BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010810
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142652.1| PREDICTED: eukaryotic translation initiation...   194   e-121
ref|XP_002284533.1| PREDICTED: eukaryotic translation initiation...   188   e-118
gb|ACN40777.1| unknown [Picea sitchensis]                             184   e-118
gb|ABR16601.1| unknown [Picea sitchensis]                             184   e-118
gb|ACN28978.1| unknown [Zea mays] gi|414588918|tpg|DAA39489.1| T...   179   e-117

>ref|XP_004142652.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           E-like [Cucumis sativus]
          Length = 437

 Score =  194 bits (494), Expect(3) = e-121
 Identities = 96/115 (83%), Positives = 106/115 (92%)
 Frame = +2

Query: 2   LVFPLLEFLQERSLYPDGQILKAKIQLLNKTNMVDYAMDIHKSLYKTEDVPQDMIDRRAE 181
           LVFPLLEFLQER LYPD QILKAKI+LLNKTNMVDYAMDIHKSLY TEDVPQDM+DRRAE
Sbjct: 18  LVFPLLEFLQERQLYPDEQILKAKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVDRRAE 77

Query: 182 VVARLKSLEESAAPLIQFLQDPESLKEFRADKQYNLHMLLENYKIGPDQIEALYQ 346
           VVARLK+LEESAAPL+ FLQ+P +++E RADKQYNL ML + Y+IGPDQIEALYQ
Sbjct: 78  VVARLKALEESAAPLVAFLQNPAAVQELRADKQYNLQMLNDRYQIGPDQIEALYQ 132



 Score =  156 bits (395), Expect(3) = e-121
 Identities = 80/134 (59%), Positives = 89/134 (66%)
 Frame = +3

Query: 408 AKFQFECGNYSGAADFLYQYRALCTNSDRNLSALWGKLAXXXXXXXXXXXXXXXXXXXXX 587
           AKFQFECGNYSGAAD+LYQYRALCTNS+R+LSALWGKLA                     
Sbjct: 134 AKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEVLMQNWDIAVEEL------ 187

Query: 588 XXXXXXXXXXXXXXXXXNHLREIIDAKNFQSPLNQLQSRIWLMHWSLFIFFNHEGGRNGI 767
                            N L+EIID+KNF SP+NQ+QSRIWLMHWSLFIFFNH+ GR  I
Sbjct: 188 -----------------NRLKEIIDSKNFSSPMNQVQSRIWLMHWSLFIFFNHDNGRTQI 230

Query: 768 IDLFLYDRYLNAIQ 809
           IDLF  D+YLNAIQ
Sbjct: 231 IDLFNQDKYLNAIQ 244



 Score =  134 bits (336), Expect(3) = e-121
 Identities = 61/74 (82%), Positives = 69/74 (93%)
 Frame = +2

Query: 860  RYLNAIQTNAPHLLRYLATALIITKKRRPQLKEFIKVIQQEQYSYKDPITEFLQCLYVNY 1039
            +YLNAIQTNAPHLLRYLATA I+ K+RRPQ K+FIKVIQQEQ SYKDPITEFL C+YVNY
Sbjct: 238  KYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLTCVYVNY 297

Query: 1040 DFDGAQQKLRECED 1081
            DFDGAQ+K+RECE+
Sbjct: 298  DFDGAQKKMRECEE 311


>ref|XP_002284533.1| PREDICTED: eukaryotic translation initiation factor 3 subunit E
           [Vitis vinifera]
          Length = 437

 Score =  188 bits (477), Expect(3) = e-118
 Identities = 92/115 (80%), Positives = 105/115 (91%)
 Frame = +2

Query: 2   LVFPLLEFLQERSLYPDGQILKAKIQLLNKTNMVDYAMDIHKSLYKTEDVPQDMIDRRAE 181
           LVFPLLEFLQER LYPD QILKAKI+LLNKTNMVDYAMDIHKSLY TEDVPQDM++RRAE
Sbjct: 18  LVFPLLEFLQERQLYPDEQILKAKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRAE 77

