BLASTX nr result
ID: Coptis25_contig00010798
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00010798 (629 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI27714.3| unnamed protein product [Vitis vinifera] 59 5e-17 ref|XP_002318306.1| predicted protein [Populus trichocarpa] gi|2... 59 5e-17 ref|XP_002269418.2| PREDICTED: serine palmitoyltransferase 1 [Vi... 59 5e-17 dbj|BAG68483.1| serine palmitoyltransferase subunit I [Nicotiana... 62 3e-16 ref|XP_003589146.1| Serine palmitoyltransferase [Medicago trunca... 58 7e-15 >emb|CBI27714.3| unnamed protein product [Vitis vinifera] Length = 483 Score = 59.3 bits (142), Expect(2) = 5e-17 Identities = 28/32 (87%), Positives = 30/32 (93%) Frame = +2 Query: 239 LEKITQENKRASKIRRYIVVEAIYQNSGQIAP 334 LEKIT ENKRA K+RRYIVVEA+YQNSGQIAP Sbjct: 232 LEKITLENKRAKKLRRYIVVEAVYQNSGQIAP 263 Score = 53.9 bits (128), Expect(2) = 5e-17 Identities = 26/29 (89%), Positives = 28/29 (96%) Frame = +1 Query: 427 IRLKEKFCFRVLLDESNSFGVLGSSGRGL 513 IRLKEK+ FRVLLDESNSFGVLGS+GRGL Sbjct: 268 IRLKEKYRFRVLLDESNSFGVLGSTGRGL 296 >ref|XP_002318306.1| predicted protein [Populus trichocarpa] gi|222858979|gb|EEE96526.1| predicted protein [Populus trichocarpa] Length = 482 Score = 59.3 bits (142), Expect(2) = 5e-17 Identities = 28/33 (84%), Positives = 31/33 (93%) Frame = +2 Query: 236 ALEKITQENKRASKIRRYIVVEAIYQNSGQIAP 334 ALEKIT ENKRA ++RRYIVVEA+YQNSGQIAP Sbjct: 231 ALEKITVENKRAKELRRYIVVEAVYQNSGQIAP 263 Score = 53.9 bits (128), Expect(2) = 5e-17 Identities = 26/29 (89%), Positives = 27/29 (93%) Frame = +1 Query: 427 IRLKEKFCFRVLLDESNSFGVLGSSGRGL 513 IRLKEK+ FRVLLDESNSFGVLG SGRGL Sbjct: 268 IRLKEKYLFRVLLDESNSFGVLGRSGRGL 296 >ref|XP_002269418.2| PREDICTED: serine palmitoyltransferase 1 [Vitis vinifera] Length = 480 Score = 59.3 bits (142), Expect(2) = 5e-17 Identities = 28/32 (87%), Positives = 30/32 (93%) Frame = +2 Query: 239 LEKITQENKRASKIRRYIVVEAIYQNSGQIAP 334 LEKIT ENKRA K+RRYIVVEA+YQNSGQIAP Sbjct: 229 LEKITLENKRAKKLRRYIVVEAVYQNSGQIAP 260 Score = 53.9 bits (128), Expect(2) = 5e-17 Identities = 26/29 (89%), Positives = 28/29 (96%) Frame = +1 Query: 427 IRLKEKFCFRVLLDESNSFGVLGSSGRGL 513 IRLKEK+ FRVLLDESNSFGVLGS+GRGL Sbjct: 265 IRLKEKYRFRVLLDESNSFGVLGSTGRGL 293 >dbj|BAG68483.1| serine palmitoyltransferase subunit I [Nicotiana benthamiana] Length = 231 Score = 61.6 bits (148), Expect(2) = 3e-16 Identities = 28/32 (87%), Positives = 31/32 (96%) Frame = +2 Query: 239 LEKITQENKRASKIRRYIVVEAIYQNSGQIAP 334 LEKITQENKRA K+RRYIVVEA+YQNSGQ+AP Sbjct: 124 LEKITQENKRAKKLRRYIVVEAVYQNSGQVAP 155 Score = 48.9 bits (115), Expect(2) = 3e-16 Identities = 23/29 (79%), Positives = 26/29 (89%) Frame = +1 Query: 427 IRLKEKFCFRVLLDESNSFGVLGSSGRGL 513 I+LKEK+ FRVLLDESNS GVLG SG+GL Sbjct: 160 IKLKEKYRFRVLLDESNSLGVLGGSGKGL 188 >ref|XP_003589146.1| Serine palmitoyltransferase [Medicago truncatula] gi|355478194|gb|AES59397.1| Serine palmitoyltransferase [Medicago truncatula] Length = 543 Score = 58.2 bits (139), Expect(2) = 7e-15 Identities = 26/29 (89%), Positives = 29/29 (100%) Frame = +1 Query: 427 IRLKEKFCFRVLLDESNSFGVLGSSGRGL 513 I+LKEK+CFR+LLDESNSFGVLGSSGRGL Sbjct: 268 IKLKEKYCFRILLDESNSFGVLGSSGRGL 296 Score = 47.8 bits (112), Expect(2) = 7e-15 Identities = 22/32 (68%), Positives = 25/32 (78%) Frame = +2 Query: 239 LEKITQENKRASKIRRYIVVEAIYQNSGQIAP 334 LE IT KR +RRYIV+EA+YQNSGQIAP Sbjct: 232 LENITSIYKRTKNLRRYIVIEALYQNSGQIAP 263