BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010814
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319912.1| predicted protein [Populus trichocarpa] gi|3...    70   2e-10
ref|XP_003555873.1| PREDICTED: lipoyl synthase, chloroplastic-li...    67   1e-09
ref|XP_002873359.1| hypothetical protein ARALYDRAFT_325438 [Arab...    67   2e-09
emb|CAC08341.1| lipoic acid synthase-like protein [Arabidopsis t...    67   2e-09
ref|NP_568196.1| lipoyl synthase [Arabidopsis thaliana] gi|30819...    67   2e-09

>ref|XP_002319912.1| predicted protein [Populus trichocarpa]
           gi|308191445|sp|B9I666.1|LISC1_POPTR RecName:
           Full=Lipoyl synthase 1, chloroplastic; AltName:
           Full=Lipoate synthase 1; Short=LS 1; Short=Lip-syn 1;
           AltName: Full=Lipoate synthase, plastidial 1;
           Short=LIP1p 1; AltName: Full=Lipoic acid synthase 1;
           Flags: Precursor gi|222858288|gb|EEE95835.1| predicted
           protein [Populus trichocarpa]
          Length = 376

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 10/84 (11%)
 Frame = -2

Query: 222 SLTKPITIPTHSKPKSLIHYYS-RPTRINIVGAEAVDYTYP---------GGGMGVHTGR 73
           SL+ PI  P  SK   L  Y   R   ++   +  +D  +P         GG MG +TGR
Sbjct: 12  SLSIPIPQPPKSKSSFLCSYSKIRCESVDYPSSSKIDAKHPQISSINSNGGGKMGSYTGR 71

Query: 72  DPNVKKPAWLRQKAPQGERFSEVK 1
           DPNVKKP WLRQKAPQGER+ EVK
Sbjct: 72  DPNVKKPEWLRQKAPQGERYDEVK 95


>ref|XP_003555873.1| PREDICTED: lipoyl synthase, chloroplastic-like [Glycine max]
          Length = 364

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
 Frame = -2

Query: 222 SLTKPITIPTHSKPKSLIHYYSRPT-RI-----NIVGAEAVDYTYPGGGMGVHTGRDPNV 61
           SL  P +I T S P    H ++ P+ RI     ++   + V   YPGG +G HTGRDPN 
Sbjct: 5   SLYTPPSI-TFSTPSPKRHRFAPPSWRIRCDASSVSVEQKVVGPYPGG-LGPHTGRDPNA 62

Query: 60  KKPAWLRQKAPQGERFSEVK 1
           KKP WLRQKAPQGERF E+K
Sbjct: 63  KKPEWLRQKAPQGERFQEIK 82


>ref|XP_002873359.1| hypothetical protein ARALYDRAFT_325438 [Arabidopsis lyrata subsp.
           lyrata] gi|297319196|gb|EFH49618.1| hypothetical protein
           ARALYDRAFT_325438 [Arabidopsis lyrata subsp. lyrata]
          Length = 477

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/38 (84%), Positives = 32/38 (84%), Gaps = 2/38 (5%)
 Frame = -2

Query: 108 YPGG--GMGVHTGRDPNVKKPAWLRQKAPQGERFSEVK 1
           YPGG   MG  TGRDPNVKKPAWLRQKAPQGERF EVK
Sbjct: 22  YPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVK 59


>emb|CAC08341.1| lipoic acid synthase-like protein [Arabidopsis thaliana]
          Length = 477

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/38 (84%), Positives = 32/38 (84%), Gaps = 2/38 (5%)
 Frame = -2

Query: 108 YPGG--GMGVHTGRDPNVKKPAWLRQKAPQGERFSEVK 1
           YPGG   MG  TGRDPNVKKPAWLRQKAPQGERF EVK
Sbjct: 22  YPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVK 59


>ref|NP_568196.1| lipoyl synthase [Arabidopsis thaliana]
           gi|308191548|sp|Q8LEE8.2|LISC_ARATH RecName: Full=Lipoyl
           synthase, chloroplastic; AltName: Full=Lipoate synthase;
           Short=LS; Short=Lip-syn; AltName: Full=Lipoate synthase,
           plastidial; Short=LIP1p; AltName: Full=Lipoic acid
           synthase; Flags: Precursor gi|20373023|dbj|BAB91180.1|
           lipoic acid synthase [Arabidopsis thaliana]
           gi|98960967|gb|ABF58967.1| At5g08415 [Arabidopsis
           thaliana] gi|332003915|gb|AED91298.1| lipoyl synthase
           [Arabidopsis thaliana]
          Length = 394

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/38 (84%), Positives = 32/38 (84%), Gaps = 2/38 (5%)
 Frame = -2

Query: 108 YPGG--GMGVHTGRDPNVKKPAWLRQKAPQGERFSEVK 1
           YPGG   MG  TGRDPNVKKPAWLRQKAPQGERF EVK
Sbjct: 78  YPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVK 115