Query: 182 VVARLKSLEESAAPLIQFLQDPESLKEFRADKQYNLHMLLENYKIGPDQIEALYQ 346
           VVARLK+LEE+AAPL+ FLQ+P +++E RADKQYNL ML + Y+IG +QIEALYQ
Sbjct: 78  VVARLKALEEAAAPLVSFLQNPNAVQELRADKQYNLQMLNDRYQIGQEQIEALYQ 132



 Score =  154 bits (388), Expect(3) = e-118
 Identities = 79/134 (58%), Positives = 89/134 (66%)
 Frame = +3

Query: 408 AKFQFECGNYSGAADFLYQYRALCTNSDRNLSALWGKLAXXXXXXXXXXXXXXXXXXXXX 587
           AKFQFECGNYSGAAD+LYQYRALCTNS+R+LSALWGKLA                     
Sbjct: 134 AKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNWDTAFEEL------ 187

Query: 588 XXXXXXXXXXXXXXXXXNHLREIIDAKNFQSPLNQLQSRIWLMHWSLFIFFNHEGGRNGI 767
                            N L+EIID+K++ SPLNQ+QSRIWLMHWSLFIFFNH+ GR  I
Sbjct: 188 -----------------NRLKEIIDSKSYASPLNQVQSRIWLMHWSLFIFFNHDNGRTHI 230

Query: 768 IDLFLYDRYLNAIQ 809
           IDLF  D+YLNAIQ
Sbjct: 231 IDLFNQDKYLNAIQ 244



 Score =  133 bits (334), Expect(3) = e-118
 Identities = 60/74 (81%), Positives = 70/74 (94%)
 Frame = +2

Query: 860  RYLNAIQTNAPHLLRYLATALIITKKRRPQLKEFIKVIQQEQYSYKDPITEFLQCLYVNY 1039
            +YLNAIQTNAPHLLRYLATALI+ K+RR Q K+FIKVIQQEQY++KDPITEFL C+YVNY
Sbjct: 238  KYLNAIQTNAPHLLRYLATALIVNKRRRTQFKDFIKVIQQEQYAFKDPITEFLACVYVNY 297

Query: 1040 DFDGAQQKLRECED 1081
            DFDGAQ+K+RECE+
Sbjct: 298  DFDGAQKKMRECEE 311


>gb|ACN40777.1| unknown [Picea sitchensis]
          Length = 441

 Score =  184 bits (467), Expect(3) = e-118
 Identities = 91/115 (79%), Positives = 102/115 (88%)
 Frame = +2

Query: 2   LVFPLLEFLQERSLYPDGQILKAKIQLLNKTNMVDYAMDIHKSLYKTEDVPQDMIDRRAE 181
           LVFPLLEFLQE+ LYPD QILK+KI LL+KTNMVDYAMDIHKSLY+TEDVPQDM DRR E
Sbjct: 18  LVFPLLEFLQEKQLYPDDQILKSKIDLLSKTNMVDYAMDIHKSLYRTEDVPQDMTDRRVE 77

Query: 182 VVARLKSLEESAAPLIQFLQDPESLKEFRADKQYNLHMLLENYKIGPDQIEALYQ 346
           VVARLKSLEE AAPLI FLQ+P  ++E R+DKQYNL ML + Y+IGP+QIEALYQ
Sbjct: 78  VVARLKSLEEMAAPLISFLQNPSLVQELRSDKQYNLQMLNDRYQIGPNQIEALYQ 132



 Score =  162 bits (410), Expect(3) = e-118
 Identities = 83/134 (61%), Positives = 88/134 (65%)
 Frame = +3

Query: 408 AKFQFECGNYSGAADFLYQYRALCTNSDRNLSALWGKLAXXXXXXXXXXXXXXXXXXXXX 587
           AKFQFECGNYSGAADFLYQYR  CTNSDR+LSALWGKLA                     
Sbjct: 134 AKFQFECGNYSGAADFLYQYRTFCTNSDRSLSALWGKLAAEILMQNWDIALEEL------ 187

