BLASTX nr result

ID: Coptis25_contig00010812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010812
         (1650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272701.1| PREDICTED: aminomethyltransferase, mitochond...   746   0.0  
gb|ADN34064.1| aminomethyltransferase [Cucumis melo subsp. melo]      733   0.0  
gb|AFK43189.1| unknown [Lotus japonicus]                              732   0.0  
sp|P54260.1|GCST_SOLTU RecName: Full=Aminomethyltransferase, mit...   731   0.0  
ref|XP_004145120.1| PREDICTED: aminomethyltransferase, mitochond...   730   0.0  

>ref|XP_002272701.1| PREDICTED: aminomethyltransferase, mitochondrial [Vitis vinifera]
          Length = 408

 Score =  746 bits (1926), Expect = 0.0
 Identities = 358/408 (87%), Positives = 386/408 (94%)
 Frame = -1

Query: 1338 MRGGGLWQLGQSITRRLAQTDKKVVARRYFASEAELKKTALYDFHVANGGKMVPFAGWSM 1159
            MRGGGLWQLGQSITRRLAQ DKK VARR FASEAELKKT LYDFH+ANGGKMVPFAGWSM
Sbjct: 1    MRGGGLWQLGQSITRRLAQADKKAVARRCFASEAELKKTVLYDFHIANGGKMVPFAGWSM 60

Query: 1158 PIQYKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDCIPFLETLVIGDIAGLAPGTGTLS 979
            PIQYKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDCIPFLE LVI D+AGLAPGTGTL+
Sbjct: 61   PIQYKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDCIPFLEKLVIADVAGLAPGTGTLT 120

Query: 978  VLTNEKGGAIDDTVITKVKDDHIYLVVNAGCRDKDLDHIGGHMKAFQAKGGDVSWHIHDE 799
            V TNEKGGAIDD+VITKVKD+HIYLVVNAGCRDKDL HI  HMKA+++KGGDVSWHIHDE
Sbjct: 121  VFTNEKGGAIDDSVITKVKDNHIYLVVNAGCRDKDLAHIEEHMKAYKSKGGDVSWHIHDE 180

Query: 798  RSLLALQGPLAAPVLQHLTKDDLSKVYFGEFRMLDINGVHCYITRTGYTGEDGFEISVPS 619
            RSLLALQGPLAAPVLQHLTK+DLSK++FGEF++LDING  C++TRTGYTGEDGFEISVPS
Sbjct: 181  RSLLALQGPLAAPVLQHLTKEDLSKLFFGEFQILDINGATCFLTRTGYTGEDGFEISVPS 240

Query: 618  ENALDLTKAILEKSEEKIRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKR 439
            ENA+DL KAILEKSE K+RLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKR
Sbjct: 241  ENAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKR 300

Query: 438  RRAEGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRTHCEILDGEGKSLGEVTSGGFSPC 259
            RRAEGGFLGAEVILKQ+EEGP +RRVGFFSSGPP R+H EI D +G ++GE+TSGGFSPC
Sbjct: 301  RRAEGGFLGAEVILKQLEEGPSVRRVGFFSSGPPARSHSEIQDDKGNNIGEITSGGFSPC 360

Query: 258  LKKNIGMGYVKSGSHKAGTKVNVVIRGKSYDGVVTKMPFVPSKYYKPT 115
            LKKNIGMGYVKSGSHKAGTKV ++IRGK YDGVVTKMPFVP+KYYKP+
Sbjct: 361  LKKNIGMGYVKSGSHKAGTKVKILIRGKPYDGVVTKMPFVPTKYYKPS 408


>gb|ADN34064.1| aminomethyltransferase [Cucumis melo subsp. melo]
          Length = 407

 Score =  733 bits (1891), Expect = 0.0
 Identities = 351/405 (86%), Positives = 380/405 (93%)
 Frame = -1

