BLASTX nr result

ID: Coptis25_contig00010798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010798
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27714.3| unnamed protein product [Vitis vinifera]               59   5e-17
ref|XP_002318306.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-17
ref|XP_002269418.2| PREDICTED: serine palmitoyltransferase 1 [Vi...    59   5e-17
dbj|BAG68483.1| serine palmitoyltransferase subunit I [Nicotiana...    62   3e-16
ref|XP_003589146.1| Serine palmitoyltransferase [Medicago trunca...    58   7e-15

>emb|CBI27714.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score = 59.3 bits (142), Expect(2) = 5e-17
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = +2

Query: 239 LEKITQENKRASKIRRYIVVEAIYQNSGQIAP 334
           LEKIT ENKRA K+RRYIVVEA+YQNSGQIAP
Sbjct: 232 LEKITLENKRAKKLRRYIVVEAVYQNSGQIAP 263



 Score = 53.9 bits (128), Expect(2) = 5e-17
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +1

Query: 427 IRLKEKFCFRVLLDESNSFGVLGSSGRGL 513
           IRLKEK+ FRVLLDESNSFGVLGS+GRGL
Sbjct: 268 IRLKEKYRFRVLLDESNSFGVLGSTGRGL 296


>ref|XP_002318306.1| predicted protein [Populus trichocarpa] gi|222858979|gb|EEE96526.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score = 59.3 bits (142), Expect(2) = 5e-17
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +2

Query: 236 ALEKITQENKRASKIRRYIVVEAIYQNSGQIAP 334
           ALEKIT ENKRA ++RRYIVVEA+YQNSGQIAP
Sbjct: 231 ALEKITVENKRAKELRRYIVVEAVYQNSGQIAP 263



 Score = 53.9 bits (128), Expect(2) = 5e-17
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +1

Query: 427 IRLKEKFCFRVLLDESNSFGVLGSSGRGL 513
           IRLKEK+ FRVLLDESNSFGVLG SGRGL
Sbjct: 268 IRLKEKYLFRVLLDESNSFGVLGRSGRGL 296


>ref|XP_002269418.2| PREDICTED: serine palmitoyltransferase 1 [Vitis vinifera]
          Length = 480

 Score = 59.3 bits (142), Expect(2) = 5e-17
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = +2

Query: 239 LEKITQENKRASKIRRYIVVEAIYQNSGQIAP 334
           LEKIT ENKRA K+RRYIVVEA+YQNSGQIAP
Sbjct: 229 LEKITLENKRAKKLRRYIVVEAVYQNSGQIAP 260



 Score = 53.9 bits (128), Expect(2) = 5e-17
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +1

Query: 427 IRLKEKFCFRVLLDESNSFGVLGSSGRGL 513
           IRLKEK+ FRVLLDESNSFGVLGS+GRGL
Sbjct: 265 IRLKEKYRFRVLLDESNSFGVLGSTGRGL 293


>dbj|BAG68483.1| serine palmitoyltransferase subunit I [Nicotiana benthamiana]
          Length = 231

 Score = 61.6 bits (148), Expect(2) = 3e-16
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +2

Query: 239 LEKITQENKRASKIRRYIVVEAIYQNSGQIAP 334
           LEKITQENKRA K+RRYIVVEA+YQNSGQ+AP
Sbjct: 124 LEKITQENKRAKKLRRYIVVEAVYQNSGQVAP 155



 Score = 48.9 bits (115), Expect(2) = 3e-16
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +1

Query: 427 IRLKEKFCFRVLLDESNSFGVLGSSGRGL 513
           I+LKEK+ FRVLLDESNS GVLG SG+GL
Sbjct: 160 IKLKEKYRFRVLLDESNSLGVLGGSGKGL 188


>ref|XP_003589146.1| Serine palmitoyltransferase [Medicago truncatula]
           gi|355478194|gb|AES59397.1| Serine palmitoyltransferase
           [Medicago truncatula]
          Length = 543

 Score = 58.2 bits (139), Expect(2) = 7e-15
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +1

Query: 427 IRLKEKFCFRVLLDESNSFGVLGSSGRGL 513
           I+LKEK+CFR+LLDESNSFGVLGSSGRGL
Sbjct: 268 IKLKEKYCFRILLDESNSFGVLGSSGRGL 296



 Score = 47.8 bits (112), Expect(2) = 7e-15
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = +2

Query: 239 LEKITQENKRASKIRRYIVVEAIYQNSGQIAP 334
           LE IT   KR   +RRYIV+EA+YQNSGQIAP
Sbjct: 232 LENITSIYKRTKNLRRYIVIEALYQNSGQIAP 263


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