Query: 588 XXXXXXXXXXXXXXXXXNHLREIIDAKNFQSPLNQLQSRIWLMHWSLFIFFNHEGGRNGI 767
                            N L+EIID+KNF SPLNQLQ+R WLMHWSLFIFFNHE GRNGI
Sbjct: 188 -----------------NRLKEIIDSKNFSSPLNQLQNRTWLMHWSLFIFFNHENGRNGI 230

Query: 768 IDLFLYDRYLNAIQ 809
           IDLF  +RYLNAIQ
Sbjct: 231 IDLFFQERYLNAIQ 244



 Score =  128 bits (321), Expect(3) = e-118
 Identities = 60/73 (82%), Positives = 67/73 (91%)
 Frame = +2

Query: 860  RYLNAIQTNAPHLLRYLATALIITKKRRPQLKEFIKVIQQEQYSYKDPITEFLQCLYVNY 1039
            RYLNAIQTNA HLLRYLATA+++ K+RR  LKE IKVIQQEQY+YKDPITEFL+CLYVNY
Sbjct: 238  RYLNAIQTNAHHLLRYLATAVVVNKRRRNMLKELIKVIQQEQYTYKDPITEFLECLYVNY 297

Query: 1040 DFDGAQQKLRECE 1078
            DF+GAQQKL ECE
Sbjct: 298  DFEGAQQKLVECE 310


>gb|ABR16601.1| unknown [Picea sitchensis]
          Length = 409

 Score =  184 bits (467), Expect(3) = e-118
 Identities = 91/115 (79%), Positives = 102/115 (88%)
 Frame = +2

Query: 2   LVFPLLEFLQERSLYPDGQILKAKIQLLNKTNMVDYAMDIHKSLYKTEDVPQDMIDRRAE 181
           LVFPLLEFLQE+ LYPD QILK+KI LL+KTNMVDYAMDIHKSLY+TEDVPQDM DRR E
Sbjct: 18  LVFPLLEFLQEKQLYPDDQILKSKIDLLSKTNMVDYAMDIHKSLYRTEDVPQDMTDRRVE 77

Query: 182 VVARLKSLEESAAPLIQFLQDPESLKEFRADKQYNLHMLLENYKIGPDQIEALYQ 346
           VVARLKSLEE AAPLI FLQ+P  ++E R+DKQYNL ML + Y+IGP+QIEALYQ
Sbjct: 78  VVARLKSLEEMAAPLISFLQNPSLVQELRSDKQYNLQMLNDRYQIGPNQIEALYQ 132



 Score =  162 bits (410), Expect(3) = e-118
 Identities = 83/134 (61%), Positives = 88/134 (65%)
 Frame = +3

Query: 408 AKFQFECGNYSGAADFLYQYRALCTNSDRNLSALWGKLAXXXXXXXXXXXXXXXXXXXXX 587
           AKFQFECGNYSGAADFLYQYR  CTNSDR+LSALWGKLA                     
Sbjct: 134 AKFQFECGNYSGAADFLYQYRTFCTNSDRSLSALWGKLAAEILMQNWDIALEEL------ 187

Query: 588 XXXXXXXXXXXXXXXXXNHLREIIDAKNFQSPLNQLQSRIWLMHWSLFIFFNHEGGRNGI 767
                            N L+EIID+KNF SPLNQLQ+R WLMHWSLFIFFNHE GRNGI
Sbjct: 188 -----------------NRLKEIIDSKNFSSPLNQLQNRTWLMHWSLFIFFNHENGRNGI 230

Query: 768 IDLFLYDRYLNAIQ 809
           IDLF  +RYLNAIQ
Sbjct: 231 IDLFFQERYLNAIQ 244



 Score =  128 bits (321), Expect(3) = e-118
 Identities = 60/73 (82%), Positives = 67/73 (91%)
 Frame = +2

