BLASTX nr result

ID: Coptis25_contig00010824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010824
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252...   132   3e-29
ref|XP_004158546.1| PREDICTED: uncharacterized LOC101219073 [Cuc...   119   3e-25
ref|XP_004138819.1| PREDICTED: uncharacterized protein LOC101219...   119   3e-25
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_002278053.2| PREDICTED: uncharacterized protein LOC100264...   114   8e-24

>ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252260 [Vitis vinifera]
          Length = 365

 Score =  132 bits (332), Expect = 3e-29
 Identities = 59/138 (42%), Positives = 92/138 (66%)
 Frame = -3

Query: 420 PQTLSYEPNKLSEMVLQLKKMGFTPSSKAFINGLSVLCGMKKPLWDTKLEAYRSFGFSID 241
           P+TLS+  ++   ++ ++K+MGF      FI+G+  LCGMKK  W++K+  +RSFG+  +
Sbjct: 193 PRTLSFNADEFKAILKRVKEMGFDEKGMMFIHGMCALCGMKKAKWESKVSVFRSFGWGEE 252

Query: 240 EVLSMFKKHPSIMAVSVKKINLVLDFFMNTLNWTPDDFSTYPVAISYSLEKRVIPRCYVL 61
           E +++F K P  M+ S  +I   LDF +N LNW P+D   YP+ +  SLEKRV+PR  VL
Sbjct: 253 EFIALFVKQPQFMSNSETRIRKCLDFLINELNWMPEDIFKYPMVLLLSLEKRVVPRSRVL 312

Query: 60  QILLSKGLISKTRVGYAL 7
           Q+L+ KGL+++  +G AL
Sbjct: 313 QLLIGKGLVTRRSIGRAL 330


>ref|XP_004158546.1| PREDICTED: uncharacterized LOC101219073 [Cucumis sativus]
          Length = 373

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/142 (42%), Positives = 88/142 (61%)
 Frame = -3

Query: 426 KSPQTLSYEPNKLSEMVLQLKKMGFTPSSKAFINGLSVLCGMKKPLWDTKLEAYRSFGFS 247
           K P  LS +    +++V + K+ GF PSS  FINGL ++  M K  W +KL  +RS+G+S
Sbjct: 212 KRPVALSRDVKWFTDIVEKTKERGFNPSSLMFINGLCIVSSMSKDRWLSKLHIFRSYGWS 271

Query: 246 IDEVLSMFKKHPSIMAVSVKKINLVLDFFMNTLNWTPDDFSTYPVAISYSLEKRVIPRCY 67
            ++  SMF K P  M  S + +   LDFFMN  +WT ++   YP+ +  S EKRV+PR  
Sbjct: 272 DEQFQSMFLKQPCFMNRSEEGLKRALDFFMNKWDWTREEIYRYPIVLILSFEKRVMPRSS 331

Query: 66  VLQILLSKGLISKTRVGYALQV 1
           +LQ L+SKGLI +  +G AL++
Sbjct: 332 ILQHLISKGLIKRESLGMALKI 353


>ref|XP_004138819.1| PREDICTED: uncharacterized protein LOC101219073 [Cucumis sativus]
          Length = 382

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/142 (42%), Positives = 88/142 (61%)
 Frame = -3

Query: 426 KSPQTLSYEPNKLSEMVLQLKKMGFTPSSKAFINGLSVLCGMKKPLWDTKLEAYRSFGFS 247
           K P  LS +    +++V + K+ GF PSS  FINGL ++  M K  W +KL  +RS+G+S
Sbjct: 209 KRPVALSRDVKWFTDIVEKTKERGFNPSSLMFINGLCIVSSMSKDRWLSKLHIFRSYGWS 268

Query: 246 IDEVLSMFKKHPSIMAVSVKKINLVLDFFMNTLNWTPDDFSTYPVAISYSLEKRVIPRCY 67
            ++  SMF K P  M  S + +   LDFFMN  +WT ++   YP+ +  S EKRV+PR  
Sbjct: 269 DEQFQSMFLKQPCFMNRSEEGLKRALDFFMNKWDWTREEIYRYPIVLILSFEKRVMPRSS 328

Query: 66  VLQILLSKGLISKTRVGYALQV 1
           +LQ L+SKGLI +  +G AL++
Sbjct: 329 ILQHLISKGLIKRKSLGMALKI 350


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/132 (42%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
 Frame = -3

Query: 420 PQTLSYEPNKLSEMVLQLKKMGFTPSSKAFINGLSVLCGM-KKPLWDTKLEAYRSFGFSI 244
           P+ +     + SE V +++KMGF P+   F+  +  LCG   K +W+   E Y+ +G++ 
Sbjct: 226 PEAMMENHEEFSENVEEVRKMGFDPNKSTFVLAVHALCGKCNKSIWERCFEVYKRWGWTK 285

Query: 243 DEVLSMFKKHPSIMAVSVKKINLVLDFFMNTLNWTPDDFSTYPVAISYSLEKRVIPRCYV 64
           D++LS F+KHP  M +S KKI   LDFF+N + W   +    PV +  SLEKR+IPRC V
Sbjct: 286 DDILSAFRKHPHCMMLSEKKIMKGLDFFVNKMGWPSKEIVHCPVILFLSLEKRIIPRCKV 345

Query: 63  LQILLSKGLISK 28
           +Q+L SKGLI K
Sbjct: 346 IQVLWSKGLIKK 357


>ref|XP_002278053.2| PREDICTED: uncharacterized protein LOC100264327 [Vitis vinifera]
          Length = 390

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/129 (42%), Positives = 78/129 (60%)
 Frame = -3

Query: 414 TLSYEPNKLSEMVLQLKKMGFTPSSKAFINGLSVLCGMKKPLWDTKLEAYRSFGFSIDEV 235
           T+    +K SE V ++ +MGF P   AF+N L  +C   +  W  K+E YR +G+S DE+
Sbjct: 214 TICQRSDKFSENVKKVVEMGFNPLKFAFVNALQAVCQTTESTWQQKMEMYRRWGWSEDEI 273

Query: 234 LSMFKKHPSIMAVSVKKINLVLDFFMNTLNWTPDDFSTYPVAISYSLEKRVIPRCYVLQI 55
           LS F+  P  M +S KK+  VLDF +N + W P   +  P+AI  + EKRV PRC V+++
Sbjct: 274 LSAFRNRPQCMQLSEKKVTKVLDFLVNKMGWRPAVVARAPIAICLNFEKRVAPRCSVVKV 333

Query: 54  LLSKGLISK 28
           L  KGLI K
Sbjct: 334 LSLKGLIKK 342


Top