Query: 1329 GGLWQLGQSITRRLAQTDKKVVARRYFASEAELKKTALYDFHVANGGKMVPFAGWSMPIQ 1150
            GGLWQLGQSITRRLAQTDKK V RR+F++E+ELKKT LYDFHV +GGKMVPFAGWSMPIQ
Sbjct: 3    GGLWQLGQSITRRLAQTDKKTVGRRFFSAESELKKTVLYDFHVTHGGKMVPFAGWSMPIQ 62

Query: 1149 YKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDCIPFLETLVIGDIAGLAPGTGTLSVLT 970
            YKDSIMDSTVNCR+NG LFDVSHMCGLSLKGKD IPFLE LV+ D+AGLAPGTGTL+V T
Sbjct: 63   YKDSIMDSTVNCRQNGGLFDVSHMCGLSLKGKDSIPFLEKLVVADVAGLAPGTGTLTVFT 122

Query: 969  NEKGGAIDDTVITKVKDDHIYLVVNAGCRDKDLDHIGGHMKAFQAKGGDVSWHIHDERSL 790
            NEKGGAIDD+VITKV DDHIYLVVNAGCRDKDL HI  HMKAF+AKGGDVSWHIHDERSL
Sbjct: 123  NEKGGAIDDSVITKVTDDHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSL 182

Query: 789  LALQGPLAAPVLQHLTKDDLSKVYFGEFRMLDINGVHCYITRTGYTGEDGFEISVPSENA 610
            LALQGPLAAPVLQ+LTKDDLSK+YFGEFR+LDING  C++TRTGYTGEDGFEISVPSENA
Sbjct: 183  LALQGPLAAPVLQYLTKDDLSKLYFGEFRILDINGARCFLTRTGYTGEDGFEISVPSENA 242

Query: 609  LDLTKAILEKSEEKIRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRA 430
            LDL KAILEKSE K+RLTGLGARDSLRLEAGLCLYGNDMEQH+TPVEAGLTWAIGKRRRA
Sbjct: 243  LDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHITPVEAGLTWAIGKRRRA 302

Query: 429  EGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRTHCEILDGEGKSLGEVTSGGFSPCLKK 250
            EGGFLGAEVILKQ+E+GP IRRVGFFSSGPP R+H EI +  GK++GEVTSGGFSPCLKK
Sbjct: 303  EGGFLGAEVILKQLEDGPAIRRVGFFSSGPPARSHSEIQNEGGKNIGEVTSGGFSPCLKK 362

Query: 249  NIGMGYVKSGSHKAGTKVNVVIRGKSYDGVVTKMPFVPSKYYKPT 115
            NI MGYVKSGSHKAGTKV +++RGK+YDGVVTKMPFVP+KYYKPT
Sbjct: 363  NIAMGYVKSGSHKAGTKVKIIVRGKAYDGVVTKMPFVPTKYYKPT 407


>gb|AFK43189.1| unknown [Lotus japonicus]
          Length = 407

 Score =  732 bits (1889), Expect = 0.0
 Identities = 355/405 (87%), Positives = 376/405 (92%)
 Frame = -1

Query: 1329 GGLWQLGQSITRRLAQTDKKVVARRYFASEAELKKTALYDFHVANGGKMVPFAGWSMPIQ 1150
            GGLWQLGQSITRRL Q DKK VA RYFASEAELKKTALYDFHV NGGKMVPFAGWSMPIQ
Sbjct: 3    GGLWQLGQSITRRLTQGDKKAVACRYFASEAELKKTALYDFHVVNGGKMVPFAGWSMPIQ 62

Query: 1149 YKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDCIPFLETLVIGDIAGLAPGTGTLSVLT 970
            YKDSIMDST+NCRENGSLFDVSHMCGLSLKGKD +PFLE LVI D+A LAPGTG+L+V T
Sbjct: 63   YKDSIMDSTLNCRENGSLFDVSHMCGLSLKGKDAVPFLEKLVIADVASLAPGTGSLTVFT 122

Query: 969  NEKGGAIDDTVITKVKDDHIYLVVNAGCRDKDLDHIGGHMKAFQAKGGDVSWHIHDERSL 790
            NEKGGAIDD+VITKV DDHIYLVVNAGCRDKDL HI  HMKAF+AKGGDVSWHIHDERSL
Sbjct: 123  NEKGGAIDDSVITKVADDHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSL 182

