERAEATEEVPPS-- 298

Query: 1172 GLDSFEIEKLPLERPKHLGTFPFPL 1246
              +S E+ KLPLERPK  G   F L
Sbjct: 299  HQESHEMGKLPLERPKRAGLSSFSL 323


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