BLASTX nr result

ID: Coptis25_contig00010811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010811
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278478.1| PREDICTED: uncharacterized protein LOC100255...    70   2e-10

>ref|XP_002278478.1| PREDICTED: uncharacterized protein LOC100255467 [Vitis vinifera]
          Length = 485

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 48/133 (36%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
 Frame = +3

Query: 174 MGYSTKTKNNNEGWGLGLFLVFFPNDGDDSSKYLDKKKMLXXXXXXXXXXXXXXXXXNFN 353
           M  S K K+++EGWG+G  LVFFP D       ++KKK L                   +
Sbjct: 1   MSVSAKAKSSSEGWGMGFLLVFFPED----DPIINKKKNLFSSSSSSSSSSLKSTTRIHS 56

Query: 354 DQLFTKAQSTISICAXXXXXXXXXXXXSNFD-HPISSNPTRVVVPRRWLSESRFNKYVSK 530
             +FT+AQSTISICA            S F+   I+++    +  RRWLSE       + 
Sbjct: 57  SNIFTRAQSTISICALIVFITLLLFTLSTFEPTTIAASSPHSIASRRWLSEKSTASKSNS 116

Query: 531 NKSCPSSHALQGM 569
            KS  SS ALQGM
Sbjct: 117 LKS--SSFALQGM 127


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