BLASTX nr result

ID: Coptis25_contig00010772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010772
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517228.1| ATP synthase epsilon chain, mitochondrial, p...   107   1e-21
ref|NP_175576.1| ATP synthase subunit epsilon [Arabidopsis thali...   106   2e-21
ref|XP_002891649.1| ATP synthase epsilon chain, mitochondrial [A...   106   2e-21
gb|ACS83605.1| ATP synthase epsilon subunit 1 [Gossypium hirsutum]    103   2e-20
emb|CAD31844.1| putative epsilon subunit of mitochondrial F1-ATP...   100   9e-20

>ref|XP_002517228.1| ATP synthase epsilon chain, mitochondrial, putative [Ricinus
           communis] gi|223543599|gb|EEF45128.1| ATP synthase
           epsilon chain, mitochondrial, putative [Ricinus
           communis]
          Length = 70

 Score =  107 bits (266), Expect = 1e-21
 Identities = 48/53 (90%), Positives = 52/53 (98%)
 Frame = +3

Query: 228 MASNAAVPFWRAAGMTYISYSNICASLVRNCLKEPHKSEAINREKVHFSVSKW 386
           MASNAAVPFWRAAGMTYI+YSNICA+LVRNCLKEPHK+EA+ REKVHFSVSKW
Sbjct: 1   MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPHKTEALTREKVHFSVSKW 53


>ref|NP_175576.1| ATP synthase subunit epsilon [Arabidopsis thaliana]
           gi|2493052|sp|Q96253.3|ATP5E_ARATH RecName: Full=ATP
           synthase subunit epsilon, mitochondrial; Short=ATPase
           subunit epsilon gi|12321688|gb|AAG50890.1|AC025294_28
           epsilon subunit of mitochondrial F1-ATPase [Arabidopsis
           thaliana] gi|1655486|dbj|BAA13602.1| epsilon subunit of
           mitochondrial F1-ATPase [Arabidopsis thaliana]
           gi|18252167|gb|AAL61916.1| epsilon subunit of
           mitochondrial F1-ATPase [Arabidopsis thaliana]
           gi|21386911|gb|AAM47859.1| epsilon subunit of
           mitochondrial F1-ATPase [Arabidopsis thaliana]
           gi|332194574|gb|AEE32695.1| ATP synthase subunit epsilon
           [Arabidopsis thaliana]
          Length = 70

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/53 (88%), Positives = 52/53 (98%)
 Frame = +3

Query: 228 MASNAAVPFWRAAGMTYISYSNICASLVRNCLKEPHKSEAINREKVHFSVSKW 386
           MASNAAVPFWRAAGMTYISYSNICA++VRNCLKEPHK+EA+ REKVHFS+SKW
Sbjct: 1   MASNAAVPFWRAAGMTYISYSNICANIVRNCLKEPHKAEALTREKVHFSLSKW 53


>ref|XP_002891649.1| ATP synthase epsilon chain, mitochondrial [Arabidopsis lyrata
           subsp. lyrata] gi|297337491|gb|EFH67908.1| ATP synthase
           epsilon chain, mitochondrial [Arabidopsis lyrata subsp.
           lyrata]
          Length = 70

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/53 (88%), Positives = 52/53 (98%)
 Frame = +3

Query: 228 MASNAAVPFWRAAGMTYISYSNICASLVRNCLKEPHKSEAINREKVHFSVSKW 386
           MASNAAVPFWRAAGMTYISYSNICA++VRNCLKEPHK+EA+ REKVHFS+SKW
Sbjct: 1   MASNAAVPFWRAAGMTYISYSNICANIVRNCLKEPHKAEALTREKVHFSLSKW 53


>gb|ACS83605.1| ATP synthase epsilon subunit 1 [Gossypium hirsutum]
          Length = 70

 Score =  103 bits (256), Expect = 2e-20
 Identities = 45/53 (84%), Positives = 52/53 (98%)
 Frame = +3

Query: 228 MASNAAVPFWRAAGMTYISYSNICASLVRNCLKEPHKSEAINREKVHFSVSKW 386
           M SNAAVPFWRAAGMTYI+YSNICA+LVRNCLKEP+K+EA++REKVHFS+SKW
Sbjct: 1   MTSNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEALSREKVHFSISKW 53


>emb|CAD31844.1| putative epsilon subunit of mitochondrial F1-ATPase [Cicer
           arietinum]
          Length = 68

 Score =  100 bits (250), Expect = 9e-20
 Identities = 44/53 (83%), Positives = 50/53 (94%)
 Frame = +3

Query: 228 MASNAAVPFWRAAGMTYISYSNICASLVRNCLKEPHKSEAINREKVHFSVSKW 386
           MAS  AVPFWRAAGMTYI+YSNICA+LVRNCLKEPHK+E ++REKVHFS+SKW
Sbjct: 1   MASTGAVPFWRAAGMTYITYSNICANLVRNCLKEPHKTEVLSREKVHFSLSKW 53


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