Query: 789  LALQGPLAAPVLQHLTKDDLSKVYFGEFRMLDINGVHCYITRTGYTGEDGFEISVPSENA 610
            LALQGPLA PVLQHLTKDDLSK YFGEFR+LDING  C++TRTGYTGEDGFEISVPSENA
Sbjct: 183  LALQGPLAGPVLQHLTKDDLSKFYFGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSENA 242

Query: 609  LDLTKAILEKSEEKIRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRA 430
            LDLTKAILEKSE KIRLTGLGARDSLRLEAGLCLYGNDMEQH+TPVEAGLTWAIGKRRRA
Sbjct: 243  LDLTKAILEKSEGKIRLTGLGARDSLRLEAGLCLYGNDMEQHITPVEAGLTWAIGKRRRA 302

Query: 429  EGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRTHCEILDGEGKSLGEVTSGGFSPCLKK 250
            EGGFLGAEVILKQ+ EGPKIRRVGFFSSGPPPR+H E+ D  G ++GEVTSGGFSPCLKK
Sbjct: 303  EGGFLGAEVILKQLAEGPKIRRVGFFSSGPPPRSHSEVQDEGGNNIGEVTSGGFSPCLKK 362

Query: 249  NIGMGYVKSGSHKAGTKVNVVIRGKSYDGVVTKMPFVPSKYYKPT 115
            NI MGYVKSG HKAGTKV ++IRGK+ +GVVTKMPFVP+KYYKPT
Sbjct: 363  NIAMGYVKSGLHKAGTKVKIIIRGKANEGVVTKMPFVPTKYYKPT 407


>sp|P54260.1|GCST_SOLTU RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
            Full=Glycine cleavage system T protein; Short=GCVT;
            Flags: Precursor gi|438254|emb|CAA81081.1| T-protein
            [Solanum tuberosum]
          Length = 406

 Score =  731 bits (1886), Expect = 0.0
 Identities = 351/404 (86%), Positives = 378/404 (93%)
 Frame = -1

Query: 1329 GGLWQLGQSITRRLAQTDKKVVARRYFASEAELKKTALYDFHVANGGKMVPFAGWSMPIQ 1150
            GGLWQLGQSITRRLAQ DKK + RR FAS+A+LKKT LYDFHV NGGKMVPFAGWSMPIQ
Sbjct: 3    GGLWQLGQSITRRLAQADKKTIGRRCFASDADLKKTVLYDFHVVNGGKMVPFAGWSMPIQ 62

Query: 1149 YKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDCIPFLETLVIGDIAGLAPGTGTLSVLT 970
            YKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKD IPFLE LVI D+AGLAPGTG+L+V T
Sbjct: 63   YKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDTIPFLEKLVIADVAGLAPGTGSLTVFT 122

Query: 969  NEKGGAIDDTVITKVKDDHIYLVVNAGCRDKDLDHIGGHMKAFQAKGGDVSWHIHDERSL 790
            NEKGGAIDD+V+TKV +DHIYLVVNAGCRDKDL HI  HMK+F++KGGDVSWHIHDERSL
Sbjct: 123  NEKGGAIDDSVVTKVTNDHIYLVVNAGCRDKDLAHIEEHMKSFKSKGGDVSWHIHDERSL 182

Query: 789  LALQGPLAAPVLQHLTKDDLSKVYFGEFRMLDINGVHCYITRTGYTGEDGFEISVPSENA 610
            LALQGPLAAPVLQ+LTKDDLSK+YFGEFR+LDING  C++TRTGYTGEDGFEISVPSENA
Sbjct: 183  LALQGPLAAPVLQYLTKDDLSKMYFGEFRVLDINGAPCFLTRTGYTGEDGFEISVPSENA 242

Query: 609  LDLTKAILEKSEEKIRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRA 430
            LDL KA+LEKSE KIRLTGLGARDSLRLEAGLCLYGNDMEQH TPVEAGLTWAIGKRRRA
Sbjct: 243  LDLAKALLEKSEGKIRLTGLGARDSLRLEAGLCLYGNDMEQHTTPVEAGLTWAIGKRRRA 302