Query: 860  RYLNAIQTNAPHLLRYLATALIITKKRRPQLKEFIKVIQQEQYSYKDPITEFLQCLYVNY 1039
            RYLNAIQTNA HLLRYLATA+++ K+RR  LKE IKVIQQEQY+YKDPITEFL+CLYVNY
Sbjct: 238  RYLNAIQTNAHHLLRYLATAVVVNKRRRNMLKELIKVIQQEQYTYKDPITEFLECLYVNY 297

Query: 1040 DFDGAQQKLRECE 1078
            DF+GAQQKL ECE
Sbjct: 298  DFEGAQQKLVECE 310


>gb|ACN28978.1| unknown [Zea mays] gi|414588918|tpg|DAA39489.1| TPA: putative
           eukaryotic translation initiation factor 3E subunit
           family protein [Zea mays]
          Length = 436

 Score =  179 bits (455), Expect(3) = e-117
 Identities = 86/115 (74%), Positives = 104/115 (90%)
 Frame = +2

Query: 2   LVFPLLEFLQERSLYPDGQILKAKIQLLNKTNMVDYAMDIHKSLYKTEDVPQDMIDRRAE 181
           LVFPLLEFLQER LY + +IL+AKI+LL+ TNMVDYAMDIHKSLY T+DVP+DM+ RRAE
Sbjct: 18  LVFPLLEFLQERQLYSESEILEAKIRLLSGTNMVDYAMDIHKSLYGTDDVPEDMVKRRAE 77

Query: 182 VVARLKSLEESAAPLIQFLQDPESLKEFRADKQYNLHMLLENYKIGPDQIEALYQ 346
           VV+RL+SLEE+AAPL+ FLQ+P+ ++EFR DKQYN+HML E Y+IGPDQIEALYQ
Sbjct: 78  VVSRLRSLEEAAAPLVAFLQNPQLVQEFRPDKQYNIHMLQERYQIGPDQIEALYQ 132



 Score =  166 bits (419), Expect(3) = e-117
 Identities = 84/134 (62%), Positives = 91/134 (67%)
 Frame = +3

Query: 408 AKFQFECGNYSGAADFLYQYRALCTNSDRNLSALWGKLAXXXXXXXXXXXXXXXXXXXXX 587
           AKFQFECGNYSGAAD+LYQYRALCTNS+RN+SALWGKLA                     
Sbjct: 134 AKFQFECGNYSGAADYLYQYRALCTNSERNVSALWGKLAAEILMQNWDVALEEL------ 187

Query: 588 XXXXXXXXXXXXXXXXXNHLREIIDAKNFQSPLNQLQSRIWLMHWSLFIFFNHEGGRNGI 767
                            N L+EIID+KNF SPLNQLQ+RIWLMHW+LFIFFNHE GRNGI
Sbjct: 188 -----------------NRLKEIIDSKNFSSPLNQLQNRIWLMHWALFIFFNHENGRNGI 230

Query: 768 IDLFLYDRYLNAIQ 809
           IDLF  DRYLNAIQ
Sbjct: 231 IDLFFQDRYLNAIQ 244



 Score =  125 bits (315), Expect(3) = e-117
 Identities = 58/73 (79%), Positives = 66/73 (90%)
 Frame = +2

Query: 860  RYLNAIQTNAPHLLRYLATALIITKKRRPQLKEFIKVIQQEQYSYKDPITEFLQCLYVNY 1039
            RYLNAIQTNA HL+RYLATA+++ K+RR  LKE IKVIQQE +SYKDP+TEFL+CLYVNY
Sbjct: 238  RYLNAIQTNAHHLIRYLATAVVVNKRRRNMLKELIKVIQQEHHSYKDPVTEFLECLYVNY 297

Query: 1040 DFDGAQQKLRECE 1078
            DFDGAQQKL ECE
Sbjct: 298  DFDGAQQKLIECE 310