Query: 429  EGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRTHCEILDGEGKSLGEVTSGGFSPCLKK 250
            EGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPR+H EI D  G+++GE+TSGGFSPCLKK
Sbjct: 303  EGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRSHSEIQDSNGQNIGEITSGGFSPCLKK 362

Query: 249  NIGMGYVKSGSHKAGTKVNVVIRGKSYDGVVTKMPFVPSKYYKP 118
            NI MGYVK+G+HKAGT V +VIRGKSYDGVVTKMPFVP+KYYKP
Sbjct: 363  NIAMGYVKTGNHKAGTNVKIVIRGKSYDGVVTKMPFVPTKYYKP 406


>ref|XP_004145120.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Cucumis
            sativus] gi|449472329|ref|XP_004153559.1| PREDICTED:
            aminomethyltransferase, mitochondrial-like [Cucumis
            sativus]
          Length = 407

 Score =  730 bits (1884), Expect = 0.0
 Identities = 350/405 (86%), Positives = 379/405 (93%)
 Frame = -1

Query: 1329 GGLWQLGQSITRRLAQTDKKVVARRYFASEAELKKTALYDFHVANGGKMVPFAGWSMPIQ 1150
            GGLWQLGQSITRRLAQTDKK V RR+F++E+ELKKT LYDFHV +GGKMVPFAGWSMPIQ
Sbjct: 3    GGLWQLGQSITRRLAQTDKKAVGRRFFSAESELKKTVLYDFHVTHGGKMVPFAGWSMPIQ 62

Query: 1149 YKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDCIPFLETLVIGDIAGLAPGTGTLSVLT 970
            YKDSIMDSTVNCR+NG LFDVSHMCGLSLKGKD I FLE LV+ D+AGLAPGTGTL+V T
Sbjct: 63   YKDSIMDSTVNCRQNGGLFDVSHMCGLSLKGKDSIAFLEKLVVADVAGLAPGTGTLTVFT 122

Query: 969  NEKGGAIDDTVITKVKDDHIYLVVNAGCRDKDLDHIGGHMKAFQAKGGDVSWHIHDERSL 790
            NEKGGAIDD+VITKV DDHIYLVVNAGCRDKDL HI  HMKAF+AKGGDVSWHIHDERSL
Sbjct: 123  NEKGGAIDDSVITKVTDDHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSL 182

Query: 789  LALQGPLAAPVLQHLTKDDLSKVYFGEFRMLDINGVHCYITRTGYTGEDGFEISVPSENA 610
            LALQGPLAAPVLQ+LTKDDLSK+YFGEFR+LDING  C++TRTGYTGEDGFEISVPSENA
Sbjct: 183  LALQGPLAAPVLQYLTKDDLSKLYFGEFRILDINGARCFLTRTGYTGEDGFEISVPSENA 242

Query: 609  LDLTKAILEKSEEKIRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRA 430
            LDL KAILEKSE K+RLTGLGARDSLRLEAGLCLYGNDMEQH TPVEAGLTWAIGKRRRA
Sbjct: 243  LDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHTTPVEAGLTWAIGKRRRA 302

Query: 429  EGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRTHCEILDGEGKSLGEVTSGGFSPCLKK 250
            EGGFLGAEVILKQ+EEGP IRRVGFFSSGPP R+H EI + +GK++GEVTSGGFSPCLKK
Sbjct: 303  EGGFLGAEVILKQLEEGPAIRRVGFFSSGPPARSHSEIQNEDGKNIGEVTSGGFSPCLKK 362

Query: 249  NIGMGYVKSGSHKAGTKVNVVIRGKSYDGVVTKMPFVPSKYYKPT 115
            NI MGYVKSG+HKAGTKV +++RGK+YDGVVTKMPFVP+KYYKPT
Sbjct: 363  NIAMGYVKSGTHKAGTKVKIIVRGKAYDGVVTKMPFVPTKYYKPT 407


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